lawraga's protein-interaction-networks [32 articles] Export

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	Using Likelihood-Free Inference to Compare Evolutionary Dynamics of the Protein Networks of H. pylori and P. falciparum [My Copy] PLoS Computational Biology In PLoS Comput Biol, Vol. 3, No. 11. (30 November 2007), e230. by Oliver Ratmann, Ole Jørgensen, Trevor Hinkley, Michael Stumpf, Sylvia Richardson, Carsten Wiuf posted to theory protein-interaction-networks networks-analysis-engine networks machine-learning by lawraga on 2009-12-08 17:25:14 as along with 6 people TheresaNiederberger zwang xingxu hpaces Ema tresch
	The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics [My Copy] PLoS Comput Biol, Vol. 3, No. 4. (20 April 2007), e59. by Haiyuan Yu, Philip M. Kim, Emmett Sprecher, Valery Trifonov, Mark Gerstein posted to protein-interaction-networks gene-networks expression-data by lawraga on 2009-11-01 20:39:10 as along with 9 people flbarroso shung shikin jiny jfr zwang Takayuki hryk carlk
	Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (1 August 2008), e1000140. by Elena Zotenko, Julian Mestre, Dianne P. O'Leary, Teresa M. Przytycka posted to protein-interaction-networks by lawraga on 2009-09-19 18:00:22 as along with 12 people and 1 group marti chrisamiller kaarsinogen jfr aramata jmjimenez srp33 maralena cabbagesofdoom shikin cerca tmmurali GeneGo
	An experimentally derived confidence score for binary protein-protein interactions [My Copy] Nat Meth, Vol. 6, No. 1. (07 December 2008), pp. 91-97. by Pascal Braun, Murat Tasan, Matija Dreze, et al.Miriam Barrios-Rodiles, Irma Lemmens, Haiyuan Yu, Julie M. Sahalie, Ryan R. Murray, Luba Roncari, Anne-Sophie de Smet, Kavitha Venkatesan, Jean-Francois Rual, Jean Vandenhaute, Michael E. Cusick, Tony Pawson, David E. Hill, Jan Tavernier, Jeffrey L. Wrana, Frederick P. Roth, Marc Vidal posted to experiment protein-interaction-networks by lawraga on 2009-07-08 11:32:51 as along with 7 people aceol anf carlk ocs zwang guhjy sjcockell
	Cost-effective strategies for completing the interactome [My Copy] Nat Meth, Vol. 6, No. 1. (14 January 2009), pp. 55-61. by Ariel S. Schwartz, Jingkai Yu, Kyle R. Gardenour, Russell L. Finley Jr, Trey Ideker posted to experiment protein-interaction-networks by lawraga on 2009-07-08 11:31:21 as along with 4 people guhjy mhamada eetadic shikin
	A map of the interactome network of the metazoan C. elegans. [My Copy] Science (New York, N.Y.), Vol. 303, No. 5657. (23 January 2004), pp. 540-543. by S. Li, C. M. Armstrong, N. Bertin, et al.H. Ge, S. Milstein, M. Boxem, P. O. Vidalain, J. D. Han, A. Chesneau, T. Hao, D. S. Goldberg, N. Li, M. Martinez, J. F. Rual, P. Lamesch, L. Xu, M. Tewari, S. L. Wong, L. V. Zhang, G. F. Berriz, L. Jacotot, P. Vaglio, J. Reboul, T. Hirozane-Kishikawa, Q. Li, H. W. Gabel, A. Elewa, B. Baumgartner, D. J. Rose, H. Yu, S. Bosak, R. Sequerra, A. Fraser, S. E. Mango, W. M. Saxton, S. Strome, S. Van Den Heuvel, F. Piano, J. Vandenhaute, C. Sardet, M. Gerstein, L. Doucette-Stamm, K. C. Gunsalus, J. W. Harper, M. E. Cusick, F. P. Roth, D. E. Hill, M. Vidal posted to experiment protein-interaction-networks by lawraga on 2009-05-25 14:23:14 as along with 14 people and 2 groups mgomes Scis0000002 thegoose2 semin cerca tharris shivaram lfriedl nuke2005 lyongu sesejun Chue carlk ksiek C. elegans / WormBase kdl
	Lethality and centrality in protein networks [My Copy] Nature, Vol. 411, No. 6833. (03 May 2001), pp. 41-42. by H. Jeong, S. P. Mason, A. L. Barabasi, Z. N. Oltvai posted to protein-interaction-networks by lawraga on 2009-05-25 14:21:02 as along with 24 people and 2 groups pablocarb feshbach mgomes deanmalmgren jmenche muraken davidecellai diamantis dylanwalker jiny kuhn cmmorel nickluscombe gurkanbebek jeremymiller timflutre ruvido gcalda grahamc lpfernandes Evangelia iris_2001 cerca ethkim EBI-regulation GeschwindLab
	An assessment of the uses of homologous interactions [My Copy] Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 689-695. by Ramazan Saeed, Charlotte Deane posted to protein-interaction-networks by lawraga on 2009-05-04 12:14:32 as along with 11 people snow_dragon carlk winterschlaefer chad_davis grahamc cjeans laughcry mingzhi cdeane Pao-Yang samesense
