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marcius's Wang [17 articles]

Recent papers posted to marcius's library by the author Wang. You can also see everyone's Wang.
  • A protein interaction network for pluripotency of embryonic stem cells
    Nature
    by Jianlong Wang, Sridhar Rao, Jianlin Chu, Xiaohua Shen, Dana N Levasseur, Thorold W Theunissen, Stuart H Orkin
    posted to protein_interactions stem_cells systems_biology by marcius on 2006-11-23 11:04:53 as ** along with 6 people and 2 groups kentsis wnpx yeastyboy Ao_Li2007 iris_2001 tdmckee BioinfoCIPF SGU-CIPF
  • An RNA folding algorithm including pseudoknots based on dynamic weighted matching.
    Comput Biol Chem, Vol. 30, No. 1. (February 2006), pp. 72-76.
    by H Liu, D Xu, J Shao, Y Wang
    posted to algorithms rna secondary_structure by marcius on 2006-11-16 17:44:25 as ** along with 1 person and 2 groups eckart_bindewald BioinfoCIPF SGU-CIPF
  • Principles of microRNA regulation of a human cellular signaling network.
    Mol Syst Biol, Vol. 2 (2006)
    by Q Cui, Z Yu, EO Purisima, E Wang
    posted to function genome human microrna by marcius on 2006-10-04 12:53:03 as ** along with 7 people and 3 groups bootsy okarsligil jfr tardigrade mtagaya ealloza maralena Bioinformatics BioinfoCIPF SGU-CIPF
  • KemaDom: a web server for domain prediction using kernel machine with local context.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by L Chen, W Wang, S Ling, C Jia, F Wang
    posted to ab-initio bioinformatics prediction protein_domains by marcius on 2006-09-11 09:35:21 as ** along with 1 person and 2 groups skhadar BioinfoCIPF SGU-CIPF
  • Exploiting sequence and structure homologs to identify protein-protein binding sites.
    Proteins, Vol. 62, No. 3. (15 March 2006), pp. 630-640.
    by JL Chung, W Wang, PE Bourne
    posted to bioinformatics evolution protein_interactions by marcius on 2006-09-07 17:22:13 as ** along with 2 people and 2 groups bicko ameetsoni BioinfoCIPF SGU-CIPF
  • A genomic code for nucleosome positioning
    Nature, Vol. 442, No. 7104. (19 July 2006), pp. 772-778.
    by Eran Segal, Yvonne Fondufe-Mittendorf, Lingyi Chen, Annchristine Thåström, Yair Field, Irene K Moore, Ji-Ping Z Wang, Jonathan Widom
    posted to nucleosome position by marcius on 2006-08-23 09:51:16 as ** along with 14 people and 10 groups kentsis aalibes alokm indigoviolet dchughes cconboy neveaire kengg johncumbers joshuashen joepickrell GustavoLacerda rschulz inesdesantiago Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID BioinfoCIPF SGU-CIPF Plantandetc Genetics-of-Gambling
  • A Genome-Wide Map of Conserved MicroRNA Targets in C. elegans.
    Curr Biol (1 February 2006)
    by Sabbi Lall, Dominic Grün, Azra Krek, Kevin Chen, Yi-Lu L Wang, Colin N N Dewey, Pranidhi Sood, Teresa Colombo, Nicolas Bray, Philip Macmenamin, Huey-Ling L Kao, Kristin C C Gunsalus, Lior Pachter, Fabio Piano, Nikolaus Rajewsky
    posted to genome ncrna by marcius on 2006-03-09 22:57:06 as ** along with 2 people and 3 groups andersbj mtagaya microRNA BioinfoCIPF SGU-CIPF
  • Organization of the Caenorhabditis elegans small non-coding transcriptome: Genomic features, biogenesis, and expression.
    Genome Res, Vol. 16, No. 1. (January 2006), pp. 20-29.
    by W Deng, X Zhu, G Skogerbø, Y Zhao, Z Fu, Y Wang, H He, L Cai, H Sun, C Liu, B Li, B Bai, J Wang, D Jia, S Sun, H He, Y Cui, Y Wang, D Bu, R Chen
    posted to genome ncrna by marcius on 2006-03-02 03:21:08 as ** along with 2 people and 4 groups imouthesmp bsmagic Bioinformatics BioinfoCIPF bioinplant SGU-CIPF
  • Modulation of microRNA processing and expression through RNA editing by ADAR deaminases
    Nature Structural & Molecular Biology, Vol. 13, No. 1. (20 December 2005), pp. 13-21.
    by Weidong Yang, Thimmaiah P Chendrimada, Qingde Wang, Miyoko Higuchi, Peter H Seeburg, Ramin Shiekhattar, Kazuko Nishikura
    posted to microrna rna structure by marcius on 2006-01-12 18:56:14 as ** along with 2 people and 2 groups cassj mtagaya BioinfoCIPF SGU-CIPF
  • Structural genomics analysis of alternative splicing and application to isoform structure modeling.
