lna's library 445 articles Export

	Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra [My Copy] Magnetic Resonance in Chemistry, Vol. 44, No. S1. (2006), pp. S83-S88. by Anna Scott, Blanca López-Méndez, Peter Güntert posted to garant assignment by lna on 2009-10-20 12:52:57 as
	Distribution of mutual information from complete and incomplete data [My Copy] Computational Statistics & Data Analysis, Vol. 48, No. 3. (01 March 2005), pp. 633-657. by M. Hutter, M. Zaffalon posted to scoring by lna on 2009-08-12 15:53:33 as
	Automated Resonance Assignment of Proteins Using Heteronuclear 3D NMR. 2. Side Chain and Sequence-Specific Assignment [My Copy] Journal of Chemical Information and Computer Sciences, Vol. 37, No. 3. (1 May 1997), pp. 467-477. by Kuo-Bin Li, B. C. Sanctuary posted to assignment by lna on 2009-08-06 16:31:17 as along with 1 person kumar_physics
	PACES: Protein sequential assignment by computer-assisted exhaustive search [My Copy] Journal of Biomolecular NMR, Vol. 26, No. 2. (1 June 2003), pp. 93-111. by Brian E. Coggins, Pei Zhou posted to assignment by lna on 2009-08-06 16:28:50 as
	IBIS – A tool for automated sequential assignment of protein spectra from triple resonance experiments [My Copy] Journal of Biomolecular NMR, Vol. 26, No. 4. (1 August 2003), pp. 335-344. by Sven G. Hyberts, Gerhard Wagner posted to assignment by lna on 2009-08-06 16:26:26 as
	Automated protein structure calculation from NMR data [My Copy] Journal of Biomolecular NMR, Vol. 43, No. 3. (1 March 2009), pp. 131-143. by Mike Williamson, C. Craven posted to assignment review by lna on 2009-08-06 15:29:08 as along with 1 person babakap
	Automated analysis of protein NMR assignments using methods from artificial intelligence [My Copy] Journal of Molecular Biology, Vol. 269, No. 4. (20 June 1997), pp. 592-610. by D. Zimmerman posted to assignment by lna on 2009-07-31 11:52:43 as along with 2 people kumar_physics apaydin
	Reconsidering complete search algorithms for protein backbone NMR assignment [My Copy] Bioinformatics, Vol. 21, No. suppl_2. (1 September 2005), pp. ii230-236. by Olga Vitek, Chris Bailey-Kellogg, Bruce Craig, Paul Kuliniewicz, Jan Vitek posted to assignment by lna on 2009-07-31 11:45:39 as along with 1 person and 1 group babakap Dartmouth Computer Science
	Automated structure determination from NMR spectra [My Copy] European Biophysics Journal, Vol. 38, No. 2. (1 February 2009), pp. 129-143. by Peter Güntert posted to assignment by lna on 2009-07-30 15:09:16 as along with 3 people dgront bmduggan apaydin
	Assignment validation software suite for the evaluation and presentation of protein resonance assignment data [My Copy] Journal of Biomolecular NMR, Vol. 28, No. 4. (1 April 2004), pp. 341-355. by Hunter N. B. Moseley, Gurmukh Sahota, Gaetano T. Montelione posted to assignment by lna on 2009-07-30 15:02:00 as
	Automated assignment of NMR chemical shifts using peak-particle dynamics simulation with the DYNASSIGN algorithm [My Copy] Journal of Biomolecular NMR, Vol. 43, No. 2. (1 February 2009), pp. 97-109. by Roland Schmucki, Shigeyuki Yokoyama, Peter Güntert posted to assignment by lna on 2009-07-29 15:06:19 as along with 1 person babakap
	Sequence-specific NMR assignment of proteins by global fragment mapping with the program Mapper [My Copy] Journal of Biomolecular NMR, Vol. 18, No. 2. (1 October 2000), pp. 129-137. by Peter Güntert, Michael Salzmann, Daniel Braun, Kurt Wüthrich posted to assignment by lna on 2009-07-21 15:50:32 as along with 1 person apaydin
	Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function [My Copy] Journal of Computational Chemistry, Vol. 19, No. 14. (6 January 1998), pp. 1639-1662. by Garrett M. Morris, David S. Goodsell, Robert S. Halliday, et al.Ruth Huey, William E. Hart, Richard K. Belew, Arthur J. Olson posted to docking by lna on 2009-04-16 09:27:13 as along with 22 people and 2 groups nickolay npt11tpn jamalex joule Lombardo_7 karinaecomp oteri A_Coletta_Thesis arlam dgruiz nachtalp P2324548 yongzhao peprovy tovrstra papatonyhill schlauchi carlescorbi middledomain LamBras andreramme UVA_mag_res Chang group TSRI_MGL
	Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4 [My Copy] Journal of Computer-Aided Molecular Design, Vol. 10, No. 4. (1 August 1996), pp. 293-304. by Garrett M. Morris, David S. Goodsell, Ruth Huey, Arthur J. Olson posted to docking by lna on 2009-04-16 09:26:08 as
	How to support inheritance and run-time polymorphism in Fortran 90 [My Copy] Computer Physics Communications, Vol. 115, No. 1. (01 December 1998), pp. 9-17. by V. Decyk posted to fortran by lna on 2009-01-12 13:17:30 as
	Automated NMR protein structure calculation [My Copy] Progress in Nuclear Magnetic Resonance Spectroscopy, Vol. 43, No. 3-4. (19 December 2003), pp. 105-125. by Peter Güntert posted to no-tag by lna on 2008-09-11 10:27:00 as along with 2 people kumar_physics sameguy
	Optimal isotope labelling for NMR protein structure determinations [My Copy] Nature, Vol. 440, No. 7080., pp. 52-57. by Masatsune Kainosho, Takuya Torizawa, Yuki Iwashita, Tsutomu Terauchi, Akira M. Ono, Peter Güntert posted to assignment by lna on 2008-09-03 16:02:08 as along with 2 people sameguy viktor21614
	Object-oriented design patterns in Fortran 90/95: mazev1, mazev2 and mazev3 [My Copy] Computer Physics Communications, Vol. 178, No. 8. (15 April 2008), pp. 611-620. by Viktor K. Decyk, Henry J. Gardner posted to fortran by lna on 2008-07-16 10:16:19 as along with 1 person peterheng
	Diagnostic chemical shift markers for loop conformation and substrate and cofactor binding in dihydrofolate reductase complexes. [My Copy] Protein Sci, Vol. 12, No. 10. (October 2003), pp. 2230-2238. by M. J. Osborne, R. P. Venkitakrishnan, H. J. Dyson, P. E. Wright posted to dhfr by lna on 2008-06-27 15:33:28 as along with 1 person dgruiz
	Cell-free translation reconstituted with purified components. [My Copy] Nature biotechnology, Vol. 19, No. 8. (August 2001), pp. 751-755. by Y. Shimizu, A. Inoue, Y. Tomari, et al.T. Suzuki, T. Yokogawa, K. Nishikawa, T. Ueda posted to dhfr by lna on 2008-06-27 15:23:30 as
	High-throughput analysis of protein NMR spectra [My Copy] Progress in Nuclear Magnetic Resonance Spectroscopy, Vol. 46, No. 2-3. (30 May 2005), pp. 109-129. by Daniel Malmodin, Martin Billeter posted to assignment by lna on 2008-05-09 14:31:17 as along with 1 person yxue
	MONTE: An automated Monte Carlo based approach to nuclear magnetic resonance assignment of proteins [My Copy] Journal of Biomolecular NMR, Vol. 25, No. 1. (January 2003), pp. 1-9. by Kevin T. Hitchens, Jonathan A. Lukin, Yiping Zhan, Scott A. Mccallum, Gordon S. Rule posted to assignment by lna on 2008-05-09 12:34:40 as along with 1 person apaydin
	Automated sequence-specific NMR assignment of homologous proteins using the program GARANT [My Copy] Journal of Biomolecular NMR, Vol. 7, No. 3. (1 May 1996), pp. 207-213. by Christian Bartels, Martin Billeter, Peter Güntert, Kurt Wüthrich posted to assignment garant by lna on 2008-05-08 09:23:03 as along with 1 person apaydin
	Distribution of chemical shifts in 1H nuclear magnetic resonance spectra of proteins [My Copy] Journal of Magnetic Resonance (1969), Vol. 76, No. 1. (January 1988), pp. 87-99. by Karl-Heinz Groß, Hans R. Kalbitzer posted to assignment garant by lna on 2008-05-08 09:08:02 as
	A high quality nuclear magnetic resonance solution structure of peptide deformylase from Escherichia coli: Application of an automated assignment strategy using GARANT [My Copy] Journal of Biomolecular NMR, Vol. 13, No. 4. (1 April 1999), pp. 311-324. by John F. O'Connell, Kellyann D. Pryor, Stephan K. Grant, Barbara Leiting posted to assignment garant by lna on 2008-05-07 08:58:28 as
