lptolik's arabidopsis [84 articles] Export

Recent papers added to lptolik's library classified by the tag arabidopsis. You can also see everyone's arabidopsis.

	Obligate Heterodimerization of Arabidopsis Phytochromes C and E and Interaction with the PIF3 Basic Helix-Loop-Helix Transcription Factor [My Copy] Plant Cell, Vol. 21, No. 3. (1 March 2009), pp. 786-799. by Ted Clack, Ahmed Shokry, Matt Moffet, Peng Liu, Michael Faul, Robert A. Sharrock posted to arabidopsis phy phytochrome prot_binding by lptolik on 2009-05-25 10:46:10 as
	In silico analysis of promoter regions from cold-induced genes in rice (Oryza sativa L.) and Arabidopsis thaliana reveals the importance of combinatorial control [My Copy] Bioinformatics (25 March 2009), btp172. by Angelica Lindlof, Marcus Brautigam, Aakash Chawade, Olof Olsson, Bjorn Olsson posted to arabidopsis eucariotic_transcription_regulation genetic_regulatory_networks networks by lptolik on 2009-05-15 09:44:57 as along with 1 person druvus
	A Light-Independent Allele of Phytochrome B Faithfully Recapitulates Photomorphogenic Transcriptional Networks [My Copy] Carcinogenesis, Vol. 2, No. 1., pp. 166-182. by Wei Hu, Yi-Shin Su, J. Clark Lagarias posted to arabidopsis phytochrome by lptolik on 2009-04-02 13:00:39 as
	Higher plants use LOV to perceive blue light [My Copy] Current Opinion in Plant Biology, Vol. 12, No. 1. (February 2009), pp. 69-74. by E. Demarsy, C. Fankhauser posted to arabidopsis blue_light light_sensing review by lptolik on 2009-02-21 15:08:50 as
	Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays [My Copy] Genome Biology, Vol. 10 (11 February 2009), R17. by Samuel, Steve A. Kay posted to arabidopsis circadian_clock eucariotic_transcription_regulation genetic_regulatory_networks by lptolik on 2009-02-19 09:48:21 as along with 2 people JohnBallam natstreet
	Kinomer v. 1.0: a database of systematically classified eukaryotic protein kinases [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D244-250. by David M. A. Martin, Diego Miranda-Saavedra, Geoffrey J. Barton posted to arabidopsis biocad database phosphoproteomic by lptolik on 2009-02-18 13:45:47 as along with 3 people hryk guhjy renatomilani
	STRING 8--a global view on proteins and their functional interactions in 630 organisms [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D412-416. by Lars J. Jensen, Michael Kuhn, Manuel Stark, et al.Samuel Chaffron, Chris Creevey, Jean Muller, Tobias Doerks, Philippe Julien, Alexander Roth, Milan Simonovic, Peer Bork, Christian von Mering posted to arabidopsis database by lptolik on 2009-02-18 13:21:45 as along with 15 people and 1 group carlk mitko ilyashl hagechouchin443 kshameer allysonlister chad_davis larsjuhljensen druvus guhjy renatomilani grahamc behindtherabbit kgutwin biehl Bioinformatics
	Detection of Spatial-Specific Phytochrome Responses Using Targeted Expression of Biliverdin Reductase in Arabidopsis [My Copy] Plant Physiol., Vol. 149, No. 1. (1 January 2009), pp. 424-433. by Sankalpi N. Warnasooriya, Beronda L. Montgomery posted to arabidopsis genetic_regulatory_networks by lptolik on 2009-02-09 15:42:33 as
	Osiris: an integrated promoter database for Oryza sativa L. [My Copy] Bioinformatics (15 October 2008), btn537. by Robert T. Morris, Timothy R. O'Connor, John J. Wyrick posted to arabidopsis database by lptolik on 2009-01-08 14:16:59 as along with 1 person druvus
