lewista's genomics [20 articles] Export

Recent papers added to lewista's library classified by the tag genomics. You can also see everyone's genomics.

	Whole-Genome Comparison of Mycobacterium tuberculosis Clinical and Laboratory Strains [My Copy] J. Bacteriol., Vol. 184, No. 19. (1 October 2002), pp. 5479-5490. by R. D. Fleischmann, D. Alland, J. A. Eisen, et al.L. Carpenter, O. White, J. Peterson, R. Deboy, R. Dodson, M. Gwinn, D. Haft, E. Hickey, J. F. Kolonay, W. C. Nelson, L. A. Umayam, M. Ermolaeva, S. L. Salzberg, A. Delcher, T. Utterback, J. Weidman, H. Khouri, J. Gill, A. Mikula, W. Bishai, W. R. Jacobs, J. C. Venter, C. M. Fraser posted to genomics tuberculosis by lewista on 2009-03-05 14:55:40 as along with 2 people druvus cdallett
	Modeling Bacterial Evolution with Comparative-Genome-Based Marker Systems: Application to Mycobacterium tuberculosis Evolution and Pathogenesis [My Copy] J. Bacteriol., Vol. 185, No. 11. (1 June 2003), pp. 3392-3399. by David Alland, Thomas S. Whittam, Megan B. Murray, et al.M. Donald Cave, Manzour H. Hazbon, Kim Dix, Mark Kokoris, Andreas Duesterhoeft, Jonathan A. Eisen, Claire M. Fraser, Robert D. Fleischmann posted to genomics tuberculosis by lewista on 2009-03-05 14:39:49 as along with 1 person and 1 group katholt iSEEM
	Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates. [My Copy] Journal of clinical microbiology, Vol. 45, No. 11. (November 2007), pp. 3795-3801. by S. Octavia, R. Lan posted to genomics salmonella snp by lewista on 2008-12-31 16:37:47 as
	Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set [My Copy] J. Bacteriol., Vol. 188, No. 2. (15 January 2006), pp. 759-772. by Ingrid Filliol, Alifiya S. Motiwala, Magali Cavatore, et al.Weihong Qi, Manzour H. Hazbon, Miriam Bobadilla Del Valle, Janet Fyfe, Lourdes Garcia-Garcia, Nalin Rastogi, Christophe Sola, Thierry Zozio, Marta I. Guerrero, Clara I. Leon, Jonathan Crabtree, Sam Angiuoli, Kathleen D. Eisenach, Riza Durmaz, Moses L. Joloba, Adrian Rendon, Jose Sifuentes-Osornio, Alfredo de Leon, M. Donald Cave, Robert Fleischmann, Thomas S. Whittam, David Alland posted to genomics tuberculosis by lewista on 2008-12-18 12:34:52 as along with 4 people and 1 group katholt mycase sandfire madhadron Asian Pharmacogenetics Library
	Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4868-4873. by Shannon D. Manning, Alifiya S. Motiwala, A. Cody Springman, et al.Weihong Qi, David W. Lacher, Lindsey M. Ouellette, Janice M. Mladonicky, Patricia Somsel, James T. Rudrik, Stephen E. Dietrich, Wei Zhang, Bala Swaminathan, David Alland, Thomas S. Whittam posted to ecoli genomics by lewista on 2008-12-18 12:28:21 as along with 2 people katholt lag12345
	Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain. [My Copy] Journal of clinical microbiology, Vol. 45, No. 1. (1 January 2007), pp. 47-53. by Matthew N. Van Ert, W. Ryan Easterday, Tatum S. Simonson, et al.Jana M. U'Ren, Talima Pearson, Leo J. Kenefic, Joseph D. Busch, Lynn Y. Huynh, Megan Dukerich, Carla B. Trim, Jodi Beaudry, Amy Welty-Bernard, Timothy Read, Claire M. Fraser, Jacques Ravel, Paul Keim posted to anthrax genomics by lewista on 2008-12-18 12:23:33 as along with 1 person druvus
	Global Genetic Population Structure of Bacillus anthracis [My Copy] PLoS ONE, Vol. 2, No. 5. (2007), e461. by Matthew N. Van Ert, W. Ryan Easterday, Lynn Y. Huynh, et al.Richard T. Okinaka, Martin E. Hugh-Jones, Jacques Ravel, Shaylan R. Zanecki, Talima Pearson, Tatum S. Simonson, Jana M. U'Ren, Sergey M. Kachur, Rebecca R. Leadem-Dougherty, Shane D. Rhoton, Guenevier Zinser, Jason Farlow, Pamala R. Coker, Kimothy L. Smith, Bingxiang Wang, Leo J. Kenefic, Claire M. Fraser-Liggett, David M. Wagner, Paul Keim posted to anthrax genomics by lewista on 2008-12-18 12:21:44 as along with 2 people and 1 group azazello druvus microbiology_nijmegen
	Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 37. (14 September 2004), pp. 13536-13541. by T. Pearson, J. D. Busch, J. Ravel, et al.T. D. Read, S. D. Rhoton, J. M. U'Ren, T. S. Simonson, S. M. Kachur, R. R. Leadem, M. L. Cardon, M. N. Van Ert, L. Y. Huynh, C. M. Fraser, P. Keim posted to anthrax genomics by lewista on 2008-12-18 12:19:34 as
	Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue. [My Copy] Emerging infectious diseases, Vol. 14, No. 4. (April 2008), pp. 653-656. by Richard T. Okinaka, Melinda Henrie, Karen K. Hill, et al.Kristin S. Lowery, Matthew Van Ert, Talima Pearson, James Schupp, Leo Kenefic, Jodi Beaudry, Steven A. Hofstadler, Paul J. Jackson, Paul Keim posted to anthrax genomics by lewista on 2008-12-18 12:16:43 as along with 1 person druvus
	Dynamics of Genome Rearrangement in Bacterial Populations [My Copy] PLoS Genet, Vol. 4, No. 7. (18 July 2008), e1000128. by Aaron E. Darling, István Miklós, Mark A. Ragan posted to genomics yersinia by lewista on 2008-12-18 12:11:42 as along with 8 people nyyu AaronDarling treangen neils druvus Ema djkt jjray
	Genome sequence of Staphylococcus aureus strain Newman and comparative analysis of staphylococcal genomes: polymorphism and evolution of two major pathogenicity islands. [My Copy] J Bacteriol, Vol. 190, No. 1. (January 2008), pp. 300-310. by T. Baba, T. Bae, O. Schneewind, F. Takeuchi, K. Hiramatsu posted to genomics mssa by lewista on 2008-12-18 10:47:13 as along with 1 person Xavier
	Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain [My Copy] J. Bacteriol., Vol. 187, No. 7. (1 April 2005), pp. 2426-2438. by Steven R. Gill, Derrick E. Fouts, Gordon L. Archer, et al.Emmanuel F. Mongodin, Robert T. Deboy, Jacques Ravel, Ian T. Paulsen, James F. Kolonay, Lauren Brinkac, Mauren Beanan, Robert J. Dodson, Sean C. Daugherty, Ramana Madupu, Samuel V. Angiuoli, A. Scott Durkin, Daniel H. Haft, Jessica Vamathevan, Hoda Khouri, Terry Utterback, Chris Lee, George Dimitrov, Lingxia Jiang, Haiying Qin, Jan Weidman, Kevin Tran, Kathy Kang, Ioana R. Hance, Karen E. Nelson, Claire M. Fraser posted to cns genomics mrsa mssa by lewista on 2008-12-18 10:44:29 as along with 2 people katholt Xavier
	Tracking the in vivo evolution of multidrug resistance in Staphylococcus aureus by whole-genome sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 22. (29 May 2007), pp. 9451-9456. by Michael M. Mwangi, Shang W. Wu, Yanjiao Zhou, et al.Krzysztof Sieradzki, Herminia de Lencastre, Paul Richardson, David Bruce, Edward Rubin, Eugene Myers, Eric D. Siggia, Alexander Tomasz posted to genomics mssa by lewista on 2008-12-15 16:14:09 as along with 4 people druvus gwenknight aprasad Xavier
	Horizontal gene transfers link a human MRSA pathogen to contagious bovine mastitis bacteria. [My Copy] PLoS ONE, Vol. 3, No. 8. (2008) by T. Brody, A. S. Yavatkar, Y. Lin, et al.J. Ross, A. Kuzin, M. Kundu, Y. Fann, W. F. Odenwald posted to genomics mssa by lewista on 2008-12-15 11:53:05 as
	Multiple Genome Comparison within a Bacterial Species Reveals a Unit of Evolution Spanning Two Adjacent Genes in a Tandem Paralog Cluster [My Copy] Mol Biol Evol, Vol. 25, No. 11. (1 November 2008), pp. 2457-2473. by Takeshi Tsuru, Ichizo Kobayashi posted to genomics mssa by lewista on 2008-12-15 11:50:45 as along with 1 person djkt
