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macowell's foundationalsb [30 articles]

Recent papers added to macowell's library classified by the tag foundationalsb. You can also see everyone's foundationalsb.
  • Using two-component systems and other bacterial regulatory factors for the fabrication of synthetic genetic devices
    Meth Enzymol, Vol. 422 (Jan 2007), pp. 488-512.
    by Alexander J Ninfa, Stephen Selinsky, Nicolas Perry, Stephen Atkins, Qi X Song, Avi Mayo, David Arps, Peter Woolf, Mariette R Atkinson
    posted to foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl-homoserine lactones
    Mol Microbiol, Vol. 55, No. 3. (Feb 2005), pp. 712-23.
    by Cynthia H Collins, Frances H Arnold, Jared R Leadbetter
    posted to 4-butyrolactone bacterial directed evolution expression fischeri fluorescent gene genetic green models molecular mutagenesis mutation proteins regulation repressor signal site-directed trans-activators transcription transduction vibrio foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • From systems biology to synthetic biology
    Mol Syst Biol, Vol. 1 (Jan 2005)
    by George M Church
    posted to biological biology enhancement genetic models online systems foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Tuning genetic control through promoter engineering
    Proc Natl Acad Sci USA, Vol. 102, No. 36. (Sep 2005), pp. 12678-83.
    by Hal Alper, Curt Fischer, Elke Nevoigt, Gregory Stephanopoulos
    posted to bacterial cerevisiae coli engineering escherichia expression fungal gene genetic genetics library promoter regions regulation saccharomyces transcription foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Gene regulation at the single-cell level
    Science, Vol. 307, No. 5717. (Mar 2005), pp. 1962-5.
    by Nitzan Rosenfeld, Jonathan W Young, Uri Alon, Peter S Swain, Michael B Elowitz
    posted to bacterial bacteriophage cell coli computer-assisted cycle dna-binding escherichia expression factors fluorescence fluorescent fusion gene genetic genetics green image lambda luminescent mathematics microscopy models processing promoter proteins recombinant regions regulation repressor signal transcription transduction viral foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 person and 1 group jjray BUiGEM
  • Synthetic promoter libraries--tuning of gene expression
    Trends Biotechnol, Vol. 24, No. 2. (Feb 2006), pp. 53-5.
    by Karin Hammer, Ivan Mijakovic, Peter R Jensen
    posted to engineering expression gene genetic genetics library promoter regions foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • The economics of synthetic biology
    Mol Syst Biol, Vol. 3 (Jan 2007)
    by Joachim Henkel, Stephen M Maurer
    posted to biology biotechnology engineering genetic policy registry synthetic foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Biology by design: reduction and synthesis of cellular components and behaviour
    Journal of the Royal Society, Interface / the Royal Society, Vol. 4, No. 15. (Aug 2007), pp. 607-23.
    by Philippe Marguet, Frederick Balagadde, Cheemeng Tan, Lingchong You
    posted to foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Mammalian synthetic biology: Engineering of sophisticated gene networks
    J Biotechnol, Vol. 130, No. 4. (Jul 2007), pp. 329-45.
    by David Greber, Martin Fussenegger
    posted to foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:59 as ** along with 1 group BUiGEM
  • Production of isoprenoid pharmaceuticals by engineered microbes
    Nat Chem Biol, Vol. 2, No. 12. (Dec 2006), pp. 674-81.
    by Michelle CY Chang, Jay D Keasling
    posted to cerevisiae coli design drug engineering escherichia genetic saccharomyces terpenes foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Environmentally controlled invasion of cancer cells by engineered bacteria
    J Mol Biol, Vol. 355, No. 4. (Jan 2006), pp. 619-27.
    by Christopher J Anderson, Elizabeth J Clarke, Adam P Arkin, Christopher A Voigt
    posted to adhesins bacterial base cell coli count engineering escherichia expression fischeri gene genetic genetics humans hypoxia line neoplasms promoter proteins pseudotuberculosis regions regulation sequence tumor vectors vibrio yersinia foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Engineering life: building a fab for biology
    Sci Am, Vol. 294, No. 6. (Jun 2006), pp. 44-51.
    by Bio FAB Group, David Baker, George Church, Jim Collins, Drew Endy, Joseph Jacobson, Jay Keasling, Paul Modrich, Christina Smolke, Ron Weiss
    posted to analysis array bacteria biotechnology coli dna electronics engineering escherichia genetic oligonucleotide pharmaceutical sequence technology therapeutics foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • The engineering of gene regulatory networks
    Annual review of biomedical engineering, Vol. 5 (Jan 2003), pp. 179-206.
    by Mads Kaern, William J Blake, JJ Collins
    posted to animals engineering expression gene genetic humans models processes protein regulation stochastic transcription foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Combinatorial promoter design for engineering noisy gene expression
    Proc Natl Acad Sci USA, Vol. 104, No. 31. (Jul 2007), pp. 12726-31.
    by Kevin F Murphy, Gábor Balázsi, James J Collins
    posted to biology iettv logic synthetic transcription foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Idempotent Vector Design for Standard Assembly of Biobricks
    MIT Synthetic Biology Working Group (Mar 2006)
    by Tom Knight
    posted to foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Deoxyribozymes that recode sequence information
    Nucleic Acids Res, Vol. 34, No. 8. (Jan 2006), pp. 2166-72.
