lukzky's library 42 articles Export

	Short-distance probes for protein backbone structure based on energy transfer between bimane and transition metal ions. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 38. (22 September 2009), pp. 16227-16232. by Justin W. Taraska, Michael C. Puljung, William N. Zagotta posted to no-tag by lukzky on 2009-11-02 14:07:11 as
	A conserved element that stabilizes the group II intron active site [My Copy] RNA, Vol. 14, No. 6. (June 2008), pp. 1048-1056. by Olga Fedorova, Anna M. Pyle posted to intron groupii domain d3 by lukzky on 2009-10-09 15:58:29 as
	Domains 2 and 3 Interact to Form Critical Elements of the Group II Intron Active Site [My Copy] Journal of Molecular Biology, Vol. 330, No. 2. (04 July 2003), pp. 197-209. by Olga Fedorova, Therese Mitros, Anna M. Pyle posted to j23 intron groupii domain d3 d2 by lukzky on 2009-10-09 14:50:39 as
	Group II introns deleted for multiple substructures retain self-splicing activity. [My Copy] Mol. Cell. Biol., Vol. 12, No. 5. (1 May 1992), pp. 1950-1958. by J. L. Koch, S. C. Boulanger, S. D. Dib-Hajj, S. K. Hebbar, P. S. Perlman posted to intron groupii domain deltetion by lukzky on 2009-10-07 11:53:16 as
	The architectural organization and mechanistic function of group II intron structural elements [My Copy] Current Opinion in Structural Biology, Vol. 8, No. 3. (June 1998), pp. 301-308. by P. Qin posted to splicing review intron groupii domain by lukzky on 2009-10-06 12:43:21 as
	Nonblinking and long-lasting single-molecule fluorescence imaging. [My Copy] Nature methods, Vol. 3, No. 11. (01 November 2006), pp. 891-893. by Ivan Rasnik, Sean A. McKinney, Taekjip Ha posted to antiblinking antifading smfret trolox by lukzky on 2009-08-05 18:55:56 as along with 3 people and 1 group samjlord yanjiang yusdi moernerlab
	The ins and outs of group II introns [My Copy] Trends in Genetics, Vol. 17, No. 6. (1 June 2001), pp. 322-331. by L. Bonen posted to groupii intron review by lukzky on 2009-07-31 19:06:58 as
	Isolation of subcellular fractions from the yeast Saccharomyces cerevisiae. [My Copy] Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.], Vol. Chapter 3 (May 2001) by S. E. Rieder, S. D. Emr posted to mitochondria purification by lukzky on 2009-07-31 16:11:36 as
	Systematic screening of nuclear encoded proteins involved in the splicing metabolism of group II introns in yeast mitochondria [My Copy] Gene, Vol. 354 (18 July 2005), pp. 72-79. by C. Luban, M. Beutel, U. Stahl, U. Schmidt posted to groupii intron protein screening by lukzky on 2009-07-31 15:42:21 as along with 1 person venancio
	Group II introns: structure, folding and splicing mechanism. [My Copy] Biological chemistry, Vol. 388, No. 7. (July 2007), pp. 665-678. by O. Fedorova, N. Zingler posted to catalysis folding groupii intron mechanism splicing by lukzky on 2009-07-28 21:06:52 as
	A Kinetic Intermediate that Regulates Proper Folding of a Group II Intron RNA [My Copy] Journal of Molecular Biology, Vol. 375, No. 2. (11 January 2008), pp. 572-580. by Christina Waldsich, Anna M. Pyle posted to d1 folding groupii intron ribozyme by lukzky on 2009-07-28 20:25:26 as
	Divalent metal ions tune the self-splicing reaction of the yeast mitochondrial group II intron Sc .ai5γ [My Copy] Journal of Biological Inorganic Chemistry, Vol. 13, No. 6. (1 August 2008), pp. 1025-1036. by Michèle Erat, Roland Sigel posted to binding folding groupii inhibition intron metal by lukzky on 2009-07-28 20:22:46 as
	A folding control element for tertiary collapse of a group II intron ribozyme [My Copy] Nat Struct Mol Biol, Vol. 14, No. 1. (03 January 2007), pp. 37-44. by Christina Waldsich, Anna M. Pyle posted to 3rd-collapse d1 folding groupii intron ribozyme by lukzky on 2009-07-28 20:21:15 as