	Comparative genome sequence analysis of multidrug-resistant Acinetobacter baumannii. [My Copy] Journal of bacteriology, Vol. 190, No. 24. (December 2008), pp. 8053-8064. by M. D. Adams, K. Goglin, N. Molyneaux, et al.K. M. Hujer, H. Lavender, J. J. Jamison, I. J. MacDonald, K. M. Martin, T. Russo, A. A. Campagnari, A. M. Hujer, R. A. Bonomo, S. R. Gill posted to acinetobacter genomics by lewista on 2008-12-04 16:23:19 as
	Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa. [My Copy] Journal of bacteriology, Vol. 185, No. 4. (February 2003), pp. 1316-1325. by D. H. Spencer, A. Kas, E. E. Smith, et al.C. K. Raymond, E. H. Sims, M. Hastings, J. L. Burns, R. Kaul, M. V. Olson posted to genomics by lewista on 2008-11-21 17:09:57 as
	High-Precision, Whole-Genome Sequencing of Laboratory Strains Facilitates Genetic Studies [My Copy] PLoS Genet, Vol. 4, No. 8. (2008), e1000139. by Anjana Srivatsan, Yi Han, Jianlan Peng, et al.Ashley K. Tehranchi, Richard Gibbs, Jue D. Wang, Rui Chen posted to genomics by lewista on 2008-11-21 16:25:57 as along with 7 people azazello usagi-kirin druvus abizar ojabado reyez caseybrown
	High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi [My Copy] Nature Genetics, Vol. 40, No. 8. (27 July 2008), pp. 987-993. by Kathryn E. Holt, Julian Parkhill, Camila J. Mazzoni, et al.Philippe Roumagnac, François-Xavier Weill, Ian Goodhead, Richard Rance, Stephen Baker, Duncan J. Maskell, John Wain, Christiane Dolecek, Mark Achtman, Gordon Dougan posted to genomics by lewista on 2008-11-21 16:24:20 as along with 10 people azazello felsani usagi-kirin treangen abizar druvus caseybrown pengchy Stew aconesa
	DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome [My Copy] Nature, Vol. 456, No. 7218. (06 November 2008), pp. 66-72. by Timothy J. Ley, Elaine R. Mardis, Li Ding, et al.Bob Fulton, Michael D. McLellan, Ken Chen, David Dooling, Brian H. Dunford-Shore, Sean McGrath, Matthew Hickenbotham, Lisa Cook, Rachel Abbott, David E. Larson, Dan C. Koboldt, Craig Pohl, Scott Smith, Amy Hawkins, Scott Abbott, Devin Locke, LaDeana W. Hillier, Tracie Miner, Lucinda Fulton, Vincent Magrini, Todd Wylie, Jarret Glasscock, Joshua Conyers, Nathan Sander, Xiaoqi Shi, John R. Osborne, Patrick Minx, David Gordon, Asif Chinwalla, Yu Zhao, Rhonda E. Ries, Jacqueline E. Payton, Peter Westervelt, Michael H. Tomasson, Mark Watson, Jack Baty, Jennifer Ivanovich, Sharon Heath, William D. Shannon, Rakesh Nagarajan, Matthew J. Walter, Daniel C. Link, Timothy A. Graubert, John F. DiPersio, Richard K. Wilson posted to genomics by lewista on 2008-11-17 13:07:33 as along with 16 people n00c tommcdonagh jonilaserson jessopher frohike jfr vmsr yupu kentsis suteedee reyez caseybrown pkonings rodney davfre djkt

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mrsa	51
glycopeptide	28
mssa	21
genomics	20
environment	17
epidemiology	12
heteroresistance	12
acinetobacter	9
pharmacokinetics	6
diagnostics	5
anthrax	4
crbsi	4
hcai	4
pji	4
prevention	4
tuberculosis	4
endocarditis	3
evolution	3
military	3
pcp	3
rifampicin	3
anaerobes	2
osteomyelitis	2
transplantation	2
aminoglycoside	1
beta-lactamase	1
cap	1
cdiff	1
cns	1
ecoli	1
fungal	1
influenza	1
lyme	1
norovirus	1
pneumonia	1
prophylaxis	1
quality	1
quorum	1
salmonella	1
sepsis	1
snp	1
stewardship	1
tdm	1
typing	1
yersinia	1

lewista's genomics [20 articles] Export

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