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	A Novel CDK9-Associated C-Type Cyclin Interacts Directly with HIV-1 Tat and Mediates Its High-Affinity, Loop-Specific Binding to TAR RNA [My Copy] Cell, Vol. 92, No. 4. (20 February 1998), pp. 451-462. by Ping Wei, Mitchell E. Garber, Shi-Min Fang, Wolfgang H. Fischer, Katherine A. Jones posted to hiv-1 tar-tat tat by lillekatt on 2007-11-25 12:12:14 as
	TAK, an HIV Tat-associated kinase, is a member of the cyclin-dependent family of protein kinases and is induced by activation of peripheral blood lymphocytes and differentiation of promonocytic cell lines [My Copy] Proceedings of the National Academy of Sciences, Vol. 94, No. 23. (11 November 1997), pp. 12331-12336. by Xinzhen Yang, Moses O. Gold, Derek N. Tang, et al.Dorothy E. Lewis, Estuardo Aguilar-Cordova, Andrew P. Rice, Christine H. Herrmann posted to hiv-1_hiv-2 tak tat by lillekatt on 2007-11-25 12:08:47 as
	P-TEFb kinase is required for HIV Tat transcriptional activation in vivo and in vitro [My Copy] Genes Dev., Vol. 11, No. 20. (15 October 1997), pp. 2633-2644. by Helena S. Mancebo, Gary Lee, John Flygare, et al.Joanne Tomassini, Percy Luu, Yuerong Zhu, Junmin Peng, Carol Blau, Daria Hazuda, David Price, Osvaldo Flores posted to hiv-1 tat by lillekatt on 2007-11-25 11:49:57 as
	Transcription elongation factor P-TEFb is required for HIV-1 Tat transactivation in vitro [My Copy] Genes Dev., Vol. 11, No. 20. (15 October 1997), pp. 2622-2632. by Yuerong Zhu, Tsafrira Pe'ery, Junmin Peng, et al.Yegnanarayana Ramanathan, Nick Marshall, Tricia Marshall, Brad Amendt, Michael B. Mathews, David H. Price posted to hiv-1_hiv-2 tat by lillekatt on 2007-11-25 11:41:22 as
	HIV-1 tat trans-activation requires the loop sequence within tar [My Copy] Nature, Vol. 334, No. 6178. (14 July 1988), pp. 165-167. by Sandy Feng, Eric C. Holland posted to hiv-1 tar tar-tat tat by lillekatt on 2007-11-25 11:38:02 as
	Regulation of mRNA accumulation by a human immunodeficiency virus trans-activator protein. [My Copy] Cell, Vol. 48, No. 4. (27 February 1987), pp. 691-701. by M. A. Muesing, D. H. Smith, D. J. Capon posted to hiv-1 tat by lillekatt on 2007-11-25 11:01:32 as
	The binding affinity of double-stranded RNA motifs to HIV-1 Tat protein affects transactivation and the neutralizing capacity of anti-Tat antibodies elicited after intranasal immunization. [My Copy] Eur J Immunol, Vol. 35, No. 5. (May 2005), pp. 1521-1529. by C. D. Partidos, J. Hoebeke, E. Moreau, et al.O. Chaloin, M. Tunis, G. Belliard, J. P. Briand, C. Desgranges, S. Muller posted to tat by lillekatt on 2005-10-24 13:21:04 as
	Comparative analysis of HIV-1 Tat variants. [My Copy] Proteins, Vol. 58, No. 3. (15 February 2005), pp. 638-643. by S. Pantano, P. Carloni posted to md tat by lillekatt on 2005-05-24 16:00:56 as
	Amino acid modification in the HIV-1 Tat basic domain: insights from molecular dynamics and in vivo functional studies. [My Copy] J Mol Biol, Vol. 318, No. 5. (17 May 2002), pp. 1331-1339. by S. Pantano, M. Tyagi, M. Giacca, P. Carloni posted to md tar-tat tat by lillekatt on 2005-05-18 08:14:02 as
	Structure of the equine infectious anemia virus Tat protein. [My Copy] Science, Vol. 264, No. 5165. (10 June 1994), pp. 1584-1587. by D. Willbold, R. Rosin-Arbesfeld, H. Sticht, R. Frank, P. Rösch posted to equine tat by lillekatt on 2005-05-13 09:54:14 as

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md	41
thermodynamics	27
tar-tat	23
rna	18
counterions	14
amber	13
rna-ligands	12
tar-neomycin	11
sampling	11
tat	10
itc	9
ions	8
tar-arginine	8
hiv-1	8
mm-pbsa	7
replica_exchange	7
force_field	7
mymd	6
tar	6
tar-argininamide	6
pme	5
tar-ligands	5
protein-ligand	5
protein-folding	5
ms	4
nmr	4
tar-acetylpromazine	4
rna-antibiotics	3
affinities	3
dna-protein	3
binding_free_energies	3
hiv-1_hiv-2	3
continuum-solvent	3
protein-protein	2
solvent_accessible_surface	2
charges	2
drug_design	2
hiv-2	2
binding	2
dna	2
entropy	2
interactions	2
computer_based	2
resp	2
nucleic_acids	2
trna	1
atomic_charges	1
1arj	1
electrostatics	1
tak	1
parse_parameters	1
equine	1
virtuell_screening	1
alanine_scanning	1
rnafree	1
poisson-boltzmann	1
tat-cyclin1	1
1lvj	1
biv	1
parallel_tempering	1
tata_tbp	1
energy	1
flying_icecube	1
docking	1
modelling	1
gaff	1
artifacts	1
pdb	1
temperature	1
hammerhead	1
fluorescence	1
noncovalent_interactions	1
monte_carlo	1
rna-dna	1
structure-prediction	1
atomic_radii	1
drugscore	1
intermolecular-interactions	1
arginine-fork	1
epr	1

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