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	Multidrug efflux transporter, AcrB--the pumping mechanism. [My Copy] Current opinion in structural biology, Vol. 18, No. 4. (August 2008), pp. 459-465. by Satoshi Murakami posted to 1paper 2paper 3review acrb drug-efflux by martainn on 2009-01-15 12:57:23 as along with 1 person tprpip
	A comprehensive and non-redundant database of protein domain movements [My Copy] Bioinformatics, Vol. 21, No. 12. (15 June 2005), pp. 2832-2838. by Guoying Qi, Richard Lee, Steven Hayward posted to 1paper crystallography docking software by martainn on 2008-10-10 17:24:22 as along with 3 people and 2 groups ana nigham higueruelo structural_bioinformatics Bioinformatics
	Mapping the topology and determination of a low-resolution three-dimensional structure of the calmodulin-melittin complex by chemical cross-linking and high-resolution FTICRMS: direct demonstration of multiple binding modes. [My Copy] Biochemistry, Vol. 43, No. 16. (27 April 2004), pp. 4703-4715. by D. M. Schulz, C. Ihling, G. M. Clore, A. Sinz posted to 1paper docking programs by martainn on 2008-10-10 17:23:13 as
	Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. [My Copy] Journal of bacteriology, Vol. 134, No. 3. (June 1978), pp. 1141-1156. by A. C. Chang, S. N. Cohen posted to 1paper by martainn on 2008-10-10 17:21:45 as
	Improved Structures of Full-Length p97, an AAA ATPase: Implications for Mechanisms of Nucleotide-Dependent Conformational Change [My Copy] Structure, Vol. 16, No. 5. (7 May 2008), pp. 715-726. by Jason M. Davies, Axel T. Brunger, William I. Weis posted to 1paper crystallography programs by martainn on 2008-10-10 17:20:04 as along with 1 person cactus
	PHENIX: building new software for automated crystallographic structure determination. [My Copy] Acta crystallographica. Section D, Biological crystallography, Vol. 58, No. Pt 11. (November 2002), pp. 1948-1954. by P. D. Adams, R. W. Grosse-Kunstleve, L. W. Hung, et al.T. R. Ioerger, A. J. McCoy, N. W. Moriarty, R. J. Read, J. C. Sacchettini, N. K. Sauter, T. C. Terwilliger posted to 1paper crystallography programs software by martainn on 2008-10-10 17:19:07 as
	Crystallography & NMR system: A new software suite for macromolecular structure determination. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 54 ( Pt 5) (1 September 1998), pp. 905-921. by A. T. Brünger, P. D. Adams, G. M. Clore, et al.W. L. DeLano, P. Gros, R. W. Grosse-Kunstleve, J. S. Jiang, J. Kuszewski, M. Nilges, N. S. Pannu, R. J. Read, L. M. Rice, T. Simonson, G. L. Warren posted to 1paper crystallography docking programs software by martainn on 2008-10-10 17:17:23 as along with 3 people and 2 groups laurabailey miorel jwm Radiation_Damage Stressosome
	The CCP4 suite: programs for protein crystallography. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 50, No. Pt 5. (1 September 1994), pp. 760-763. by posted to 1paper crystallography programs software by martainn on 2008-10-10 17:16:18 as along with 2 people and 2 groups jwm massivemayhem Radiation_Damage Stressosome
	Coot: model-building tools for molecular graphics [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 60, No. 1. (01 December 2004), pp. 2126-2132. by Emsley, P., Cowtan, K. posted to 1paper crystallography programs by martainn on 2008-10-10 17:14:34 as along with 3 people and 2 groups miorel jwm robert Radiation_Damage Stressosome
	Detecting folding motifs and similarities in protein structures. [My Copy] Methods in enzymology, Vol. 277 (1997), pp. 525-545. by G. J. Kleywegt, T. A. Jones posted to 1paper fold-evolution programs small-motifs by martainn on 2008-10-10 17:13:42 as
	XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density. [My Copy] Journal of structural biology, Vol. 125, No. 2-3. (y 1999), pp. 156-165. by D. E. McRee posted to 1paper crystallography programs by martainn on 2008-10-10 17:09:53 as
	A model of a transmembrane drug-efflux pump from Gram-negative bacteria. [My Copy] FEBS letters, Vol. 578, No. 1-2. (3 December 2004), pp. 5-9. by J. Fernandez-Recio, F. Walas, L. Federici, et al.J. Venkatesh Pratap, V. N. Bavro, R. N. Miguel, K. Mizuguchi, B. Luisi posted to 1paper 3review coiled-coils docking drug-efflux tolc by martainn on 2008-10-10 13:53:40 as
	Protein docking using spherical polar Fourier correlations. [My Copy] Proteins, Vol. 39, No. 2. (1 May 2000), pp. 178-194. by D. W. Ritchie, G. J. Kemp posted to 1paper docking programs by martainn on 2008-10-10 12:09:33 as along with 3 people and 1 group csrocha tjimenez bicko structural_bioinformatics
	HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets. [My Copy] Proteins, Vol. 69, No. 4. (1 December 2007), pp. 726-733. by S. J. de Vries, A. D. van Dijk, M. Krzeminski, et al.M. van Dijk, A. Thureau, V. Hsu, T. Wassenaar, A. M. Bonvin posted to 1paper docking programs by martainn on 2008-10-10 12:06:08 as along with 1 person chad_davis
	NORMA: a tool for flexible fitting of high-resolution protein structures into low-resolution electron-microscopy-derived density maps [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 62, No. 9. (01 September 2006), pp. 1098-1100. by Suhre, K., Navaza, J., Sanejouand, -H posted to 1paper crystallography dynamics programs by martainn on 2008-10-10 12:03:09 as along with 4 people and 1 group dawnsong apaydin aqeel yongzhao TSRI_MGL
	Structure of the periplasmic component of a bacterial drug efflux pump. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 27. (6 July 2004), pp. 9994-9999. by M. K. Higgins, E. Bokma, E. Koronakis, C. Hughes, V. Koronakis posted to 1paper 3review 4grant acra coiled-coils mexa structure tolc by martainn on 2008-10-10 11:34:49 as
	Aminoglycosides are captured from both periplasm and cytoplasm by the AcrD multidrug efflux transporter of Escherichia coli. [My Copy] Journal of bacteriology, Vol. 187, No. 6. (March 2005), pp. 1923-1929. by J. R. Aires, H. Nikaido posted to 1paper 3review by martainn on 2008-10-10 11:27:44 as
	Assembly and channel opening in a bacterial drug efflux machine. [My Copy] Molecular cell, Vol. 30, No. 1. (11 April 2008), pp. 114-121. by V. N. Bavro, Z. Pietras, N. Furnham, et al.L. Pérez-Cano, J. Fernández-Recio, X. Y. Pei, R. Misra, B. Luisi posted to 1paper 3review structure tolc by martainn on 2008-10-10 11:27:06 as
	Contribution of the MexX-MexY-oprM efflux system to intrinsic resistance in Pseudomonas aeruginosa. [My Copy] Antimicrobial agents and chemotherapy, Vol. 44, No. 9. (September 2000), pp. 2242-2246. by N. Masuda, E. Sakagawa, S. Ohya, N. Gotoh, H. Tsujimoto, T. Nishino posted to 1paper by martainn on 2008-10-10 11:22:07 as
	It takes three to tango. [My Copy] Nature biotechnology, Vol. 20, No. 12. (December 2002), pp. 1210-1212. by O. Lomovskaya, H. I. Zgurskaya, H. Nikaido posted to 1paper by martainn on 2008-10-10 11:20:49 as
	Multidrug resistance in Gram-negative bacteria. [My Copy] Current opinion in microbiology, Vol. 4, No. 5. (October 2001), pp. 500-508. by K. Poole posted to 1paper by martainn on 2008-10-10 11:20:05 as
	AcrAB and related multidrug efflux pumps of Escherichia coli. [My Copy] Journal of molecular microbiology and biotechnology, Vol. 3, No. 2. (April 2001), pp. 215-218. by H. Nikaido, H. I. Zgurskaya posted to 1paper by martainn on 2008-10-10 11:17:17 as
	Structure and function of TolC: the bacterial exit duct for proteins and drugs. [My Copy] Annu Rev Biochem, Vol. 73 (2004), pp. 467-489. by V. Koronakis, J. Eswaran, C. Hughes posted to 1paper 3review 4grant by martainn on 2008-10-10 11:15:39 as along with 1 person cam-flagella