    Proc Natl Acad Sci U S A (14 December 2005)
    by Peng Wang, Bo Yan, Jun-Tao T Guo, Chindo Hicks, Ying Xu
    posted to bioinformatics evolution sequence structural_genomics structure_prediction by marcius on 2005-12-22 03:26:15 as ** along with 3 people and 2 groups Cortel shuns penka BioinfoCIPF SGU-CIPF
  • Progress in Modeling of Protein Structures and Interactions
    Science, Vol. 310, No. 5748. (28 October 2005), pp. 638-642.
    by Ora Schueler-Furman, Chu Wang, Phil Bradley, Kira Misura, David Baker
    posted to ab-initio bioinformatics biophysics cafasp comparative_modeling review structure_prediction by marcius on 2005-10-28 00:14:41 as read along with 12 people and 2 groups thaliana jwm vavi bicko KyuhoLee eweaver tny nickolay dgront rsantana mirzazadeh insectopalo BioinfoCIPF SGU-CIPF
  • The genome sequence of the malaria mosquito Anopheles gambiae.
    Science, Vol. 298, No. 5591. (4 October 2002), pp. 129-149.
    by RA Holt, GM Subramanian, A Halpern, GG Sutton, R Charlab, DR Nusskern, P Wincker, AG Clark, JM Ribeiro, R Wides, SL Salzberg, B Loftus, M Yandell, WH Majoros, DB Rusch, Z Lai, CL Kraft, JF Abril, V Anthouard, P Arensburger, PW Atkinson, H Baden, V de Berardinis, D Baldwin, V Benes, J Biedler, C Blass, R Bolanos, D Boscus, M Barnstead, S Cai, A Center, K Chaturverdi, GK Christophides, MA Chrystal, M Clamp, A Cravchik, V Curwen, A Dana, A Delcher, I Dew, CA Evans, M Flanigan, A Grundschober-Freimoser, L Friedli, Z Gu, P Guan, R Guigo, ME Hillenmeyer, SL Hladun, JR Hogan, YS Hong, J Hoover, O Jaillon, Z Ke, C Kodira, E Kokoza, A Koutsos, I Letunic, A Levitsky, Y Liang, JJ Lin, NF Lobo, JR Lopez, JA Malek, TC McIntosh, S Meister, J Miller, C Mobarry, E Mongin, SD Murphy, DA O'Brochta, C Pfannkoch, R Qi, MA Regier, K Remington, H Shao, MV Sharakhova, CD Sitter, J Shetty, TJ Smith, R Strong, J Sun, D Thomasova, LQ Ton, P Topalis, Z Tu, MF Unger, B Walenz, A Wang, J Wang, M Wang, X Wang, KJ Woodford, JR Wortman, M Wu, A Yao, EM Zdobnov, H Zhang, Q Zhao, S Zhao, SC Zhu, I Zhimulev, M Coluzzi, A della Torre, CW Roth, C Louis, F Kalush, RJ Mural, EW Myers, MD Adams, HO Smith, S Broder, MJ Gardner, CM Fraser, E Birney, P Bork, PT Brey, JC Venter, J Weissenbach, FC Kafatos, FH Collins, SL Hoffman
    posted to dna genome sequence by marcius on 2005-10-23 09:50:49 as ** along with 7 people and 4 groups Neeperando sdinka jwortman jmeppley meister1975 stajich niallhaslam Notre Dame Bioinformatics BioinfoCIPF SGU-CIPF Berkeley Mycology
  • MicroRNA identification based on sequence and structure alignment.
    Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3610-3614.
    by X Wang, J Zhang, F Li, J Gu, T He, X Zhang, Y Li
    posted to algorithms bioinformatics rna sequence_alignment structure_alignment by marcius on 2005-10-23 03:17:36 as *** along with 2 people and 2 groups eckart_bindewald bioinfo BioinfoCIPF SGU-CIPF
  • Assessment of fold recognition predictions in CASP6.
    Proteins (26 September 2005)
    by Guoli Wang, Yumi Jin, Roland L L Dunbrack
    posted to bioinformatics cafasp casp model_evaluation protein_threading by marcius on 2005-10-22 09:13:36 as ** along with 2 people and 2 groups nigham schuylrp BioinfoCIPF SGU-CIPF
  • Domain definition and target classification for CASP6.
    Proteins (26 September 2005)
    by Michael Tress, Chin-Hsien H Tai, Guoli Wang, Iakes Ezkurdia, Gonzalo López, Alfonso Valencia, Byungkook Lee, Roland L L Dunbrack
    posted to cafasp casp protein_domains by marcius on 2005-10-22 09:01:23 as *** along with 2 groups BioinfoCIPF SGU-CIPF
  • Comparing graph representations of protein structure for mining family-specific residue-based packing motifs.
    J Comput Biol, Vol. 12, No. 6. (g 2005), pp. 657-671.
    by J Huan, D Bandyopadhyay, W Wang, J Snoeyink, J Prins, A Tropsha
    posted to bioinformatics protein_structure by marcius on 2005-10-22 00:48:33 as ** along with 3 people and 2 groups pansapiens aalibes shuns BioinfoCIPF SGU-CIPF
  • Use of single point mutations in domain I of beta 2-glycoprotein I to determine fine antigenic specificity of antiphospholipid autoantibodies.
    J Immunol, Vol. 169, No. 12. (15 December 2002), pp. 7097-7103.
    by GM Iverson, S Reddel, EJ Victoria, KA Cockerill, YX Wang, MA Marti-Renom, A Sali, DM Marquis, SA Krilis, MD Linnik
    posted to immunology protein_structure by marcius on 2005-10-20 21:33:55 as read along with 2 groups BioinfoCIPF SGU-CIPF
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