marcius's protein_function [24 articles] Export

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	Bayesian search of functionally divergent protein subgroups and their function specific residues [My Copy] Bioinformatics, Vol. 22, No. 20. (15 October 2006), pp. 2466-2474. by Marttinen, Pekka, Corander, et al. Jukka, Toronen, Petri, Holm, Liisa posted to algorithms bioinformatics protein_function by marcius on 2006-10-20 13:21:03 as along with 2 groups BioinfoCIPF SGU-CIPF
	Protein molecular function prediction by Bayesian phylogenomics. [My Copy] PLoS computational biology, Vol. 1, No. 5. (7 October 2005) by B. E. Engelhardt, M. I. Jordan, K. E. Muratore, S. E. Brenner posted to bioinformatics prediction protein_function by marcius on 2006-09-07 17:43:33 as along with 9 people and 4 groups sgoetz engelhardt kentsis ana eoghanharr Einat dlr sriram_s bootsy structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Assigning new GO annotations to protein data bank sequences by combining structure and sequence homology. [My Copy] Proteins, Vol. 58, No. 4. (1 March 2005), pp. 855-865. by J. V. Ponomarenko, P. E. Bourne, I. N. Shindyalov posted to bioinformatics evolution protein_function protein_structure by marcius on 2006-09-07 17:24:49 as along with 2 groups BioinfoCIPF SGU-CIPF
	Introduction to informatics approaches in structural genomics: modeling and representation of function from macromolecular structure. [My Copy] Pac Symp Biocomput (2005), pp. 319-321. by P. C. Babbitt, P. E. Bourne, S. D. Mooney posted to protein_function structural_genomics by marcius on 2006-09-07 17:24:03 as along with 1 person and 2 groups penka BioinfoCIPF SGU-CIPF
	Functional Coverage of the Human Genome by Existing Structures, Structural Genomics Targets, and Homology Models. [My Copy] PLoS Comput Biol, Vol. 1, No. 3. (19 August 2005) by Lei Xie, Philip E E. Bourne posted to protein_function structural_genomics by marcius on 2006-09-07 17:23:24 as along with 2 people and 3 groups bicko caporaso biomedical-nlp BioinfoCIPF SGU-CIPF
	Probabilistic annotation of protein sequences based on functional classifications. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by E. D. Levy, C. A. Ouzounis, W. R. Gilks, B. Audit posted to algorithms bioinformatics protein_function statistics by marcius on 2006-09-07 17:17:23 as along with 2 people and 2 groups sgoetz shung BioinfoCIPF SGU-CIPF
	Revisiting the prediction of protein function at CASP6 [My Copy] FEBS Journal, Vol. 273, No. 13. (July 2006), pp. 2977-2983. by Pellegrini-Calace, Marialuisa, Soro, Simonetta, Tramontano, Anna posted to casp protein_function by marcius on 2006-08-31 17:02:04 as along with 2 groups BioinfoCIPF SGU-CIPF
	A comparative study of machine-learning methods to predict the effects of single nucleotide polymorphisms on protein function. [My Copy] Bioinformatics, Vol. 19, No. 17. (22 November 2003), pp. 2199-2209. by V. G. Krishnan, D. R. Westhead posted to bioinformatics protein_function snp by marcius on 2006-04-30 01:11:59 as along with 5 people and 3 groups chrn eweaver caporaso rlhsiao rsantana biomedical-nlp BioinfoCIPF SGU-CIPF
	Designed divergent evolution of enzyme function [My Copy] Nature, Vol. 440, No. 7087. (20 April 2006), pp. 1078-1082. by Yasuo Yoshikuni, Thomas E. Ferrin, Jay D. Keasling posted to bioinformatics evolution protein_function by marcius on 2006-04-20 21:51:55 as along with 5 people and 2 groups pablocarb ygygod lingchong tny dbikard BioinfoCIPF SGU-CIPF
	Automated discovery of 3D motifs for protein function annotation [My Copy] Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 723-730. by Benjamin J. Polacco, Patricia C. Babbitt posted to bioinformatics protein_function by marcius on 2006-04-04 00:31:57 as along with 3 people and 2 groups MarcoAlvarez eweaver rabio BioinfoCIPF SGU-CIPF
	PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (6 February 2006) by Marcin von Grotthuss, Dariusz Plewczynski, Krzysztof Ginalski, Leszek Rychlewski, Eugene I. Shakhnovich posted to bioinformatics databases protein_function protein_structure by marcius on 2006-02-27 20:16:54 as along with 2 people and 3 groups caporaso sim82 biomedical-nlp BioinfoCIPF SGU-CIPF
	Protein function prediction via graph kernels. [My Copy] Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005) by Karsten M. M. Borgwardt, Cheng, Stefan Schönauer, Sv N. V. Vishwanathan, Alex J. J. Smola, Hans-Peter P. Kriegel posted to bioinformatics classification clustering protein_function by marcius on 2006-02-17 20:36:39 as along with 9 people and 4 groups ajbattle MarcoAlvarez tmmurali okarsligil vavi lfriedl eweaver kt wnpx kdl Bioinformatics BioinfoCIPF SGU-CIPF
	PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks [My Copy] Bioinformatics, Vol. 22, No. 2. (15 January 2006), pp. 248-250. by Anais Baudot, David Martin, Alain Guenoche, Bernard Jacq, Christine Brun posted to bioinformatics genome protein_function protein_interactions by marcius on 2006-02-02 05:50:04 as along with 2 people and 2 groups eweaver maralena BioinfoCIPF SGU-CIPF
	Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information. [My Copy] Bioinformatics, Vol. 21, No. 13. (1 July 2005), pp. 2988-2993. by F. Al-Shahrour, R. Díaz-Uriarte, J. Dopazo posted to bioinformatics classification protein_function by marcius on 2006-01-17 19:11:48 as along with 4 people and 2 groups eweaver rdiaz ealloza Garamonfok BioinfoCIPF SGU-CIPF
	Beyond annotation transfer by homology: novel protein-function prediction methods to assist drug discovery. [My Copy] Drug Discov Today, Vol. 10, No. 21. (1 November 2005), pp. 1475-1482. by Y. Ofran, M. Punta, R. Schneider, B. Rost posted to bioinformatics protein_function review by marcius on 2006-01-13 23:55:53 as along with 3 people and 2 groups jwortman kuhn cjeans BioinfoCIPF SGU-CIPF
	Inferring functional information from domain co-evolution [My Copy] Bioinformatics, Vol. 22, No. 1. (1 January 2006), pp. 40-49. by Yohan Kim, Mehmet Koyuturk, Umut Topkara, Ananth Grama, Shankar Subramaniam posted to bioinformatics evolution protein_function by marcius on 2006-01-12 19:07:33 as along with 1 person and 2 groups eweaver BioinfoCIPF SGU-CIPF
	Improvement in protein functional site prediction by distinguishing structural and functional constraints on protein family evolution using computational design. [My Copy] Nucleic Acids Res, Vol. 33, No. 18. (2005), pp. 5861-5867. by Gong Cheng, Bin Qian, Ram Samudrala, David Baker posted to biophysics evolution protein_function protein_structure by marcius on 2005-11-02 09:14:59 as along with 6 people and 3 groups bicko Einat alexg nickolay sriram_s ladab structural_bioinformatics BioinfoCIPF SGU-CIPF
	Probing the beta2 adrenoceptor binding site with catechol reveals differences in binding and activation by agonists and partial agonists. [My Copy] J Biol Chem, Vol. 280, No. 23. (10 June 2005), pp. 22165-22171. by G. Swaminath, X. Deupi, T. W. Lee, et al.W. Zhu, F. S. Thian, T. S. Kobilka, B. Kobilka posted to biology biophysics protein_function by marcius on 2005-10-22 21:55:55 as along with 1 person and 3 groups xdeupi BioinfoCIPF LabCompMed SGU-CIPF
	Automatic annotation of protein function. [My Copy] Current opinion in structural biology, Vol. 15, No. 3. (June 2005), pp. 267-274. by Alfonso Valencia posted to bioinformatics protein_function review by marcius on 2005-10-22 09:02:45 as along with 7 people and 2 groups timhubbard sgoetz tjimenez dimka kuhn eweaver bootsy BioinfoCIPF SGU-CIPF