	Single-molecule enzymology of RNA: essential functional groups impact catalysis from a distance. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 27. (6 July 2004), pp. 10066-10071. by D. Rueda, G. Bokinsky, M. M. Rhodes, M. J. Rust, X. Zhuang, N. G. Walter posted to residues single smfret tracking by lukzky on 2009-07-28 20:18:34 as
	On the Mechanism of Trolox as Antiblinking and Antibleaching Reagent [My Copy] Journal of the American Chemical Society, Vol. 131, No. 14. (15 April 2009), pp. 5018-5019. by Thorben Cordes, Jan Vogelsang, Philip Tinnefeld posted to antiblinking antifading fret trolox by lukzky on 2009-07-28 20:17:23 as along with 2 people and 1 group alexknight samjlord moernerlab
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted to dna flourescence polymerization sequencing single-molecule by lukzky on 2009-02-25 10:36:58 as along with 37 people and 3 groups operon n00c kinestetika mtagaya jlgreen dna idoerg absterga ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi cactus jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani samjlord Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown iSEEM moernerlab Bioinformatics - CRUK
	Pathways of chaperone-mediated protein folding in the cytosol [My Copy] Nat Rev Mol Cell Biol, Vol. 5, No. 10. (October 2004), pp. 781-791. by Jason C. Young, Vishwas R. Agashe, Katja Siegers, F. Ulrich Hartl posted to folding protein review by lukzky on 2009-02-10 14:19:37 as along with 4 people and 1 group absterga thegoose2 tharris inbetweener C. elegans / WormBase
	Molecular guardians for newborn proteins: ribosome-associated chaperones and their role in protein folding [My Copy] Cellular and Molecular Life Sciences (CMLS), Vol. 62, No. 23. (11 December 2005), pp. 2727-2738. by R. Wegrzyn, E. Deuerling posted to chaperones folding protein by lukzky on 2009-02-10 14:04:46 as
	Protein Misfolding, Functional Amyloid, and Human Disease [My Copy] Annual Review of Biochemistry, Vol. 75, No. 1. (2006), pp. 333-366. by Fabrizio Chiti, Christopher M. Dobson posted to amyloids review by lukzky on 2009-02-10 08:49:43 as along with 4 people aip inbetweener allmensch jennifermbui
	Protein folding includes oligomerization examples from the endoplasmic reticulum and cytosol [My Copy] FEBS Journal, Vol. 275, No. 19. (October 2008), pp. 4700-4727. by Christis, Chantal, Lubsen, H. Nicolette, Braakman, Ineke posted to folding protein review by lukzky on 2009-02-10 08:47:22 as
	A Red Cy3-Based Biarsenical Fluorescent Probe Targeted to a Complementary Binding Peptide [My Copy] J. Am. Chem. Soc. (22 June 2007) by H. Cao, Y. Xiong, T. Wang, B. Chen, T. C. Squier, M. U. Mayer posted to bioconjugation fluorophores fret by lukzky on 2009-02-09 21:33:40 as along with 2 people and 1 group ts3435 samjlord moernerlab
	Selective Recognition of Protein Tetraserine Motifs with a Cell-Permeable, Pro-fluorescent Bis-boronic Acid [My Copy] Journal of the American Chemical Society, Vol. 0, No. 0. (0000) by Tiffany L. Halo, Jacob Appelbaum, Elissa M. Hobert, Daniel M. Balkin, Alanna Schepartz posted to bioconjugation fluorophores fret by lukzky on 2009-02-09 21:33:12 as along with 1 person and 1 group samjlord moernerlab
	New Biarsenical Ligands and Tetracysteine Motifs for Protein Labeling in Vitro and in Vivo: Synthesis and Biological Applications [My Copy] J. Am. Chem. Soc., Vol. 124, No. 21. (29 May 2002), pp. 6063-6076. by S. R. Adams, R. E. Campbell, L. A. Gross, et al.B. R. Martin, G. K. Walkup, Y. Yao, J. Llopis, R. Y. Tsien posted to bioconjugation fluorophores fret by lukzky on 2009-02-09 21:04:08 as along with 3 people and 1 group daericks ts3435 samjlord moernerlab
