maryee's microarray [27 articles] Export

Recent papers added to maryee's library classified by the tag microarray. You can also see everyone's microarray.

	Assessing reliability of gene clusters from gene expression data. [My Copy] Funct Integr Genomics, Vol. 1, No. 3. (November 2000), pp. 156-173. by K. Zhang, H. Zhao posted to microarray treetest by maryee on 2006-12-05 22:53:27 as
	Pvclust: an R package for assessing the uncertainty in hierarchical clustering [My Copy] Bioinformatics, Vol. 22, No. 12. (15 June 2006), pp. 1540-1542. by Ryota Suzuki, Hidetoshi Shimodaira posted to microarray treetest by maryee on 2006-09-08 18:12:05 as along with 10 people walshtp ltitodem druvus jfr wnpx josepe ghattem elfar quianominorleo briordan
	A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules [My Copy] Science, Vol. 302, No. 5643. (10 October 2003), pp. 249-255. by Joshua M. Stuart, Eran Segal, Daphne Koller, Stuart K. Kim posted to microarray treetest by maryee on 2006-09-08 16:45:30 as along with 24 people and 7 groups sficklin roys thegoose2 cswinburne carlk saket pengchy nolodie jeremymiller tharris dragonrez textoris lfriedl balajis nuke2005 tardigrade opheliav wnpx neveaire macle raylim lp2 karfunkel vertikalist C. elegans / WormBase kdl Biostatistics Computational-Genomics Bioinformatics Neuroscience BTS-PT-AS-CS
	Coexpression Analysis of Human Genes Across Many Microarray Data Sets [My Copy] Genome Research, Vol. 14, No. 6. (June 2004), pp. 1085-1094. by Homin K. Lee, Amy K. Hsu, Jon Sajdak, Jie Qin, Paul Pavlidis posted to microarray treetest by maryee on 2006-09-08 16:43:50 as along with 17 people and 2 groups sficklin cabbagezs cswinburne pengchy jiny gpalidwor giovanni jeremymiller hawkeyehammer grahamc macavity1g raylim sgoetz wilbur jo_davies nedwards dragonrez GeschwindLab Indigene
	A systematic statistical linear modeling approach to oligonucleotide array experiments [My Copy] Mathematical Biosciences, Vol. 176, No. 1. (March 2002), pp. 35-51. by Tzu-Ming Chu, Bruce Weir, Russ Wolfinger posted to microarray treetest by maryee on 2006-09-08 01:10:21 as along with 1 person bertelsen
	Assessing Gene Significance from cDNA Microarray Expression Data via Mixed Models [My Copy] J Comput Biol., Vol. 8, No. 6. (2001), pp. 625-637. by Wolfinger posted to microarray treetest by maryee on 2006-09-08 01:08:27 as
	Application of a priori established gene sets to discover biologically important differential expression in microarray data [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15278-15279. by Andrea Bild, Phillip G. Febbo posted to microarray treetest by maryee on 2006-08-22 06:09:26 as along with 5 people and 1 group bertelsen antonkratz ealloza jdiggans srp33 BioinfoCIPF
	Linear models and empirical bayes methods for assessing differential expression in microarray experiments. [My Copy] Statistical applications in genetics and molecular biology, Vol. 3, No. 1. (2004) by Gordon K. Smyth posted to microarray by maryee on 2006-07-17 00:56:34 as along with 19 people and 1 group schwalb shikin bertelsen jperkins zoex_99 ipark-kaist lwaldron paszkows isimpson Stew ihpark giovenko RMGraze mayercd justescaped ugengma heliopais guhjy talponer Bioinformatics - CRUK
	Use of within-array replicate spots for assessing differential expression in microarray experiments. [My Copy] Bioinformatics (18 January 2005) by Gordon K K. Smyth, Joëlle Michaud, Hamish S S. Scott posted to microarray by maryee on 2006-07-17 00:54:55 as along with 2 people mdimmic Dax42
