matthewsuderman's library 13 articles Export

	Identification of genetic variants using bar-coded multiplexed sequencing [My Copy] Nature Methods, Vol. 5, No. 10. (14 September 2008), pp. 887-893. by David W. Craig, John V. Pearson, Szabolcs Szelinger, et al.Aswin Sekar, Margot Redman, Jason J. Corneveaux, Traci L. Pawlowski, Trisha Laub, Gary Nunn, Dietrich A. Stephan, Nils Homer, Matthew J. Huentelman posted to sequencing snp by matthewsuderman on 2008-09-30 19:44:36 as along with 12 people vplagnol heliopais sandfire vmsr maren brdwilde guhjy jbhiatt pdexheimer slevy03 caseybrown pwais
	Mapping short DNA sequencing reads and calling variants using mapping quality scores. [My Copy] Genome research, Vol. 18, No. 11. (19 November 2008), pp. 1851-1858. by Heng Li, Jue Ruan, Richard Durbin posted to end pair sequencing snp by matthewsuderman on 2008-09-30 19:35:34 as along with 38 people and 2 groups seninp heliopais hzoltan cthachuk darshan adijr darian bozdagd jmanning2k stubrown APRegier ghattem jbhiatt mmartin michaelbarton polivares jonilaserson humburg n00c jessopher maren GeeSharpMinor vmsr vplagnol natstreet poschm jfr druvus dandaman xingxu rschulz jmcq inesdesantiago Neeperando nmohelli bpb gdb farhat SIMR bioinformatics BergmanLab
	Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution. [My Copy] Genome research, Vol. 17, No. 9. (September 2007), pp. 1296-1303. by G. R. Bignell, T. Santarius, J. C. Pole, et al.A. P. Butler, J. Perry, E. Pleasance, C. Greenman, A. Menzies, S. Taylor, S. Edkins, P. Campbell, M. Quail, B. Plumb, L. Matthews, K. McLay, P. A. Edwards, J. Rogers, R. Wooster, P. A. Futreal, M. R. Stratton posted to structure variation by matthewsuderman on 2008-09-30 17:45:02 as
	A robust framework for detecting structural variations in a genome [My Copy] Bioinformatics In Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i59-67. by Seunghak Lee, Elango Cheran, Michael Brudno posted to structure variation by matthewsuderman on 2008-09-30 16:45:51 as along with 11 people n00c matted darian dakelley jonilaserson rdiaz balicea Neeperando kittipat raistrick APRegier
	A sequence-based survey of the complex structural organization of tumor genomes [My Copy] Genome Biology, Vol. 9, No. 3. (25 March 2008), R59. by Benjamin Raphael, Stanislav Volik, Peng Yu, et al.Chunxiao Wu, Guiqing Huang, Elena Linardopoulou, Barbara Trask, Frederic Waldman, Joseph Costello, Kenneth Pienta, Gordon Mills, Krystyna Bajsarowicz, Yasuko Kobayashi, Shivaranjani Sridharan, Pamela Paris, Quanzhou Tao, Sarah Aerni, Raymond Brown, Ali Bashir, Joe Gray, Jan F. Cheng, Pieter de Jong, Mikhail Nefedov, Thomas Ried, Hesed P. Nash, Colin Collins posted to structure variation by matthewsuderman on 2008-09-30 16:45:35 as along with 3 people dakelley jfr Schmidtc
	Decoding the fine-scale structure of a breast cancer genome and transcriptome [My Copy] Genome Research, Vol. 16, No. 3. (1 March 2006), pp. 394-404. by Stanislav Volik, Benjamin J. Raphael, Guiqing Huang, et al.Michael R. Stratton, Graham Bignel, John Murnane, John H. Brebner, Krystyna Bajsarowicz, Pamela L. Paris, Quanzhou Tao, David Kowbel, Anna Lapuk, Dmitri A. Shagin, Irina A. Shagina, Joe W. Gray, Jan-Fang Cheng, Pieter J. de Jong, Pavel Pevzner, Colin Collins posted to structure variation by matthewsuderman on 2008-09-30 16:45:18 as along with 4 people dakelley jfr tuck emb51
	Evaluation of Paired-End Sequencing Strategies for Detection of Genome Rearrangements in Cancer [My Copy] PLoS Comput Biol, Vol. 4, No. 4. (25 April 2008), e1000051. by Ali Bashir, Stanislav Volik, Colin Collins, Vineet Bafna, Benjamin J. Raphael posted to structure variation by matthewsuderman on 2008-09-30 16:44:46 as along with 5 people dakelley jessopher APRegier iris42 vega
