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lusk's eisen_journal_club [18 articles]

Recent papers added to lusk's library classified by the tag eisen_journal_club. You can also see everyone's eisen_journal_club.
  • Programming gene expression with combinatorial promoters
    Mol Syst Biol, Vol. 3 (13 November 2007)
    by Robert S Cox, Michael G Surette, Michael B Elowitz
    posted to eisen_journal_club ryan_presented by lusk on 2008-03-28 22:33:23 as ** along with 14 people and 2 groups Retchless tmmurali austin dpollard balicea kengg dbikard margaritis cjeans zwang discreteonyxorb cabbagezs Ema tresch EisenLab SynBioSys
  • High-throughput sequence alignment using Graphics Processing Units
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney
    posted to eisen_journal_club stuart_presented by lusk on 2008-03-28 22:32:51 as ** along with 10 people and 1 group Yanno jyuh sephy laughcry nedwards mdimon cndewey heliopais urgi tpreeprem gatech-compgenomics
  • Pleiotropic scaling of gene effects and the ‘cost of complexity’
    Nature, Vol. 452, No. 7186., pp. 470-472.
    by Günter P Wagner, Jane P Kenney-Hunt, Mihaela Pavlicev, Joel R Peck, David Waxman, James M Cheverud
    posted to colin_presented eisen_journal_club by lusk on 2008-03-28 22:32:14 as ** along with 2 people biomcgary natstreet
  • Shape and function of the Bicoid morphogen gradient in dipteran species with different sized embryos.
    Dev Biol (13 February 2008)
    by Thomas Gregor, Alistair P P McGregor, Eric F F Wieschaus
    posted to brant_presented eisen_journal_club by lusk on 2008-03-28 22:31:15 as ** along with 1 person emptyhb
  • Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e65.
    by Sushma Shivaswamy, Akshay Bhinge, Yongjun Zhao, Steven Jones, Martin Hirst, Vishwanath R Iyer
    posted to eisen_journal_club nucleosome rich_presented by lusk on 2008-03-28 22:30:43 as ** along with 2 people djkt vega
  • Evolution of chromosome organization driven by selection for reduced gene expression noise
    Nature Genetics, Vol. 39, No. 8. (27 July 2007), pp. 945-949.
    by Nizar N Batada, Laurence D Hurst
    posted to eisen_journal_club stuart_presented by lusk on 2007-08-12 22:28:16 as ** along with 5 people and 2 groups jjray dpollard ealloza djkt zwang EisenLab BioinfoCIPF
  • Flexible interaction of Drosophila Smad complexes with bipartite binding sites.
    Biochim Biophys Acta, Vol. 1769, No. 7-8. (g 2007), pp. 484-496.
    by S Gao, A Laughon
    posted to brant_presented eisen_journal_club by lusk on 2007-08-12 22:22:06 as **
  • Human gene organization driven by the coordination of replication and transcription
    Genome Res. (3 August 2007), gr.6533407.
    by Maxime Huvet, Samuel Nicolay, Marie Touchon, Benjamin Audit, Yves D'aubenton-Carafa, Alain Arneodo, Claude Thermes
    posted to danr_presented eisen_journal_club by lusk on 2007-08-12 22:21:32 as ** along with 4 people operon djkt cabbagezs bpcusack
  • A periodic pattern of SNPs in the human genome
    Genome Res. (2 August 2007), gr.6223207.
    by Bo E Madsen, Palle Villesen, Carsten Wiuf
    posted to danr_presented eisen_journal_club by lusk on 2007-08-12 22:20:47 as ** along with 2 people and 3 groups dchughes ljs Bioinformatics G4ID Genetics-of-Gambling
  • Large-scale analysis of transcriptional cis-regulatory modules reveals both common features and distinct subclasses
    Genome Biology, Vol. 8 (05 June 2007), R101.
    by Long Li, Qianqian Zhu, Xin He, Saurabh Sinha, Marc S Halfon
    posted to eisen_journal_club emily_presented by lusk on 2007-08-12 22:19:33 as ** along with 4 people and 1 group dpollard cjeans maximilianh isimpson EisenLab
  • Divergence of Transcription Factor Binding Sites Across Related Yeast Species
    Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819.