	Core structure of gp41 from the HIV envelope glycoprotein. [My Copy] Cell, Vol. 89, No. 2. (18 April 1997), pp. 263-273. by D. C. Chan, D. Fass, J. M. Berger, P. S. Kim posted to 1paper 3review coiled-coils fold-evolution fusion virus by martainn on 2008-10-10 10:38:04 as
	Extended knobs-into-holes packing in classical and complex coiled-coil assemblies. [My Copy] Journal of structural biology, Vol. 144, No. 3. (December 2003), pp. 349-361. by John Walshaw, Derek N. Woolfson posted to 1paper coiled-coils docking evolution programs by martainn on 2008-10-07 13:01:24 as along with 4 people TLVincent kgutwin gbartbristol ca3295
	Fitting periplasmic membrane fusion proteins to inner membrane transporters: mutations that enable Escherichia coli AcrA to function with Pseudomonas aeruginosa MexB. [My Copy] J Bacteriol, Vol. 190, No. 2. (January 2008), pp. 691-698. by G. Krishnamoorthy, E. B. Tikhonova, H. I. Zgurskaya posted to 1paper 2discussion 3review acra acrb drug-efflux evolution mexa mutation by martainn on 2008-02-19 17:03:18 as
	Engineered disulfide bonds support the functional rotation mechanism of multidrug efflux pump AcrB. [My Copy] Nat Struct Mol Biol (27 January 2008) by Markus A A. Seeger, Christoph von Ballmoos, Thomas Eicher, et al.Lorenz Brandstätter, François Verrey, Kay Diederichs, Klaas M M. Pos posted to 1paper 3review acra acrb crosslinking drug-efflux structure by martainn on 2008-02-04 11:03:53 as
	Use of TLS parameters to model anisotropic displacements in macromolecular refinement. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 57, No. Pt 1. (January 2001), pp. 122-133. by M. D. Winn, M. N. Isupov, G. N. Murshudov posted to 1paper acra crystallography programs structure by martainn on 2007-06-20 16:01:08 as
	Function of the membrane fusion protein, MexA, of the MexA, B-OprM efflux pump in Pseudomonas aeruginosa without an anchoring membrane. [My Copy] J Biol Chem, Vol. 275, No. 7. (18 February 2000), pp. 4628-4634. by H. Yoneyama, H. Maseda, H. Kamiguchi, T. Nakae posted to 1paper 3review acra lipoyl mexa structure by martainn on 2007-05-23 16:41:51 as
	pH-induced conformational changes of AcrA, the membrane fusion protein of Escherichia coli multidrug efflux system. [My Copy] J Biol Chem, Vol. 278, No. 50. (12 December 2003), pp. 50474-50482. by H. Ip, K. Stratton, H. Zgurskaya, J. Liu posted to 1paper 3review acra adapter structure by martainn on 2007-04-18 14:41:25 as
	AcrA, AcrB, and TolC of Escherichia coli Form a Stable Intermembrane Multidrug Efflux Complex. [My Copy] J Biol Chem, Vol. 279, No. 31. (30 July 2004), pp. 32116-32124. by E. B. Tikhonova, H. I. Zgurskaya posted to 1paper acra acrb drug-efflux tolc by martainn on 2007-04-12 18:28:12 as
	Conformational flexibility in the multidrug efflux system protein AcrA. [My Copy] Structure, Vol. 14, No. 3. (March 2006), pp. 577-587. by J. Mikolosko, K. Bobyk, H. I. Zgurskaya, P. Ghosh posted to 1paper 3review acra adapter structure by martainn on 2007-04-12 18:21:47 as
	Three's company: component structures bring a closer view of tripartite drug efflux pumps. [My Copy] Curr Opin Struct Biol, Vol. 14, No. 6. (December 2004), pp. 741-747. by J. Eswaran, E. Koronakis, M. K. Higgins, C. Hughes, V. Koronakis posted to 1paper 3review 4grant drug-efflux structure by martainn on 2007-04-12 18:18:22 as
	Crystal structures of a multidrug transporter reveal a functionally rotating mechanism [My Copy] Nature (16 August 2006) by Satoshi Murakami, Ryosuke Nakashima, Eiki Yamashita, Takashi Matsumoto, Akihito Yamaguchi posted to 1paper 3review acra acrb asymmetry structure by martainn on 2007-04-12 18:16:39 as