	The prediction of protein function at CASP6. [My Copy] Proteins (26 September 2005) by Simonetta Soro, Anna Tramontano posted to casp protein_function by marcius on 2005-10-22 08:55:56 as along with 2 groups BioinfoCIPF SGU-CIPF
	Systemic determinants of gene evolution and function [My Copy] Molecular Systems Biology, Vol. 1, No. 1. (13 September 2005), pp. msb4100029-E1-msb4100029-E2. by Eugene V. Koonin posted to evolution protein_function systems_biology by marcius on 2005-10-22 04:22:41 as along with 4 people and 3 groups ataheri Schmidtc bluto niallhaslam plant-development BioinfoCIPF SGU-CIPF
	The C-type lectin fold as an evolutionary solution for massive sequence variation [My Copy] Nature Structural & Molecular Biology In Nat Struct Mol Biol, Vol. 12, No. 10. (18 September 2005), pp. 886-892. by Stephen A. Mcmahon, Jason L. Miller, Jeffrey A. Lawton, et al.Donald E. Kerkow, Asher Hodes, Marc A. Marti-Renom, Sergei Doulatov, Eswar Narayanan, Andrej Sali, Jeff F. Miller, Partho Ghosh posted to computational_biology evolution immunology protein_function protein_structure by marcius on 2005-10-21 09:26:57 as along with 3 people and 4 groups taenneken stevanspringer ana structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Why highly expressed proteins evolve slowly. [My Copy] Proc Natl Acad Sci U S A (21 September 2005) by D Allan A. Drummond, Jesse D D. Bloom, Christoph Adami, Claus O O. Wilke, Frances H H. Arnold posted to evolution pleiotropy protein_function by marcius on 2005-10-21 02:44:11 as along with 17 people and 5 groups codonusage allmaya michaelbarton rklancer stevanspringer bjorns imouthesmp aprasad dayjm Einat xwbcn penka balabu malcook balicea RamuAnandakrishnan wilbur structural_bioinformatics Nie FAB-lab BioinfoCIPF SGU-CIPF
	Moonlighting proteins [My Copy] Trends in Biochemical Sciences, Vol. 24, No. 1. (1 January 1999), pp. 8-11. by Constance J. Jeffery posted to pleiotropy protein_function by marcius on 2005-10-21 02:42:03 as along with 3 people and 3 groups stevanspringer tny benlin FAB-lab BioinfoCIPF SGU-CIPF

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rna	213
bioinformatics	196
review	127
biophysics	90
protein_structure	86
structure	86
evolution	86
structure_prediction	64
algorithms	56
computational_biology	53
secondary_structure	53
protein	43
folding	41
classification	38
ncrna	35
casp	35
drug	32
docking	32
protein_interactions	31
genome	30
function	29
microrna	27
cafasp	26
sequence_alignment	25
protein_function	24
software	23
views	22
servers	22
comparative_modeling	19
model_assessment	19
statistical_potentials	19
biology	18
structural_genomics	18
databases	17
ribosome	16
nmr	16
disease	16
protein_domains	15
ligand	15
protein_folding	15
bioengineering	14
clustering	14
protein_fragments	14
ab-initio	12
structure_alignment	11
genes	11
prediction	11
dna	10
statistics	9
snp	9
alignment	9
model_evaluation	8
membrane_protein	7
experimental	7
gene_expression	6
systems_biology	6
microarray	6
phylogeny	6
virus	5
mechano_receptors	5
foce_field	5
sequence	5
protein_threading	5
motif	5
molecular_dynamics	5
text_mining	4
ribozyme	4
discovery	4
rotamers	4
sequence-structure	4
protein_complexes	3
cancer	3
comparative_docking	3
server	3
news	3
human	3
interaction	3
meeting	3
immunology	2
programming	2
hypotesis	2
allosteric	2
proteomics	2
editorial	2
pleiotropy	2
pdb	2
hts	2
trypsin	1
ontology	1
loop_modeling	1
proteases	1
metabolomics	1
opensourcebiology	1
nucleosome	1
side_chains	1
protein_disorder	1
protein_design	1
nanotechnology	1
membrane	1
stability	1
disulfide	1
position	1
web20	1
malaria	1
congress	1
synthetic_biology	1
fold	1
glyco	1
dynamics	1
machine_learning	1
mysql	1
aminoacid_alphabets	1
metagenomics	1
php	1
molecular_mimicry	1
stem_cells	1
consensus	1
plant	1

marcius's protein_function [24 articles] Export

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