	A new systematic computational approach to predicting target genes of transcription factors [My Copy] Nucl. Acids Res. (18 June 2007), gkm454. by Xinbin Dai, Ji He, Xuechun Zhao posted to arabidopsis data_analysis eucariotic_transcription_regulation modelling by lptolik on 2008-12-26 13:27:40 as along with 3 people GustavoLacerda druvus cabbagezs
	Whole genome transcriptome polymorphisms in Arabidopsis thaliana [My Copy] Genome Biology, Vol. 9, No. 11. (24 November 2008), R165. by Xu Zhang, Jake Byrnes, Thomas Gal, Wen H. Li, Justin Borevitz posted to arabidopsis by lptolik on 2008-12-14 16:19:36 as along with 4 people maren druvus natstreet pengchy
	Photoexcited CRY2 Interacts with CIB1 to Regulate Transcription and Floral Initiation in Arabidopsis [My Copy] Science, Vol. 322, No. 5907. (5 December 2008), pp. 1535-1539. by Hongtao Liu, Xuhong Yu, Kunwu Li, et al.John Klejnot, Hongyun Yang, Dominique Lisiero, Chentao Lin posted to arabidopsis blue_light light_sensing by lptolik on 2008-12-05 09:21:23 as
	Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends. [My Copy] Nature biotechnology, Vol. 26, No. 8. (9 August 2008), pp. 941-946. by Marcelo A. German, Manoj Pillay, Dong-Hoon H. Jeong, et al.Amit Hetawal, Shujun Luo, Prakash Janardhanan, Vimal Kannan, Linda A. Rymarquis, Kan Nobuta, Rana German, Emanuele De Paoli, Cheng Lu, Gary Schroth, Blake C. Meyers, Pamela J. Green posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-11-13 15:10:04 as along with 10 people and 2 groups guhjy valeriehilgers natstreet inesdesantiago GustavoLacerda heliopais giovenko jfr stajich megraw microRNA Mycology
	The nuclear localization signal and the C-terminal region of FHY1 are required for transmission of phytochrome A signals. [My Copy] Plant J, Vol. 40, No. 3. (November 2004), pp. 355-365. by M. Zeidler, Q. Zhou, X. Sarda, C. P. Yau, N. H. Chua posted to arabidopsis light_sensing phy signalling by lptolik on 2008-11-12 14:38:05 as along with 1 person and 1 group kengg Plantandetc
	Mutant screen distinguishes between residues necessary for light-signal perception and signal transfer by phytochrome B. [My Copy] PLoS genetics, Vol. 4, No. 8. (2008) by Y. Oka, T. Matsushita, N. Mochizuki, P. H. Quail, A. Nagatani posted to arabidopsis phy by lptolik on 2008-11-07 22:39:06 as along with 1 person drmacgregor
	Serial ChIP as a tool to investigate the co-localization or exclusion of proteins on plant genes [My Copy] Plant Methods, Vol. 4 (27 October 2008), 25. by Zidian Xie, Erich Grotewold posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-11-05 15:11:04 as
	Sequence Space Coverage, Entropy of Genomes and the Potential to Detect Non-Human DNA in Human Samples [My Copy] BMC Genomics, Vol. 9 (30 October 2008), 509. by Zhandong Liu, Santosh S. Venkatesh, Carlo C. Maley posted to arabidopsis dna e_coli electrostatics by lptolik on 2008-11-05 11:01:19 as
	Combinatorial interaction of light‐responsive elements plays a critical role in determining the response characteristics of light‐regulated promoters in <i>Arabidopsis</i> [My Copy] The Plant Journal, Vol. 15, No. 1. (1998), pp. 69-77. by Sudip Chattopadhyay, Pilar Puente, Xing2010wang Deng, Ning Wei posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-10-29 17:55:41 as