    by Anthony R Borneman, Tara A Gianoulis, Zhengdong D Zhang, Haiyuan Yu, Joel Rozowsky, Michael R Seringhaus, Lu Y Wang, Mark Gerstein, Michael Snyder
    posted to devin_presented eisen_journal_club rich_presented by lusk on 2007-08-12 22:19:04 as ** along with 17 people and 2 groups bryankr aalibes chad_davis dpollard djkt mikaelhuss cjeans sujaikumar zwang GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
  • Adaptation or biased gene conversion? Extending the null hypothesis of molecular evolution.
    Trends Genet (4 April 2007)
    by Nicolas Galtier, Laurent Duret
    posted to eisen_journal_club in_depth by lusk on 2007-04-20 19:44:12 as ** along with 6 people and 1 group devin gpalidwor cjeans Garamonfok bpcusack gjuggler EisenLab
  • An RNA gene expressed during cortical development evolved rapidly in humans
    Nature (16 August 2006)
    by Katherine S Pollard, Sofie R Salama, Nelle Lambert, Marie-Alexandra Lambot, Sandra Coppens, Jakob S Pedersen, Sol Katzman, Bryan King, Courtney Onodera, Adam Siepel, Andrew D Kern, Colette Dehay, Haller Igel, Manuel Ares, Pierre Vanderhaeghen, David Haussler
    posted to eisen_journal_club in_depth by lusk on 2007-04-20 19:42:08 as ** along with 12 people and 3 groups carlfulp brian bpb marcius nickluscombe larios joshuashen ealloza ce2benna bpcusack nolodie rrhudson EBI-regulation BioinfoCIPF SGU-CIPF
  • Translational and rotational settings of H2A.Z nucleosomes across the Saccharomycescerevisiae genome
    Nature, Vol. 446, No. 7135., pp. 572-576.
    by Istvan Albert, Travis N Mavrich, Lynn P Tomsho, Ji Qi, Sara J Zanton, Stephan C Schuster, Franklin B Pugh
    posted to eisen_journal_club rich_presented round_robin by lusk on 2007-04-06 19:53:40 as ** along with 2 people and 1 group cwbrown vega EisenLab
  • Cooperative assembly of higher-order Notch complexes functions as a switch to induce transcription.
    Proc Natl Acad Sci U S A, Vol. 104, No. 7. (13 February 2007), pp. 2103-2108.
    by Y Nam, P Sliz, WS Pear, JC Aster, SC Blacklow
    posted to colin_presented eisen_journal_club round_robin by lusk on 2007-04-06 19:52:37 as ** along with 1 person jyuh
  • Global identification and characterization of transcriptionally active regions in the rice genome.
    PLoS ONE, Vol. 2 (2007)
    by L Li, X Wang, R Sasidharan, V Stolc, W Deng, H He, J Korbel, X Chen, W Tongprasit, P Ronald, R Chen, M Gerstein, X Wang Deng
    posted to devin_presented eisen_journal_club round_robin by lusk on 2007-04-06 19:51:32 as **
  • The evolutionary significance of cis-regulatory mutations
    Nature Reviews Genetics, Vol. 8, No. 3., pp. 206-216.
    by Gregory A Wray
    posted to eisen_journal_club round_robin stewart_presented by lusk on 2007-04-06 19:50:46 as ** along with 6 people and 4 groups brant dpollard dchughes mimulus_99 cisevol emptyhb EisenLab G4ID Genetics-of-Gambling cis-regulatory-evolution
  • Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila
    Nature, Vol. 445, No. 7123. (4 January 2007), pp. 82-85.
    by Cathy Haag-Liautard, Mark Dorris, Xulio Maside, Steven Macaskill, Daniel L Halligan, Brian Charlesworth, Peter D Keightley
    posted to eisen_journal_club round_robin stuart_presented by lusk on 2007-04-06 19:49:51 as ** along with 6 people and 1 group operon dpollard jri stajich ramensky gjuggler EisenLab
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