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, N. Alice Yamada, Peter Tsang, Tera L. Newman, Eray Tuzun, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin McKernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. McCarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted to structure variation by matthewsuderman on 2008-09-30 16:44:23 as along with 35 people and 2 groups hzoltan n00c daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak jfr hpaces Ema bpb dchughes djkt balicea shikin psique kintoki kaniko aprasad vplagnol maximilianh chrisamiller guhjy skoch3 GeneGo Koch_Lab
	Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome [My Copy] Science In Science, Vol. 318, No. 5849. (19 October 2007), pp. 420-426. by Jan O. Korbel, Alexander E. Urban, Jason P. Affourtit, et al.Brian Godwin, Fabian Grubert, Jan F. Simons, Philip M. Kim, Dean Palejev, Nicholas J. Carriero, Lei Du, Bruce E. Taillon, Zhoutao Chen, Andrea Tanzer, A. C. Eugenia Saunders, Jianxiang Chi, Fengtang Yang, Nigel P. Carter, Matthew E. Hurles, Sherman M. Weissman, Timothy T. Harkins, Mark B. Gerstein, Michael Egholm, Michael Snyder posted to structure variation by matthewsuderman on 2008-09-30 16:44:15 as along with 22 people and 2 groups torfinnnome jandot n00c jonilaserson jrvalcourt APRegier jessopher hpaces Zephyrus pkonings orzenil stuetz dpollard dchughes AaronDarling rdiaz giovanni jlangdon annacarina07 Neeperando jfr caseybrown Journal picks EisenLab
	Fine-scale structural variation of the human genome [My Copy] Nature Genetics, Vol. 37, No. 7. (15 May 2005), pp. 727-732. by Eray Tuzun, Andrew J. Sharp, Jeffrey A. Bailey, et al.Rajinder Kaul, Anne V. Morrison, Lisa M. Pertz, Eric Haugen, Hillary Hayden, Donna Albertson, Daniel Pinkel, Maynard V. Olson, Evan E. Eichler posted to structure variation by matthewsuderman on 2008-09-30 16:43:52 as along with 5 people APRegier waszak bpb pcahan1 Neeperando
	Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing [My Copy] Nature Genetics In Nat Genet, Vol. 40, No. 6. (27 April 2008), pp. 722-729. by Peter J. Campbell, Philip J. Stephens, Erin D. Pleasance, et al.Sarah O'Meara, Heng Li, Thomas Santarius, Lucy A. Stebbings, Catherine Leroy, Sarah Edkins, Claire Hardy, Jon W. Teague, Andrew Menzies, Ian Goodhead, Daniel J. Turner, Christopher M. Clee, Michael A. Quail, Antony Cox, Clive Brown, Richard Durbin, Matthew E. Hurles, Paul A. W. Edwards, Graham R. Bignell, Michael R. Stratton, P. Andrew Futreal posted to structure variation by matthewsuderman on 2008-09-30 16:43:29 as along with 13 people n00c chvlyl dakelley APRegier myzhang jessopher frohike smiddha xingxu daed jfr caseybrown chrisamiller
	Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients. [My Copy] Genomics, Vol. 91, No. 6. (June 2008), pp. 530-537. by H. S. Hayden, W. Gillett, C. Saenphimmachak, et al.R. Lim, Y. Zhou, M. A. Jacobs, J. Chang, L. Rohmer, D. A. D'Argenio, A. Palmieri, R. Levy, E. Haugen, G. K. Wong, M. J. Brittnacher, J. L. Burns, S. I. Miller, M. V. Olson, R. Kaul posted to structure variation by matthewsuderman on 2008-09-30 16:40:53 as
	Whole-genome sequencing and variant discovery in C. elegans. [My Copy] Nature methods, Vol. 5, No. 2. (20 February 2008), pp. 183-188. by LaDeana W. Hillier, Gabor T. Marth, Aaron R. Quinlan, et al.David Dooling, Ginger Fewell, Derek Barnett, Paul Fox, Jarret I. Glasscock, Matthew Hickenbotham, Weichun Huang, Vincent J. Magrini, Ryan J. Richt, Sacha N. Sander, Donald A. Stewart, Michael Stromberg, Eric F. Tsung, Todd Wylie, Tim Schedl, Richard K. Wilson, Elaine R. Mardis posted to structure variation by matthewsuderman on 2008-09-30 16:38:27 as along with 14 people seninp Annab n00c APRegier thegoose2 druvus semrich AaronDarling usagi-kirin inesdesantiago orzenil mdimon farhat tharris

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