	Structural asymmetry of AcrB trimer suggests a peristaltic pump mechanism. [My Copy] Science, Vol. 313, No. 5791. (1 September 2006), pp. 1295-1298. by M. A. Seeger, A. Schiefner, T. Eicher, F. Verrey, K. Diederichs, K. M. Pos posted to 1paper 3review acra acrb asymmetry drug-efflux structure by martainn on 2007-04-12 18:16:16 as
	Direct interaction of multidrug efflux transporter AcrB and outer membrane channel TolC detected via site-directed disulfide cross-linking. [My Copy] Biochemistry, Vol. 44, No. 33. (23 August 2005), pp. 11115-11121. by N. Tamura, S. Murakami, Y. Oyama, M. Ishiguro, A. Yamaguchi posted to 1paper 3review acrb crosslinking structure tolc by martainn on 2007-04-12 18:15:05 as
	Drug Export Pathway of Multidrug Exporter AcrB Revealed by DARPin Inhibitors. [My Copy] PLoS Biol, Vol. 5, No. 1. (26 December 2006) by Gaby Sennhauser, Patrick Amstutz, Christophe Briand, Otso Storchenegger, Markus G G. Grütter posted to 1paper 3review acrb asymmetry drug-efflux inhibitor structure by martainn on 2007-04-12 18:14:26 as along with 1 person cpiscitelli
	Crystal structure of the membrane fusion protein, MexA, of the multidrug transporter in Pseudomonas aeruginosa. [My Copy] J Biol Chem, Vol. 279, No. 25. (18 June 2004), pp. 25939-25942. by H. Akama, T. Matsuura, S. Kashiwagi, et al.H. Yoneyama, S. Narita, T. Tsukihara, A. Nakagawa, T. Nakae posted to 1paper 3review drug-efflux mexa structure by martainn on 2007-04-12 17:26:05 as
	Structural basis of multiple drug-binding capacity of the AcrB multidrug efflux pump. [My Copy] Science, Vol. 300, No. 5621. (9 May 2003), pp. 976-980. by E. W. Yu, G. McDermott, H. I. Zgurskaya, H. Nikaido, D. E. Koshland posted to 1paper acrb drug-efflux structure by martainn on 2007-04-12 17:19:02 as
	Substrate-induced assembly of a contiguous channel for protein export from E.coli: reversible bridging of an inner-membrane translocase to an outer membrane exit pore. [My Copy] EMBO J, Vol. 17, No. 22. (16 November 1998), pp. 6487-6496. by T. Thanabalu, E. Koronakis, C. Hughes, V. Koronakis posted to 1paper 3review 4grant hemolysin tolc type-i by martainn on 2007-04-12 17:17:53 as along with 1 person cam-flagella
	Crystal structure of bacterial multidrug efflux transporter AcrB. [My Copy] Nature, Vol. 419, No. 6907. (10 October 2002), pp. 587-593. by S. Murakami, R. Nakashima, E. Yamashita, A. Yamaguchi posted to 1paper 3review acrb drug-efflux structure by martainn on 2007-04-12 17:13:28 as along with 3 people girayenkavi happy_manatee viktor21614
	Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export. [My Copy] Nature, Vol. 405, No. 6789. (22 June 2000), pp. 914-919. by V. Koronakis, A. Sharff, E. Koronakis, B. Luisi, C. Hughes posted to 1paper 3review 4grant drug-efflux structure tolc type-i by martainn on 2007-04-12 17:11:30 as along with 2 people EvaKaltenborn cam-flagella
	Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps. [My Copy] J Mol Biol, Vol. 287, No. 3. (2 April 1999), pp. 695-715. by J. M. Johnson, G. M. Church posted to 1paper 3review acra adapter lipoyl mexa by martainn on 2007-04-12 16:41:22 as along with 1 person and 3 groups beapen Atopic_and_Seborrhoeic_Dermatitis Skin_Deep Applied_Bimatics
	Locking TolC entrance helices to prevent protein translocation by the bacterial type I export apparatus. [My Copy] J Mol Biol, Vol. 327, No. 2. (21 March 2003), pp. 309-315. by J. Eswaran, C. Hughes, V. Koronakis posted to 1paper 3review 4grant drug-efflux structure tolc type-i by martainn on 2007-04-12 16:39:18 as