	Correspondence analysis of microarray time-course data in case-control design. [My Copy] J Biomed Inform, Vol. 37, No. 5. (October 2004), pp. 358-365. by Q. Tan, K. Brusgaard, T. A. Kruse, et al.E. Oakeley, B. Hemmings, H. Beck-Nielsen, L. Hansen, M. Gaster posted to microarray tb by maryee on 2006-07-14 00:17:41 as
	A new closed multiple testing procedure for hierarchical families of hypotheses [My Copy] Journal of Statistical Planning and Inference, Vol. 46, No. 3. (15 August 1995), pp. 265-275. by Dror M. Rom, Burt Holland posted to microarray by maryee on 2006-06-15 01:40:04 as
	The Control of the False Discovery Rate in Multiple Testing under Dependency [My Copy] Annals of Statistics (2001) by Y. Benjamini, D. Yekutieli posted to microarray by maryee on 2006-06-15 01:27:15 as
	Identifying differentially expressed genes using false discovery rate controlling procedures. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 3. (12 February 2003), pp. 368-375. by Anat Reiner, Daniel Yekutieli, Yoav Benjamini posted to microarray by maryee on 2006-06-15 01:25:35 as along with 8 people ericrpaquet olberd zufar bertelsen maximilianh RMGraze talponer shikin
	Microarray analysis and tumor classification. [My Copy] N Engl J Med, Vol. 354, No. 23. (8 June 2006), pp. 2463-2472. by J. Quackenbush posted to microarray by maryee on 2006-06-14 15:22:26 as along with 3 people and 1 group capitall jeremymiller frohike GeschwindLab
	Clustering microarray gene expression data using weighted Chinese restaurant process. [My Copy] Bioinformatics (9 June 2006) by Zhaohui Qin posted to microarray by maryee on 2006-06-14 15:21:23 as along with 3 people jfr archroad bayes
	Visualization methods for statistical analysis of microarray clusters. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by M. A. Hibbs, N. C. Dirksen, K. Li, O. G. Troyanskaya posted to microarray by maryee on 2006-06-14 15:19:49 as along with 5 people guhjy jfr smbaxtersf waszak ndiaz
	Towards precise classification of cancers based on robust gene functional expression profiles [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005) by Zheng Guo, Tianwen Zhang, Xia Li, et al.Qi Wang, Jianzhen Xu, Hui Yu, Jing Zhu, Haiyun Wang, Chenguang Wang, Eric Topol, Qing Wang, Shaoqi Rao posted to microarray by maryee on 2006-06-14 15:11:37 as along with 3 people jfr eckart_bindewald macavity1g
	Cluster analysis and display of genome-wide expression patterns [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 25. (8 December 1998), pp. 14863-14868. by Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein posted to microarray by maryee on 2006-06-07 04:48:26 as along with 34 people and 3 groups antonkratz potatongy drungows colmryan jplatig rsaito Neeperando baldigroup daforerog karinlag ronglais operon Borelli pengchy macowell ggrot miguel textoris okarsligil pcahan1 lfriedl balajis nuke2005 lyongu wnpx nirfriedman dquest karfunkel dps kintoki jo_davies tvdbulck bozdagd roys kdl Bioinformatics BUiGEM
	PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. [My Copy] Nature genetics, Vol. 34, No. 3. (July 2003), pp. 267-273. by Vamsi K. Mootha, Cecilia M. Lindgren, Karl-Fredrik F. Eriksson, et al.Aravind Subramanian, Smita Sihag, Joseph Lehar, Pere Puigserver, Emma Carlsson, Martin Ridderstråle, Esa Laurila, Nicholas Houstis, Mark J. Daly, Nick Patterson, Jill P. Mesirov, Todd R. Golub, Pablo Tamayo, Bruce Spiegelman, Eric S. Lander, Joel N. Hirschhorn, David Altshuler, Leif C. Groop posted to microarray by maryee on 2006-06-04 01:12:10 as along with 10 people and 2 groups jperkins yaredo ipark-kaist paszkows dragonrez ealloza giovanni shikin magusina heliopais BioinfoCIPF GeschwindLab