	Protein NMR Structure Determination with Automated NOE Assignment Using the New Software CANDID and the Torsion Angle Dynamics Algorithm DYANA [My Copy] Journal of Molecular Biology, Vol. 319, No. 1. (24 May 2002), pp. 209-227. by Torsten Herrmann, Peter Güntert, Kurt Wüthrich posted to assignment cyana by lna on 2008-04-30 10:25:09 as along with 3 people apaydin kumar_physics stharward
	Automated structure determination of proteins by NMR spectroscopy [My Copy] Progress in Nuclear Magnetic Resonance Spectroscopy, Vol. 44, No. 1-2. (16 April 2004), pp. 33-96. by Wolfram Gronwald, Hans R. Kalbitzer posted to assignment by lna on 2008-04-30 08:44:18 as along with 1 person kumar_physics
	Automated combined assignment of NOESY spectra and three-dimensional protein structure determination. [My Copy] Journal of biomolecular NMR, Vol. 10, No. 4. (December 1997), pp. 351-362. by C. Mumenthaler, P. Güntert, W. Braun, K. Wüthrich posted to assignment by lna on 2008-04-22 11:07:45 as
	Fully automated sequence-specific resonance assignments of hetero- nuclear protein spectra. [My Copy] Journal of biomolecular NMR, Vol. 27, No. 1. (September 2003), pp. 69-79. by D. Malmodin, C. H. Papavoine, M. Billeter posted to assignment by lna on 2008-04-21 11:12:00 as
	Influence of the completeness of chemical shift assignments on NMR structures obtained with automated NOE assignment. [My Copy] Journal of structural and functional genomics, Vol. 4, No. 2-3. (2003), pp. 179-189. by J. Jee, P. Güntert posted to assignment by lna on 2008-04-21 09:38:53 as
	Automated analysis of protein NMR assignments and structures. [My Copy] Chemical reviews, Vol. 104, No. 8. (August 2004), pp. 3541-3556. by M. C. Baran, Y. J. Huang, H. N. Moseley, G. T. Montelione posted to assignment by lna on 2008-04-17 14:05:30 as along with 2 people kumar_physics apaydin
	Automated analysis of NMR assignments and structures for proteins. [My Copy] Current opinion in structural biology, Vol. 9, No. 5. (October 1999), pp. 635-642. by H. N. Moseley, G. T. Montelione posted to assignment by lna on 2008-04-17 13:51:58 as
	Torsion angle dynamics for NMR structure calculation with the new program D? [My Copy] Journal of Molecular Biology, Vol. 273, No. 1. (17 October 1997), pp. 283-298. by P. Güntert posted to cyana by lna on 2008-04-16 15:47:30 as along with 5 people dsmueller ras stharward babakap BragilMassoud
	Automated protein structure determination from NMR spectra. [My Copy] Journal of the American Chemical Society, Vol. 128, No. 40. (11 October 2006), pp. 13112-13122. by B. López-Méndez, P. Güntert posted to cyana by lna on 2008-04-16 15:12:38 as along with 2 people rph sameguy
	Structural identification of the pathway of long-range communication in an allosteric enzyme [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 6. (12 February 2008), pp. 1832-1837. by Prafull S. Gandhi, Zhiwei Chen, F. Scott Mathews, Enrico Di Cera posted to allostery pathways by lna on 2008-02-13 12:05:17 as along with 3 people and 1 group boris_aguilar cactus sobolevnrm baker-group
	Atom Depth as a Descriptor of the Protein Interior [My Copy] Biophys. J., Vol. 84, No. 4. (1 April 2003), pp. 2553-2561. by Alessandro Pintar, Oliviero Carugo, Sandor Pongor posted to h-bonds by lna on 2008-02-06 12:18:11 as along with 1 person kaarsinogen
	Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features [My Copy] Biopolymers, Vol. 22, No. 12. (December 1983), pp. 2577-2637. by Wolfgang Kabsch, Christian Sander posted to h-bonds by lna on 2008-02-06 12:15:04 as along with 32 people barmak7282 Vadikus j3xucite scampos TLVincent maria_hauser pablocarb rpetrenko carlosjavierna mijam wqia007 dsmueller niallhaslam saunders jwm sebk Diego_Prada pjcite kaarsinogen chad_davis wouterboomsma penka ffranca dgront choonpeng rabio gisle medic0747 martainn chgjb mschofie marti