	Online Predicted Human Interaction Database [My Copy] Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 2076-2082. by Kevin R. Brown, Igor Jurisica posted to databases protein-interaction-networks by lawraga on 2009-04-19 21:17:57 as along with 4 people guhjy frohike cerca diamantis
	An empirical framework for binary interactome mapping. [My Copy] Nature methods, Vol. 6, No. 1. (07 January 2009), pp. 83-90. by Kavitha Venkatesan, Jean-François Rual, Alexei Vazquez, et al.Ulrich Stelzl, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Martina Zenkner, Xiaofeng Xin, Kwang-Il Goh, Muhammed A. Yildirim, Nicolas Simonis, Kathrin Heinzmann, Fana Gebreab, Julie M. Sahalie, Sebiha Cevik, Christophe Simon, Anne-Sophie de Smet, Elizabeth Dann, Alex Smolyar, Arunachalam Vinayagam, Haiyuan Yu, David Szeto, Heather Borick, Amélie Dricot, Niels Klitgord, Ryan R. Murray, Chenwei Lin, Maciej Lalowski, Jan Timm, Kirstin Rau, Charles Boone, Pascal Braun, Michael E. Cusick, Frederick P. Roth, David E. Hill, Jan Tavernier, Erich E. Wanker, Albert-László Barabási, Marc Vidal posted to databases protein-interaction-networks by lawraga on 2009-04-19 17:03:06 as along with 4 people chica jfr lp2 guhjy
	Protein-protein interaction networks and biology--what's the connection? [My Copy] Nature biotechnology, Vol. 26, No. 1. (January 2008), pp. 69-72. by Luke Hakes, John W. Pinney, David L. Robertson, Simon C. Lovell posted to databases protein-interaction-networks by lawraga on 2009-04-19 17:02:13 as along with 19 people and 1 group ptrobajo colmryan flbarroso Yanno guhjy tmmurali jfr balicea dullhunk neils mikaelhuss cjeans nedwards biehl shikin mclarenv Yumyai paolomarcatili zdai GeneGo
	Gaining confidence in high-throughput protein interaction networks. [My Copy] Nature biotechnology, Vol. 22, No. 1. (January 2004), pp. 78-85. by J. S. Bader, A. Chaudhuri, J. M. Rothberg, J. Chant posted to databases protein-interaction-networks by lawraga on 2009-04-19 17:01:10 as along with 17 people and 1 group aceol carlk chica anf dakelley wenhui ocs dragonrez lfriedl gurkanbebek raiyar cjeans iris_2001 patrycjam patrycja_missiuro Evangelia ellakat kdl
	Analyzing yeast protein-protein interaction data obtained from different sources [My Copy] Nat Biotech, Vol. 20, No. 10. (October 2002), pp. 991-997. by Gary D. Bader, Christopher W. Hogue posted to databases protein-interaction-networks by lawraga on 2009-04-19 16:57:58 as along with 8 people and 1 group csanford dragonrez lfriedl balajis wnpx dgront iris_2001 karfunkel kdl
	Sticking together? Falling apart? Exploring the dynamics of the interactome. [My Copy] Trends in biochemical sciences (17 April 2008) by Marc R R. Wilkins, Sarah K K. Kummerfeld posted to protein-interaction-networks by lawraga on 2009-04-18 18:46:51 as along with 3 people agomez guhjy kintoki
	Protein interactions: two methods for assessment of the reliability of high throughput observations. [My Copy] Molecular & cellular proteomics : MCP, Vol. 1, No. 5. (May 2002), pp. 349-356. by Charlotte M. Deane, Łukasz Salwiński, Ioannis Xenarios, David Eisenberg posted to databases protein-interaction-networks by lawraga on 2009-04-18 18:26:35 as along with 16 people and 1 group chica anf jimineep lptolik zdai tmmurali lfriedl bluto henschel ruvido iris_2001 shikin cdeane Pao-Yang ras chasmand kdl
	Modular organization of cellular networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 100, No. 3. (4 February 2003), pp. 1128-1133. by Alexander W. Rives, Timothy Galitski posted to gene-networks protein-interaction-networks by lawraga on 2009-04-18 17:29:30 as along with 9 people ycho0610 diamantis jiny karfunkel Evangelia stefanoallesina ellakat carlk roys
	Protein complexes and functional modules in molecular networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 21. (14 October 2003), pp. 12123-12128. by Victor Spirin, Leonid A. Mirny posted to protein-interaction-networks by lawraga on 2009-04-18 17:28:13 as along with 15 people and 4 groups ycho0610 diamantis jiny camster kentsis ujh tmmurali dragonrez karfunkel joseph_x_zhou Evangelia grahamc biehl ellakat carlk dbk-lab biophysics HIV_DR bioNetwork_sysBio