	Selective Chemical Labeling of Proteins with Small Fluorescent Molecules Based on Metal-Chelation Methodology [My Copy] Sensors (13 February 2008) by Nobuaki Soh posted to bioconjugation fluorophores fret method by lukzky on 2009-02-09 21:03:08 as
	Specific Covalent Labeling of Recombinant Protein Molecules Inside Live Cells [My Copy] Science, Vol. 281, No. 5374. (10 July 1998), pp. 269-272. by Albert B. Griffin, Stephen R. Adams, Roger Y. Tsien posted to bioconjugation fluorophores invivo labeling by lukzky on 2009-02-09 20:37:24 as along with 4 people and 1 group marissalee daericks ts3435 samjlord moernerlab
	A FlAsH-based FRET approach to determine G protein–coupled receptor activation in living cells [My Copy] Nature Methods, Vol. 2, No. 3. (17 February 2005), pp. 171-176. by Carsten Hoffmann, Guido Gaietta, Moritz Bünemann, et al.Stephen R. Adams, Silke Oberdorff-Maass, Björn Behr, Jean-Pierre Vilardaga, Roger Y. Tsien, Mark H. Ellisman, Martin J. Lohse posted to bioconjugation fluorophores fret method by lukzky on 2009-02-09 19:03:58 as along with 5 people and 2 groups batallah dark_innocent Fritz samjlord amwands neurolit moernerlab
	Cooperative DNA Probing Using a Î²-CyclodextrinâDNA Conjugate and a Nucleobase-Specific Fluorescent Ligand [My Copy] Journal of the American Chemical Society, Vol. 131, No. 4. (04 February 2009), pp. 1386-1387. by Toshihiro Ihara, Asuka Uemura, Akika Futamura, et al.Masamichi Shimizu, Noriyuki Baba, Seiichi Nishizawa, Norio Teramae, Akinori Jyo posted to dna fluorescence gap probing by lukzky on 2009-02-04 16:10:43 as
	Mitochondria and Ca2+ signaling: old guests, new functions [My Copy] Pflügers Archiv European Journal of Physiology, Vol. 455, No. 3. (1 December 2007), pp. 375-396. by Wolfgang Graier, Maud Frieden, Roland Malli posted to ca mitochondria by lukzky on 2009-01-09 21:55:27 as along with 2 people guhjy CharlesM
	Fluorescent HIV-1 Dimerization Initiation Site: design, properties, and use for ligand discovery. [My Copy] Journal of the American Chemical Society, Vol. 129, No. 11. (21 March 2007), pp. 3257-3266. by V. K. Tam, D. Kwong, Y. Tor posted to binding hiv rna spectroscopy by lukzky on 2009-01-08 22:43:08 as
	New insights into the formation of HIV-1 reverse transcription initiation complex [My Copy] Biochimie, Vol. 89, No. 10. (October 2007), pp. 1204-1210. by P. Barraud, C. Gaudin, F. Dardel, C. Tisne posted to binding hiv nmr rna spectroscopy by lukzky on 2009-01-08 22:33:03 as
	Structural biology of HIV [My Copy] Journal of Molecular Biology, Vol. 285, No. 1. (8 January 1999), pp. 1-32. by Brian G. Turner, Michael F. Summers posted to hiv structure by lukzky on 2008-12-30 19:16:16 as along with 1 person KevinVanCalster
	A single-molecule study of RNA catalysis and folding. [My Copy] Science, Vol. 288, No. 5473. (16 June 2000), pp. 2048-2051. by X. Zhuang, L. E. Bartley, H. P. Babcock, et al.R. Russell, T. Ha, D. Herschlag, S. Chu posted to intron ribozyme smfret by lukzky on 2008-12-30 19:13:50 as along with 3 people toerst haisent yusdi
	Slide into Action: Dynamic Shuttling of HIV Reverse Transcriptase on Nucleic Acid Substrates [My Copy] Science, Vol. 322, No. 5904. (14 November 2008), pp. 1092-1097. by Shixin Liu, Elio A. Abbondanzieri, Jason W. Rausch, Stuart F. Grice, Xiaowei Zhuang posted to hiv smfret by lukzky on 2008-12-10 09:36:12 as along with 3 people jbhiatt kieran101 pkner
	Analysis of single-molecule FRET trajectories using hidden Markov modeling. [My Copy] Biophysical journal, Vol. 91, No. 5. (1 September 2006), pp. 1941-1951. by S. A. McKinney, C. Joo, T. Ha posted to data-analysis hmm smfret software by lukzky on 2008-12-05 18:40:53 as along with 3 people doktornoe toerst waszak