	Atom depth in protein structure and function. [My Copy] Trends Biochem Sci, Vol. 28, No. 11. (November 2003), pp. 593-597. by A. Pintar, O. Carugo, S. Pongor posted to h-bonds by lna on 2007-12-19 13:19:53 as along with 2 people and 2 groups hryk barry structural_bioinformatics Bioinformatics
	Patterns and networks of hydrogen-bonds in the hydration structure of human lysozyme [My Copy] Chemical Physics Letters, Vol. 410, No. 1-3. (10 July 2005), pp. 31-35. by Tsuyoshi Yokomizo, Junich Higo, Masayoshi Nakasako posted to h-bonds lysozyme md by lna on 2007-12-18 14:15:30 as
	Structural determinants of protein dynamics: analysis of 15N NMR relaxation measurements for main-chain and side-chain nuclei of hen egg white lysozyme. [My Copy] Biochemistry, Vol. 34, No. 12. (28 March 1995), pp. 4041-4055. by M. Buck, J. Boyd, C. Redfield, et al.D. A. MacKenzie, D. J. Jeenes, D. B. Archer, C. M. Dobson posted to dynamics lysozyme by lna on 2007-08-27 10:39:36 as along with 1 person allmensch
	Structure-based analysis of protein dynamics: comparison of theoretical results for hen lysozyme with X-ray diffraction and NMR relaxation data. [My Copy] Proteins, Vol. 37, No. 4. (1 December 1999), pp. 654-667. by T. Haliloglu, I. Bahar posted to dynamics gnm lysozyme by lna on 2007-08-27 10:36:41 as along with 2 people apaydin allmensch
	Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 18. (4 May 2004), pp. 6946-6951. by Alexandre V. Morozov, Tanja Kortemme, Kiril Tsemekhman, David Baker posted to h-bonds by lna on 2007-08-15 13:43:42 as along with 3 people krapnik j3xucite dgront
	Temperature-dependence of protein hydrogen bond properties as studied by high-resolution NMR. [My Copy] J Mol Biol, Vol. 317, No. 5. (12 April 2002), pp. 739-752. by F. Cordier, S. Grzesiek posted to h-bonds by lna on 2007-07-24 14:11:25 as
	An empirical approach to protein conformation stability and flexibility. [My Copy] Biopolymers, Vol. 22, No. 1. (January 1983), pp. 49-58. by T. E. Creighton posted to hydrophobicity by lna on 2007-07-24 14:09:24 as
	Integral equation study of hydrophobic interaction: a comparison between the simple point charge model for water and a Lennard-Jones model for solvent. [My Copy] J Chem Phys, Vol. 126, No. 14. (14 April 2007) by T. Sumi, H. Sekino posted to hydrophobicity by lna on 2007-07-24 12:22:20 as
	A fast method for the determination of fractional contributions to solvation in proteins. [My Copy] Protein Sci, Vol. 15, No. 11. (November 2006), pp. 2525-2533. by D. Talavera, A. Morreale, T. Meyer, et al.A. Hospital, C. Ferrer-Costa, J. L. Gelpi, X. de la Cruz, R. Soliva, F. J. Luque, M. Orozco posted to hydrophobicity by lna on 2007-07-20 14:59:26 as along with 2 people Lombardo_7 mijam
	On the heat-capacity change of pairwise hydrophobic interactions. [My Copy] J Chem Phys, Vol. 123, No. 3. (15 July 2005) by G. Graziano posted to hydrophobicity by lna on 2007-07-20 13:24:59 as
	Aliphatics vs. aromatics hydration thermodynamics. [My Copy] Biophys Chem, Vol. 110, No. 3. (1 August 2004), pp. 249-258. by G. Graziano posted to hydrophobicity by lna on 2007-07-20 13:05:08 as
	Molecular lipophilicity in protein modeling and drug design. [My Copy] Curr Med Chem, Vol. 14, No. 4. (2007), pp. 393-415. by R. G. Efremov, A. O. Chugunov, T. V. Pyrkov, J. P. Priestle, A. S. Arseniev, E. Jacoby posted to hydrophobicity by lna on 2007-07-20 12:57:21 as along with 1 person LamBras
	Water clustering and percolation in low hydration DNA shells. [My Copy] J Phys Chem B, Vol. 111, No. 12. (29 March 2007), pp. 3258-3266. by I. Brovchenko, A. Krukau, A. Oleinikova, A. K. Mazur posted to hydrophobicity by lna on 2007-07-20 09:24:42 as

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na	4
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lna's library 445 articles Export

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