	Functional and topological characterization of protein interaction networks. [My Copy] Proteomics, Vol. 4, No. 4. (April 2004), pp. 928-942. by Soon-Hyung H. Yook, Zoltán N. Oltvai, Albert-László L. Barabási posted to pin-clustering protein-interaction-networks by lawraga on 2009-04-18 17:13:45 as along with 8 people chica snuppepuppan textoris gabrielr alexg grahamc iris_2001 carlk
	The Function of Communities in Protein Interaction Networks [My Copy] (6 Apr 2009) by A. C. F. Lewis, N. S. Jones, M. A. Porter, C. M. Deane posted to pin-clustering protein-interaction-networks by lawraga on 2009-04-18 17:01:11 as along with 3 people Borelli ocs deanmalmgren
	Detecting functional modules in the yeast protein-protein interaction network [My Copy] Bioinformatics, Vol. 22, No. 18. (15 September 2006), pp. 2283-2290. by Jingchun Chen, Bo Yuan posted to protein-interaction-networks pin-clustering by lawraga on 2009-03-31 16:14:05 as along with 4 people tmmurali jfr maralena ellakat
	The use of edge-betweenness clustering to investigate biological function in protein interaction networks. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (1 March 2005), 39. by R. Dunn, F. Dudbridge, C. M. Sanderson posted to protein-interaction-networks pin-clustering by lawraga on 2009-03-31 16:13:06 as along with 6 people lptolik tmmurali shivaram grahamc maralena ellakat
	An in vivo map of the yeast protein interactome. [My Copy] Science (New York, N.Y.), Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470. by Kirill Tarassov, Vincent Messier, Christian R. Landry, et al.Stevo Radinovic, Mercedes M. Serna Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W. Michnick posted to experiment protein-interaction-networks by lawraga on 2009-03-25 20:00:27 as along with 8 people phoenixzxl cabbagesofdoom guhjy neils aubinhon brianb tmmurali grahamc
	Stratus Not Altocumulus: A New View of the Yeast Protein Interaction Network [My Copy] PLoS Biol, Vol. 4, No. 10. (19 September 2006), e317. by Nizar N. Batada, Teresa Reguly, Ashton Breitkreutz, et al.Lorrie Boucher, Bobby-Joe Breitkreutz, Laurence D. Hurst, Mike Tyers posted to protein-interaction-networks theory by lawraga on 2009-03-25 19:47:50 as along with 8 people mgomes aswin jpoyatos iris_2001 winterschlaefer Evangelia carlk cdeane
	Confirmation of Organized Modularity in the Yeast Interactome [My Copy] PLoS Biol, Vol. 5, No. 6. (12 June 2007), e153. by Nicolas Bertin, Nicolas Simonis, Denis Dupuy, et al.Michael E. Cusick, Jing-Dong J. Han, Hunter B. Fraser, Frederick P. Roth, Marc Vidal posted to protein-interaction-networks theory by lawraga on 2009-03-25 19:43:42 as along with 4 people mgomes operon kintoki winterschlaefer
	Still Stratus Not Altocumulus: Further Evidence against the Date/Party Hub Distinction [My Copy] PLoS Biology, Vol. 5, No. 6. (1 June 2007), e154. by Nizar N. Batada, Teresa Reguly, Ashton Breitkreutz, et al.Lorrie Boucher, Bobby-Joe Breitkreutz, Laurence D. Hurst, Mike Tyers posted to protein-interaction-networks theory by lawraga on 2009-03-25 19:41:18 as along with 4 people winterschlaefer carlk antonkratz cdeane
	Functional organization of the yeast proteome by systematic analysis of protein complexes [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 141-147. by Anne-Claude Gavin, Markus Bosche, Roland Krause, et al.Paola Grandi, Martina Marzioch, Andreas Bauer, Jorg Schultz, Jens M. Rick, Anne-Marie Michon, Cristina-Maria Cruciat, Marita Remor, Christian Hofert, Malgorzata Schelder, Miro Brajenovic, Heinz Ruffner, Alejandro Merino, Karin Klein, Manuela Hudak, David Dickson, Tatjana Rudi, Volker Gnau, Angela Bauch, Sonja Bastuck, Bettina Huhse, Christina Leutwein, Marie-Anne Heurtier, Richard R. Copley, Angela Edelmann, Erich Querfurth, Vladimir Rybin, Gerard Drewes, Manfred Raida, Tewis Bouwmeester, Peer Bork, Bertrand Seraphin, Bernhard Kuster, Gitte Neubauer, Giulio Superti-Furga posted to experiment protein-interaction-networks by lawraga on 2009-03-25 19:35:09 as along with 24 people and 2 groups aceol carlk chica semin cerca taenneken adiel baaden dragonrez shivaram helenc lfriedl chad_davis balajis opheliav wnpx becarmson raiyar grahamc nicoleq iris_2001 csanford frohike ethkim kdl steinmetzlab
