Evaluation of ontology development tools for bioinformatics. Export

@article{citeulike:850761, abstract = {Ontologies are being used nowadays in many areas, including bioinformatics. To assist users in developing and maintaining ontologies a number of tools have been developed. In this paper we compare four such tools, Prot\'{e}g\'{e}-2000, Chimaera, DAG-Edit and OilEd. As test ontologies we have used ontologies from the Gene Ontology Consortium. No system is preferred in all situations, but each system has its own strengths and weaknesses.}, address = {Department of Computer and Information Science, Link\"{o}pings universitet, 581 83 Link\"{o}ping, Sweden. patla@ida.liu.se}, author = {Lambrix, P. and Habbouche, M. and P\'{e}rez, M.}, citeulike-article-id = {850761}, citeulike-linkout-0 = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/19/12/1564}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/12912838}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=12912838}, comment = {overview of differnt software approaches to ontology construction.}, day = {12}, issn = {1367-4803}, journal = {Bioinformatics}, keywords = {bioinformatics, compsci, genetic, intro, ontology}, month = {August}, number = {12}, pages = {1564--1571}, posted-at = {2006-09-20 08:40:39}, priority = {2}, title = {Evaluation of ontology development tools for bioinformatics.}, url = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/19/12/1564}, volume = {19}, year = {2003} }

TY - JOUR ID - citeulike:850761 L3 - citeulike-article-id:850761 N2 - Ontologies are being used nowadays in many areas, including bioinformatics. To assist users in developing and maintaining ontologies a number of tools have been developed. In this paper we compare four such tools, Protégé-2000, Chimaera, DAG-Edit and OilEd. As test ontologies we have used ontologies from the Gene Ontology Consortium. No system is preferred in all situations, but each system has its own strengths and weaknesses. IS - 12 JF - Bioinformatics SN - 1367-4803 AD - Department of Computer and Information Science, Linköpings universitet, 581 83 Linköping, Sweden. patla@ida.liu.se EP - 1571 TI - Evaluation of ontology development tools for bioinformatics. VL - 19 SP - 1564 KW - bioinformatics KW - compsci KW - genetic KW - intro KW - ontology N1 - overview of differnt software approaches to ontology construction. AU - Lambrix, P AU - Habbouche, M AU - Pérez, M PY - 2003/08/12/ UR - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/19/12/1564 ER -