	Combinatorial interplay of promoter elements constitutes the minimal determinants for light and developmental control of gene expression in Arabidopsis. [My Copy] The EMBO journal, Vol. 15, No. 14. (15 July 1996), pp. 3732-3743. by P. Puente, N. Wei, X. W. Deng posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-10-29 17:55:03 as
	Direct targeting of light signals to a promoter element-bound transcription factor. [My Copy] Science, Vol. 288, No. 5467. (5 May 2000), pp. 859-863. by J. F. Martínez-García, E. Huq, P. H. Quail posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-10-29 17:20:35 as along with 1 person and 1 group kengg Plantandetc
	The late elongated hypocotyl Mutation of Arabidopsis Disrupts Circadian Rhythms and the Photoperiodic Control of Flowering [My Copy] Cell, Vol. 93, No. 7. (June 1998), pp. 1219-1229. by R. Schaffer posted to arabidopsis lhy by lptolik on 2008-10-29 15:25:45 as
	Network Discovery Pipeline Elucidates Conserved Time-of-Day-Specific cis-Regulatory Modules. [My Copy] PLoS Genet, Vol. 4, No. 2. (1 February 2008) by Todd P P. Michael, Todd C C. Mockler, Ghislain Breton, et al.Connor McEntee, Amanda Byer, Jonathan D D. Trout, Samuel P P. Hazen, Rongkun Shen, Henry D D. Priest, Christopher M M. Sullivan, Scott A A. Givan, Marcelo Yanovsky, Fangxin Hong, Steve A A. Kay, Joanne Chory posted to arabidopsis clock eucariotic_transcription_regulation by lptolik on 2008-10-28 17:15:31 as along with 2 people druvus natstreet
	Decoding of Light Signals by Plant Phytochromes and Their Interacting Proteins [My Copy] Annual Review of Plant Biology, Vol. 59, No. 1. (2008), pp. 281-311. by Gabyong Bae, Giltsu Choi posted to arabidopsis light_sensing review by lptolik on 2008-10-24 10:30:09 as
	Light perception and signalling in higher plants [My Copy] Current Opinion in Plant Biology, Vol. 6, No. 5. (October 2003), pp. 446-452. by P. Gyula posted to arabidopsis light_sensing by lptolik on 2008-10-23 17:28:51 as
	Gating of the rapid shade-avoidance response by the circadian clock in plants [My Copy] Nature, Vol. 426, No. 6967. (11 December 2003), pp. 680-683. by Michael G. Salter, Keara A. Franklin, Garry C. Whitelam posted to arabidopsis light_sensing by lptolik on 2008-10-23 16:37:23 as
	Independent and interdependent functions of LAF1 and HFR1 in phytochrome A signaling. [My Copy] Genes & development, Vol. 21, No. 16. (15 August 2007), pp. 2100-2111. by I. C. Jang, S. W. Yang, J. Y. Yang, N. H. Chua posted to arabidopsis eucariotic_transcription_regulation light_sensing by lptolik on 2008-10-22 13:47:52 as
	Phytochrome-regulated Gene Expression [My Copy] Journal of Integrative Plant Biology, Vol. 49, No. 1. (January 2007), pp. 11-20. by Quail, H. Peter posted to arabidopsis light_sensing networks by lptolik on 2008-10-21 17:59:34 as
	Paths through the phytochrome network [My Copy] Plant, Cell & Environment, Vol. 31, No. 5. (May 2008), pp. 667-678. by Eve-Marie Josse, Julia Foreman, Karen J. Halliday posted to arabidopsis phy by lptolik on 2008-10-21 16:36:21 as