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to microarray by maryee on 2006-06-04 01:09:12 as along with 45 people and 4 groups gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
	Using the Gene Ontology for Microarray Data Mining: A Comparison of Methods and Application to Age Effects in Human Prefrontal Cortex [My Copy] Neurochemical Research, Vol. 29, No. 6. (June 2004) by Paul posted to microarray by maryee on 2006-06-04 01:07:25 as
	A network-based analysis of systemic inflammation in humans [My Copy] Nature, Vol. 437, No. 7061. (13 October 2005), pp. 1032-1037. by Steve E. Calvano, Wenzhong Xiao, Daniel R. Richards, et al.Ramon M. Felciano, Henry V. Baker, Raymond J. Cho, Richard O. Chen, Bernard H. Brownstein, J. Perren Cobb, S. Kevin Tschoeke, Carol Miller-Graziano, Lyle L. Moldawer, Michael N. Mindrinos, Ronald W. Davis, Ronald G. Tompkins, Stephen F. Lowry, Large Scale Collab posted to microarray by maryee on 2006-06-04 00:58:34 as along with 13 people and 1 group yaredo textoris tuck VCKALIA nknii juliajumeau lhonigberg noano grahamc massivemayhem karfunkel beapen guhjy TCR_Signaling
	An integrative genomics approach to the reconstruction of gene networks in segregating populations. [My Copy] Cytogenetic and genome research, Vol. 105, No. 2-4. (2004), pp. 363-374. by J. Zhu, P. Y. Lum, J. Lamb, et al.D. GuhaThakurta, S. W. Edwards, R. Thieringer, J. P. Berger, M. S. Wu, J. Thompson, A. B. Sachs, E. E. Schadt posted to microarray by maryee on 2006-06-04 00:57:51 as along with 4 people biomcgary brant balicea jo_davies
	Oncogenic pathway signatures in human cancers as a guide to targeted therapies. [My Copy] Nature, Vol. 439, No. 7074. (19 January 2006), pp. 353-357. by Andrea H. Bild, Guang Yao, Jeffrey T. Chang, et al.Quanli Wang, Anil Potti, Dawn Chasse, Mary-Beth B. Joshi, David Harpole, Johnathan M. Lancaster, Andrew Berchuck, John A. Olson, Jeffrey R. Marks, Holly K. Dressman, Mike West, Joseph R. Nevins posted to microarray by maryee on 2006-06-04 00:56:25 as along with 15 people bertelsen roys ipark-kaist zufar Yanno guhjy kentsis mfenner ajeffs tuck eckart_bindewald frohike Ao_Li2007 waghsk srp33
	Quantifying the relationship between co-expression, co-regulation and gene function. [My Copy] BMC Bioinformatics, Vol. 5 (25 February 2004) by D. J. Allocco, I. S. Kohane, A. J. Butte posted to microarray by maryee on 2006-06-04 00:54:42 as along with 2 people kittipat gpalidwor
	Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by C. J. Wolfe, I. S. Kohane, A. J. Butte posted to microarray by maryee on 2006-06-04 00:54:05 as along with 3 people balajis srp33 dragonrez
	Discovering statistically significant pathways in expression profiling studies. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 38. (20 September 2005), pp. 13544-13549. by Lu Tian, Steven A. Greenberg, Sek Won W. Kong, Josiah Altschuler, Isaac S. Kohane, Peter J. Park posted to microarray by maryee on 2006-06-04 00:53:18 as along with 12 people and 1 group zufar yaredo VGreiff daforerog ipark-kaist dragonrez ealloza frohike justescaped srp33 giovenko heliopais BioinfoCIPF