	A comprehensive analysis of protein\|[ndash]\|protein interactions in Saccharomyces cerevisiae [My Copy] Nature, Vol. 403, No. 6770. (10 February 2000), pp. 623-627. by Peter Uetz, Loic Giot, Gerard Cagney, et al.Traci A. Mansfield, Richard S. Judson, James R. Knight, Daniel Lockshon, Vaibhav Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Qureshi-Emili, Ying Li, Brian Godwin, Diana Conover, Theodore Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M. Rothberg posted to experiment protein-interaction-networks by lawraga on 2009-03-25 19:20:45 as along with 20 people and 1 group aceol mtaschuk nzm mgomes semin dragonrez bicko shivaram lfriedl chad_davis j3xucite dyermd timflutre ruvido gcalda grahamc laughcry hplatero csanford carlk kdl
	A comprehensive two-hybrid analysis to explore the yeast protein interactome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 8. (10 April 2001), pp. 4569-4574. by T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori, Y. Sakaki posted to experiment protein-interaction-networks by lawraga on 2009-03-25 19:19:14 as along with 20 people and 2 groups aceol MarcJungbluth chica semin kristallreiner adiel dragonrez okarsligil lfriedl chad_davis balajis nuke2005 kengg ruvido gcalda lpfernandes shikin hplatero csanford carlk kdl Bioinformatics
	Genome-Wide Protein Interaction Screens Reveal Functional Networks Involving Sm-Like Proteins [My Copy] Yeast, Vol. 1, No. 2. (2000), pp. 95-110. by Micheline Fromont-Racine, Andrew E. Mayes, Adeline Brunet-Simon, et al.Jean-Christophe Rain, Alan Colley, Ian Dix, Laurence Decourty, Nicolas Joly, Florence Ricard, Jean D. Beggs, Pierre Legrain posted to experiment protein-interaction-networks by lawraga on 2009-03-25 19:17:24 as
	Comparative assessment of large-scale data sets of protein-protein interactions. [My Copy] Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403. by Christian von Mering, Roland Krause, Berend Snel, et al.Michael Cornell, Stephen G. Oliver, Stanley Fields, Peer Bork posted to protein-interaction-networks by lawraga on 2009-03-25 19:06:11 as along with 25 people and 6 groups aceol nzm semin camster barry dragonrez bicko lfriedl chad_davis alexg j3xucite bundschu yeastyboy ruvido raiyar grahamc iris_2001 cmor shu Evangelia shikin Pao-Yang carlk cerca ethkim dbk-lab structural_bioinformatics kdl Bioinformatics generif_paper GeneGo
	Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks [My Copy] Nature Genetics, Vol. 40, No. 7. (July 2008), pp. 854-861. by Jun Zhu, Bin Zhang, Erin N. Smith, et al.Becky Drees, Rachel B. Brem, Leonid Kruglyak, Roger E. Bumgarner, Eric E. Schadt posted to complex-systems gene-networks protein-interaction-networks by lawraga on 2009-01-14 17:57:07 as
	Evidence for dynamically organized modularity in the yeast protein\|[ndash]\|protein interaction network [My Copy] Nature, Vol. 430, No. 6995. (09 July 2004), pp. 88-93. by Jing-Dong J. Han, Nicolas Bertin, Tong Hao, et al.Debra S. Goldberg, Gabriel F. Berriz, Lan V. Zhang, Denis Dupuy, Albertha J. Walhout, Michael E. Cusick, Frederick P. Roth, Marc Vidal posted to protein-interaction-networks by lawraga on 2008-11-04 14:10:16 as along with 31 people and 2 groups aceol daveGerrard colmryan mgomes saket diamantis davidecellai dragonrez lfriedl balajis yoh j3xucite kintoki koller mikaelhuss ruvido gcalda grahamc iris_2001 lpfernandes winterschlaefer Evangelia cdeane shung phoenixzxl stefanoallesina ellakat frohike shikin ksiek carlk kdl GeneGo

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networks	39
protein-interaction-networks	32
theory	31
networks-analysis-engine	25
complex-systems	17
gene-networks	13
experiment	13
databases	11
graphs	9
machine-learning	8
pin-clustering	6
expression-data	5
predictive-models	5
disease	4
eigenvalues	2
language	2
eigenfunctions	1

lawraga's protein-interaction-networks [32 articles] Export

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