	A Link between circadian-controlled bHLH factors and the APRR1/TOC1 quintet in Arabidopsis thaliana. [My Copy] Plant Cell Physiol, Vol. 44, No. 6. (June 2003), pp. 619-629. by T. Yamashino, A. Matsushika, T. Fujimori, et al.S. Sato, T. Kato, S. Tabata, T. Mizuno posted to arabidopsis light_sensing toc1 by lptolik on 2008-10-20 08:08:21 as along with 2 people and 1 group drmacgregor kengg Plantandetc
	Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome [My Copy] Science, Vol. 302, No. 5646. (31 October 2003), pp. 842-846. by Kayoko Yamada, Jun Lim, Joseph M. Dale, et al.Huaming Chen, Paul Shinn, Curtis J. Palm, Audrey M. Southwick, Hank C. Wu, Christopher Kim, Michelle Nguyen, Paul Pham, Rosa Cheuk, George Karlin-Newmann, Shirley X. Liu, Bao Lam, Hitomi Sakano, Troy Wu, Guixia Yu, Molly Miranda, Hong L. Quach, Matthew Tripp, Charlie H. Chang, Jeong M. Lee, Mitsue Toriumi, Marie M. Chan, Carolyn C. Tang, Courtney S. Onodera, Justine M. Deng, Kenji Akiyama, Yasser Ansari, Takahiro Arakawa, Jenny Banh, Fumika Banno, Leah Bowser, Shelise Brooks, Piero Carninci, Qimin Chao, Nathan Choy, Akiko Enju, Andrew D. Goldsmith, Mani Gurjal, Nancy F. Hansen, Yoshihide Hayashizaki, Chanda Johnson-Hopson, Vickie W. Hsuan, Kei Iida, Meagan Karnes, Shehnaz Khan, Eric Koesema, Junko Ishida, Paul X. Jiang, Ted Jones, Jun Kawai, Asako Kamiya, Cristina Meyers, Maiko Nakajima, Mari Narusaka, Motoaki Seki, Tetsuya Sakurai, Masakazu Satou, Racquel Tamse, Maria Vaysberg, Erika K. Wallender, Cecilia Wong, Yuki Yamamura, Shiaulou Yuan, Kazuo Shinozaki, Ronald W. Davis, Athanasios Theologis, Joseph R. Ecker posted to arabidopsis eucariotic_transcription_regulation by lptolik on 2008-10-19 13:50:27 as along with 4 people and 1 group ThomasDOtto sdinka kaspermunch xwbcn Bioinformatics
	Site-Specific Phosphorylation Profiling of Arabidopsis Proteins by Mass Spectrometry and Peptide Chip Analysis [My Copy] J. Proteome Res. (24 April 2008) by de La, Dorothea Anrather, Ilse Dohnal, et al.Elisabeth Roitinger, Edina Csaszar, Jos Joore, Joshua Buijnink, Alessandro Carreri, Celine Forzani, Zdravko J. Lorkovic, Andrea Barta, David Lecourieux, Andreas Verhounig, Claudia Jonak, Heribert Hirt posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 15:47:42 as along with 3 people neils cjhall brianb
	Using phosphoproteomics to reveal signalling dynamics in plants. [My Copy] Trends Plant Sci, Vol. 12, No. 9. (September 2007), pp. 404-411. by S. de la Fuente van Bentem, H. Hirt posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 15:35:58 as along with 1 person guhjy
	Compilation and Characterization of Arabiopsis thaliana Response Regulators Implicated in His-Asp Phosphorelay Signal Transduction [My Copy] Plant Cell Physiol., Vol. 40, No. 7. (1 January 1999), pp. 733-742. by Aya Imamura, Naoto Hanaki, Ayako Nakamura, et al.Tomomi Suzuki, Mitsutaka Taniguchi, Takatoshi Kiba, Chiharu Ueguchi, Tatsuo Sugiyama, Takeshi Mizuno posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 14:51:53 as
	His-Asp phosphorelay signaling: a communication avenue between plants and their environment [My Copy] Plant Molecular Biology, Vol. 42, No. 2. (1 January 2000), pp. 273-278. by Hitoshi Sakakibara, Mitsutaka Taniguchi, Tatsuo Sugiyama posted to arabidopsis signalling by lptolik on 2008-10-17 09:25:57 as
	Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database. [My Copy] Plant Cell, Vol. 16, No. 9. (September 2004), pp. 2394-2405. by T. S. Nühse, A. Stensballe, O. N. Jensen, S. C. Peck posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 08:44:31 as
	Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism [My Copy] Nucl. Acids Res., Vol. 34, No. 11. (17 July 2006), pp. 3267-3278. by de La, Dorothea Anrather, Elisabeth Roitinger, et al.Armin Djamei, Thomas Hufnagl, Andrea Barta, Edina Csaszar, Ilse Dohnal, David Lecourieux, Heribert Hirt posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 08:40:14 as
	Phosphoproteomics in Arabidopsis: moving from empirical to predictive science [My Copy] Journal of Experimental Botany, Vol. 57, No. 7. (April 2006), pp. 1523-1527. by Peck, C. Scott posted to arabidopsis phosphoproteomic by lptolik on 2008-10-17 08:38:30 as
	Post-translational regulation of the Arabidopsis circadian clock through selective proteolysis and phosphorylation of pseudo- response regulator proteins [My Copy] J. Biol. Chem. (18 June 2008), M803471200. by Sumire Fujiwara, Lei Wang, Linqu Han, et al.Sung-Suk Suh, Patrice A. Salome, Robertson C. Mcclung, David E. Somers posted to arabidopsis circadian_clock by lptolik on 2008-10-14 14:03:38 as along with 4 people kengg drmacgregor jmjimenez Borelli
	Distinct Light and Clock Modulation of Cytosolic Free Ca2+ Oscillations and Rhythmic CHLOROPHYLL A/B BINDING PROTEIN2 Promoter Activity in Arabidopsis [My Copy] Plant Cell, Vol. 19, No. 11. (1 November 2007), pp. 3474-3490. by Xiaodong Xu, Carlos T. Hotta, Antony N. Dodd, et al.John Love, Robert Sharrock, Young W. Lee, Qiguang Xie, Carl H. Johnson, Alex A. Webb posted to arabidopsis ca circadian_clock light_sensing by lptolik on 2008-10-14 12:11:38 as
	The CRY1 Blue Light Photoreceptor of Arabidopsis Interacts with Phytochrome A In Vitro [My Copy] Molecular Cell, Vol. 1, No. 7. (June 1998), pp. 939-948. by M. Ahmad, J. Jarillo, O. Smirnova, A. Cashmore posted to arabidopsis blue_light light_sensing red_light by lptolik on 2008-10-13 16:53:54 as along with 1 person drmacgregor
	PKS1, a Substrate Phosphorylated by Phytochrome That Modulates Light Signaling in Arabidopsis [My Copy] Science, Vol. 284, No. 5419. (28 May 1999), pp. 1539-1541. by Christian Fankhauser, Kuo-Chen Yeh, J. Clark, et al. Lagarias, Hong Zhang, Tedd D. Elich, Joanne Chory posted to arabidopsis light_sensing by lptolik on 2008-10-13 16:45:03 as
	Quantitative Analysis of Drosophila period Gene Transcription in Living Animals [My Copy] J Biol Rhythms, Vol. 12, No. 3. (1 June 1997), pp. 204-217. by Jeffrey D. Plautz, Martin Straume, Ralf Stanewsky, et al.Creston F. Jamison, Christian Brandes, Harold B. Dowse, Jeffrey C. Hall, Steve A. Kay posted to arabidopsis circadian_clock data_representation by lptolik on 2008-10-13 15:59:17 as
	Phytochrome-Specific Type 5 Phosphatase Controls Light Signal Flux by Enhancing Phytochrome Stability and Affinity for a Signal Transducer [My Copy] Cell, Vol. 120, No. 3. (11 February 2005), pp. 395-406. by J. Ryu, J. Kim, T. Kunkel, et al.B. Kim, D. Cho, S. Hong, S. Kim, A. Fernandez, Y. Kim, J. Alonso posted to arabidopsis light_sensing phy pp5 by lptolik on 2008-10-09 14:38:32 as