    by Jeffrey J Tabor, Matthew Levy, Andrew D Ellington
    posted to acid activation allosteric base catalysis catalytic chain conformation dna domain engineering enzyme ligases nucleic oligonucleotides pairing polymerase protein reaction regulation sequence specificity substrate foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Noise propagation in gene networks
    Science, Vol. 307, No. 5717. (Mar 2005), pp. 1965-9.
    by Juan M Pedraza, Alexander van Oudenaarden
    posted to bacterial coli dna-binding escherichia expression fluorescence fluorescent gene genes genetic genetics green isopropyl luminescent mathematics microscopy models processes promoter proteins regions regulation reporter repressor signal stochastic tetracyclines thiogalactoside transcription transduction viral foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Construction of a genetic toggle switch in Escherichia coli
    Nature, Vol. 403, No. 6767. (Jan 2000), pp. 339-42.
    by TS Gardner, CR Cantor, JJ Collins
    posted to bacterial coli dna-binding escherichia expression gene genes genetic genetics models plasmids processes promoter proteins regions regulation repressor stochastic transcription viral foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Simulation of prokaryotic genetic circuits
    Annual review of biophysics and biomolecular structure, Vol. 27 (Jan 1998), pp. 199-224.
    by HH Mcadams, A Arkin
    posted to bacteria bacterial cell cycle genes genetic homeostasis models physiology processes stochastic foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Genetic parts to program bacteria
    Curr Opin Biotechnol, Vol. 17, No. 5. (Oct 2006), pp. 548-57.
    by Christopher A Voigt
    posted to bacteria bacterial engineering expression gene genetic genome models proteins regulation foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • The engineer's approach to biology
    EMBO Rep, Vol. 7, No. 1. (Jan 2006), pp. 21-3.
    by Holger Breithaupt
    posted to biology biotechnology engineering humans molecular foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Synthetic biology: engineering Escherichia coli to see light
    Nature, Vol. 438, No. 7067. (Nov 2005), pp. 441-2.
    by Anselm Levskaya, Aaron A Chevalier, Jeffrey J Tabor, Zachary B Simpson, Laura A Lavery, Matthew Levy, Eric A Davidson, Alexander Scouras, Andrew D Ellington, Edward M Marcotte, Christopher A Voigt
    posted to agar bacterial biology coli color engineering escherichia expression fusion gene genes genetic kinases lac light microbial operon photography photoreceptors phycobilins phycocyanin phytochrome protein proteins recombinant regulation reporter tetrapyrroles foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Essential genes of a minimal bacterium
    Proc Natl Acad Sci USA, Vol. 103, No. 2. (Jan 2006), pp. 425-30.
    by John I Glass, Nacyra A Garcia, Nina Alperovich, Shibu Yooseph, Matthew R Lewis, Mahir Maruf, Clyde A Hutchison, Hamilton O Smith, Craig J Venter
    posted to bacterial data essential genes genitalium genome molecular mutation mycoplasma sequence foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • A perspective of synthetic biology: assembling building blocks for novel functions
    Biotechnol J, Vol. 1, No. 6. (Jun 2006), pp. 690-9.
    by Pengcheng Fu
    posted to biological biology biomimetics biotechnology computer engineering genetic integration models simulation systems foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein
    Nat Biotechnol, Vol. 22, No. 12. (Dec 2004), pp. 1567-72.
    by Nathan C Shaner, Robert E Campbell, Paul A Steinbach, Ben NG Giepmans, Amy E Palmer, Roger Y Tsien
    posted to acid amino animals anthozoa data engineering enhancement fluorescence genetic luminescent molecular mutagenesis protein proteins recombinant sequence site-directed spectrometry substitution foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • A synthetic oscillatory network of transcriptional regulators
    Nature, Vol. 403, No. 6767. (Jan 2000), pp. 335-8.
    by MB Elowitz, S Leibler
    posted to analysis bacterial biological clocks coli dna-binding escherichia fluorescent fourier genes genetic genetics green luminescent messenger models plasmids processes promoter proteins regions repressor rna stochastic transcription viral foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Foundations for engineering biology
    Nature, Vol. 438, No. 7067. (Nov 2005), pp. 449-53.
    by Drew Endy
    posted to biology biotechnology engineering evolution humans risk foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Systems biology as a foundation for genome-scale synthetic biology
    Curr Opin Biotechnol, Vol. 17, No. 5. (Oct 2006), pp. 488-92.
    by Christian L Barrett, Tae Y Kim, Hyun U Kim, Bernhard Palsson, Sang Y Lee
    posted to biological biology computational evolution genome models molecular software systems foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Dual selection enhances the signaling specificity of a variant of the quorum-sensing transcriptional activator LuxR
    Nat Biotechnol, Vol. 24, No. 6. (Jun 2006), pp. 708-12.
    by Cynthia H Collins, Jared R Leadbetter, Frances H Arnold
    posted to cell coli communication engineering enhancement escherichia genetic protein proteins recombinant repressor trans-activators foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
  • Genome transplantation in bacteria: changing one species to another
    Science, Vol. 317, No. 5838. (Aug 2007), pp. 632-8.
    by Carole Lartigue, John I Glass, Nina Alperovich, Rembert Pieper, Prashanth P Parmar, Clyde A Hutchison, Hamilton O Smith, Craig J Venter
    posted to foundationalsb syntheticbiology by macowell on 2007-08-16 21:20:58 as ** along with 1 group BUiGEM
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