	Chimeric analysis of AcrA function reveals the importance of its C-terminal domain in its interaction with the AcrB multidrug efflux pump. [My Copy] J Bacteriol, Vol. 185, No. 18. (September 2003), pp. 5349-5356. by C. A. Elkins, H. Nikaido posted to 1paper 2discussion 3review acra drug-efflux by martainn on 2007-04-12 16:38:23 as
	Transition to the open state of the TolC periplasmic tunnel entrance. [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 17. (20 August 2002), pp. 11103-11108. by C. Andersen, E. Koronakis, E. Bokma, et al.J. Eswaran, D. Humphreys, C. Hughes, V. Koronakis posted to 1paper 3review 4grant drug-efflux tolc by martainn on 2007-04-12 16:33:19 as along with 1 person cam-flagella
	Interactions underlying assembly of the Escherichia coli AcrAB-TolC multidrug efflux system. [My Copy] Mol Microbiol, Vol. 53, No. 2. (July 2004), pp. 697-706. by T. Touzé, J. Eswaran, E. Bokma, E. Koronakis, C. Hughes, V. Koronakis posted to 1paper 3review 4grant acra drug-efflux by martainn on 2007-03-24 18:32:53 as
	Flexibility in a drug transport accessory protein: molecular dynamics simulations of MexA. [My Copy] Biophys J, Vol. 91, No. 2. (15 July 2006), pp. 558-564. by L. Vaccaro, V. Koronakis, M. S. Sansom posted to 1paper 3review 4grant acra drug-efflux by martainn on 2007-03-24 18:29:05 as
	A periplasmic coiled-coil interface underlying TolC recruitment and the assembly of bacterial drug efflux pumps. [My Copy] Proc Natl Acad Sci U S A, Vol. 104, No. 11. (13 March 2007), pp. 4612-4617. by S. Lobedanz, E. Bokma, M. F. Symmons, E. Koronakis, C. Hughes, V. Koronakis posted to 1paper 3review 4grant acra docking drug-efflux by martainn on 2007-03-24 18:25:52 as

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structure	237
virulence	151
fold-evolution	109
drug-efflux	101
tolc	74
3review	70
evolution	66
phage	63
acra	56
1paper	49
type-iii	46
assembly	45
type-i	45
crystallography	41
acrb	40
4grant	33
mutation	32
atpase	31
programs	31
hemolysin	30
inhibitor	29
pilus	29
adapter	28
comparative_genomics	27
vibrio	27
flagella	26
pseudomonas	25
mexa	24
export	24
toxin	24
duplication	23
expression	21
srna	21
coiled-coils	20
ctx	20
beta-sheets	19
secretion	19
hlyd	17
fluorescence	17
small-motifs	16
4preview	16
docking	16
fusion	15
hlyb	15
crystallization	15
carriers	15
software	14
periplasmic	14
alignment	14
theory	13
mitochondrial	13
yersinia	13
colicin	12
salmonella	12
strategy	12
type-iv	11
abc_transporter	11
1barrel	11
beta-barrel	11
fret	10
crosslinking	10
rna	10
colicinv	10
competence	10
dynamics	9
effector	9
membrane_proteins	9
2discussion	8
methods	8
quorum	8
gram-positive	8
heterogeneity	7
type-ii	7
detergents	7
virus	7
superfolds	7
indels	7
mfs	6
shigella	6
heat-stable-enterotoxinii	6
pro-isomerization	6
type_i	6
truncation	6
kinetics	6
hfq	5
outer_membrane	5
channels	5
asymmetry	5
dhfr	5
pseudopilus	5
esat-6	5
plasmid	4
clostridium	4
pnpase	4
import	4
cvaa	4
mtx	4
trp	4
secretin	4
tolq	4
normalmodes	4
history	4
sipb	4
c-di-gmp	3
beta-bulge	3
apoptosis	3
rnd	3
vaccine	3
emre	3
electrophysiology	3
energy_landscape	3
smr	3
c_difficile	3
adp-atp	3
oprm	3
lactis	3
conjugation	3
non-biological	3
crick	3
rna_binding	3
microcin	3
atp-binding	3
polar	3
semet	3
2paper	3
chaperone	3
lipoyl	3
mitochondria	2
mexb	2
dispersin	2
dna	2
polysaccharide	2
puld	2
building	2
enolase	2
flhb	2
sv5	2
h_influenzae	2
nmr	2
equatorial	2
pilz	2
single-molecule	2
quenching	2
mitochondrial_disorders	2
rhodopsin_family	2
neisseria	2
peptidoglycan	2
citrate	2
virg	2
cryo	1
phasing	1
cusb	1
insulin_secretion	1
staphylococcus	1
em	1
human	1
prgk	1
medawar	1
binding_mechanisms	1
7-transmembrane	1
macab	1
exosome	1
serratia	1
cys	1
flhf	1
chloride	1
f1fo	1
ros	1
nesseria	1
cusf	1
cycling	1
epr	1
traffic	1
phage_shock	1
fission	1
ethics	1
darpins	1
proteasome	1

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