	Pitfalls and limitations in the practical use of Forster's theory of resonance energy transfer [My Copy] Photochem. Photobiol. Sci. (2008) by Silvia E. Braslavsky, Eduard Fron, Hernan B. Rodriguez, et al.Enrique S. Roman, Gregory D. Scholes, Gerd Schweitzer, Bernard Valeur, Jakob Wirz posted to smfret theory by lukzky on 2008-11-29 11:48:39 as along with 2 people and 1 group melting samjlord moernerlab
	A practical guide to single-molecule FRET [My Copy] Nature Methods, Vol. 5, No. 6. (29 May 2008), pp. 507-516. by Rahul Roy, Sungchul Hohng, Taekjip Ha posted to methods smfret by lukzky on 2008-11-29 11:15:45 as along with 9 people and 1 group alexknight joseolucha toerst martainn guhjy Fritz samjlord waszak nahnah moernerlab
	Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter [My Copy] J. Bacteriol., Vol. 177, No. 14. (1 July 1995), pp. 4121-4130. by L. M. Guzman, D. Belin, M. J. Carson, J. Beckwith posted to expression pbad project by lukzky on 2008-11-28 15:13:59 as along with 1 person dbikard
	Structure of a complex of the ATPase SecA and the protein-translocation channel [My Copy] Nature, Vol. 455, No. 7215., pp. 936-943. by Jochen Zimmer, Yunsun Nam, Tom A. Rapoport posted to project structure translocation by lukzky on 2008-11-28 14:48:52 as along with 4 people lpierce cactus zwang neils
	X-ray structure of a protein-conducting channel. [My Copy] Nature, Vol. 427, No. 6969. (1 January 2004), pp. 36-44. by B. Van den Berg, W. M. Clemons, I. Collinson, et al.Y. Modis, E. Hartmann, S. C. Harrison, T. A. Rapoport posted to structure translocation by lukzky on 2008-11-28 14:48:01 as
	Femtosecond diffractive imaging with a soft-X-ray free-electron laser [My Copy] Nat Phys, Vol. 2, No. 12. (December 2006), pp. 839-843. by Henry N. Chapman, Anton Barty, Michael J. Bogan, et al.Sebastien Boutet, Matthias Frank, Stefan P. Hau-Riege, Stefano Marchesini, Bruce W. Woods, Sasa Bajt, W. Henry Benner, Richard A. London, Elke Plonjes, Marion Kuhlmann, Rolf Treusch, Stefan Dusterer, Thomas Tschentscher, Jochen R. Schneider, Eberhard Spiller, Thomas Moller, Christoph Bostedt, Matthias Hoener, David A. Shapiro, Keith O. Hodgson, David van der Spoel, Florian Burmeister, Magnus Bergh, Carl Caleman, Gosta Huldt, Marvin M. Seibert, Filipe R. N. C. Maia, Richard W. Lee, Abraham Szoke, Nicusor Timneanu, Janos Hajdu posted to xfel by lukzky on 2008-11-28 14:37:28 as along with 7 people proposals oxygen pick600 FilipeMaia michaelbussmann r2s2 massivemayhem
	Stepwise evolution of protein native structure with electrospray into the gas phase, 10−12 to 102 s [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 47. (25 November 2008), pp. 18145-18152. by Kathrin Breuker, Fred W. Mclafferty posted to massspec project by lukzky on 2008-11-28 14:25:57 as
	Single-molecule FRET measures bends and kinks in DNA [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 47. (25 November 2008), pp. 18337-18342. by Anna K. Woźniak, Gunnar F. Schröder, Helmut Grubmüller, Claus A. Seidel, Filipp Oesterhelt posted to smfret by lukzky on 2008-11-28 14:12:14 as along with 1 person haisent

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intron	11
groupii	10
smfret	8
folding	7
bioconjugation	6
fluorophores	6
fret	6
review	5
domain	4
hiv	4
protein	4
binding	3
project	3
ribozyme	3
structure	3
antiblinking	2
antifading	2
d1	2
d3	2
dna	2
method	2
mitochondria	2
rna	2
spectroscopy	2
splicing	2
translocation	2
trolox	2
3rd-collapse	1
amyloids	1
ca	1
catalysis	1
chaperones	1
d2	1
data-analysis	1
deltetion	1
expression	1
flourescence	1
fluorescence	1
gap	1
hmm	1
inhibition	1
invivo	1
j23	1
labeling	1
massspec	1
mechanism	1
metal	1
methods	1
nmr	1
pbad	1
polymerization	1
probing	1
purification	1
residues	1
screening	1
sequencing	1
single	1
single-molecule	1
software	1
theory	1
tracking	1
xfel	1

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