	ELF4 is a phytochrome-regulated component of a negative-feedback loop involving the central oscillator components CCA1 and LHY [My Copy] The Plant Journal, Vol. 44, No. 2. (2005), 300-313. by Elise posted to arabidopsis circadian_clock by lptolik on 2008-10-09 11:59:59 as
	Functional Characterization of Phytochrome Interacting Factor 3 for the Arabidopsis thaliana Circadian Clockwork [My Copy] Plant and Cell Physiology, Vol. 46, No. 10. (October 2005), pp. 1591-1602. by Andras Viczian, Stefan Kircher, Erzsebet Fejes, et al.Andrew J. Millar, Eberhard Schafer, Laszlo Kozma-Bognar, Ferenc Nagy posted to arabidopsis circadian_clock light_sensing by lptolik on 2008-10-09 10:36:44 as
	CIRCADIAN CLOCK ASSOCIATED1 Transcript Stability and the Entrainment of the Circadian Clock in Arabidopsis [My Copy] Plant Physiol., Vol. 145, No. 3. (1 November 2007), pp. 925-932. by Esther Yakir, Dror Hilman, Miriam Hassidim, Rachel M. Green posted to arabidopsis circadian_clock light_sensing by lptolik on 2008-10-07 16:42:16 as along with 1 person drmacgregor
	The short-period mutant, toc1-1, alters circadian clock regulation of multiple outputs throughout development in Arabidopsis thaliana. [My Copy] Development (Cambridge, England), Vol. 125, No. 3. (February 1998), pp. 485-494. by D. E. Somers, A. A. Webb, M. Pearson, S. A. Kay posted to arabidopsis circadian_clock by lptolik on 2008-10-07 11:14:59 as
	Environmental and genetic effects on circadian clock-regulated gene expression in Arabidopsis. [My Copy] The Plant cell, Vol. 9, No. 3. (March 1997), pp. 297-304. by J. A. Kreps, A. E. Simon posted to arabidopsis circadian_clock by lptolik on 2008-10-07 11:13:10 as
	Genes encoding glycine-rich Arabidopsis thaliana proteins with RNA-binding motifs are influenced by cold treatment and an endogenous circadian rhythm. [My Copy] Plant physiology, Vol. 104, No. 3. (March 1994), pp. 1015-1025. by C. D. Carpenter, J. A. Kreps, A. E. Simon posted to arabidopsis circadian_clock by lptolik on 2008-10-07 11:10:10 as
	Mechanistic duality of transcription factor function in phytochrome signaling [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 6. (12 February 2008), pp. 2232-2237. by Bassem Al-Sady, Elise A. Kikis, Elena Monte, Peter H. Quail posted to arabidopsis light_sensing pifs by lptolik on 2008-10-06 14:58:02 as

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arabidopsis	84
eucariotic_transcription_regulation	47
networks	45
modelling	44
database	41
biocad	28
data_representation	27
data_analysis	26
light_sensing	23
circadian_clock	21
phys_props	21
model_checking	17
e_coli	13
genetic_regulatory_networks	13
phytochrome	13
software	12
graph_analysis	11
kinetic_modelling	10
phosphoproteomic	10
prot_binding	9
taverna	9
electrostatics	8
dna	7
optimization_technique	7
clock	6
r_library	6
data	5
phy	5
sbsi	5
text_mining	5
anom_behaviour_finding	4
cheminformatics	4
knowledge_capture	4
microarrays	4
review	4
blue_light	3
ca	3
clustering	3
protein_motif	3
signalling	3
temperature_compensation	3
cab2	2
cold_responce	2
lhy	2
metabolome	2
ontology	2
toc1	2
ccr2	1
cold_response	1
eucariotictranscriptioregulation	1
gr	1
image_analysis	1
parallel_computations	1
pharmacokinetic	1
pifs	1
pp5	1
proteomics	1
red_light	1
stochastic_simulation	1
t	1
visualisation	1
wiki_based_systems	1

lptolik's arabidopsis [84 articles] Export

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