maximilianh's Iyer:VN [4 articles] Export

Recent papers posted to maximilianh's library by the author Iyer:VN. You can also see everyone's Iyer:VN.

	Big Genomes Facilitate the Comparative Identification of Regulatory Elements [My Copy] PLoS ONE, Vol. 4, No. 3. (4 March 2009), e4688. by Brant K. Peterson, Emily E. Hare, Venky N. Iyer, et al.Steven Storage, Laura Conner, Daniel R. Papaj, Rick Kurashima, Eric Jang, Michael B. Eisen posted to cns-differences conservation cross-species-enhancer inter-cns-distances by maximilianh on 2009-03-10 13:55:36 as along with 8 people and 2 groups natstreet lusk dpollard JustinCrocker daveGerrard emmahe trfield idoerg RockmanLab BergmanLab
	Sepsid even-skipped Enhancers Are Functionally Conserved in Drosophila Despite Lack of Sequence Conservation [My Copy] PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000106. by Emily E. Hare, Brant K. Peterson, Venky N. Iyer, Rudolf Meier, Michael B. Eisen posted to cns-differences cns-similarity combination composition cross-species-enhancer drosophila noalignment notconserved by maximilianh on 2008-09-05 10:47:36 as along with 8 people and 2 groups lusk Stew emptyhb djkt stajich pradiptaray cisevol caseybrown Mycology cis-regulatory-evolution
	Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm. [My Copy] PLoS biology, Vol. 6, No. 2. (12 February 2008), e27. by X. Y. Li, S. MacArthur, R. Bourgon, et al.D. Nix, D. A. Pollard, V. N. Iyer, A. Hechmer, L. Simirenko, M. Stapleton, C. L. Luengo Hendriks, H. C. Chu, N. Ogawa, W. Inwood, V. Sementchenko, A. Beaton, R. Weiszmann, S. E. Celniker, D. W. Knowles, T. Gingeras, T. P. Speed, M. B. Eisen, M. D. Biggin posted to chipchip coding notconserved by maximilianh on 2008-02-16 17:47:48 as along with 8 people and 1 group gdb daveGerrard kengg caseybrown emptyhb brant isimpson Stew BergmanLab
	Large-scale turnover of functional transcription factor binding sites in Drosophila. [My Copy] PLoS Comput Biol, Vol. 2, No. 10. (October 2006) by A. M. Moses, D. A. Pollard, D. A. Nix, et al.V. N. Iyer, X. Y. Li, M. D. Biggin, M. B. Eisen posted to cns-differences by maximilianh on 2007-11-08 17:48:58 as along with 6 people and 2 groups caseybrown adepace eukfn lusk cisevol emptyhb EisenLab cis-regulatory-evolution

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fromconnotea	411
motif	174
discovery	127
duplicates	59
scanning	57
synteny	56
enhancer	55
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	30
cross-species-enhancer	28
noalignment	28
wnt	26
review	23
ncrna	22
conserved	21
phylogenomics	21
chipchip	19
alignment	19
phylogeny	18
transcription	18
ultraconserved	17
promoter	17
notconserved	16
rennes	16
repeated	16
cis-trans	15
otx	15
genome	14
pcr	14
whole	14
insulator	12
cluster	12
enhancerpromotercompatibility	12
disease	11
tools	11
pwm	11
websites	11
mirna	10
ciona	10
pwmimprovement	10
randombreakage	10
cns-ranking	10
chromatin	10
cns-enhancer-screen	10
dna	9
cns-collaboration	9
pitx	8
cns-similarity	8
promoters	8
genome-papers	8
3dstructure	8
genes	7
pwmcomparison	7
genomicregulatoryblocks	7
conservation	7
syntenytools	7
genomeregulatoryblocks	7
application	7
long-range	6
enhancer-screen	6
orthology	6
snp	6
phenotype	6
position	6
enhanceosome	6
promoterprediction	6
enhancer-vertebrate-invertebrate	6
bidirectionalpromoters	6
redundancy	6
comparative	5
methylation	5
genecoregulation	5
enhancerdistances	5
similarity	5
textmining	5
chipseq	5
structure	5
validated	5
enhancer-and-repeats	5
microrna	5
expression	4
recognition	4
enhancersharing	4
region	4
comparison	4
introns	4
footprinting	4
wholegenomescanning	4
interchromosomal	4
otxpaper	4
enhancer-prediction	4
antisensetranscription	4
competition	4
silencer	4
mutations	3
phylotypicstage	3
copy-number-variation	3
ncrnas	3
enhancerincodingregion	3
regulatory	3
go	3
regions	3
thermodynamicalmodels	3
coding	3
genometrees	3
matrix	3
model-species	3
mirnaenhancer	3
rna-binding	3
cionapopulationgenetics	3
interaction	3
term_recognition	3
promoter-minimal	3
tf	3
evoluation	3
inter-cns-distances	3
composition	3
factorclass	3
trainingset	3
syntenyorientation	3
myarticles	3
encode	3
polymorphism	2
whyconserved	2
ultraconserveddefinition	2
drosophila	2
pluripotency	2
3putr	2
ncrna-long	2
of	2
molecularbiologytools	2
cns-database	2
factorinteractions	2
cellsortingbasedanalysis	2
networks	2
tfsynergy	2
bullshitarticles	2
strengthofmatch	2
protocols	2
histones	2
ciona-gene-annotation	2
regulatory-flexibility	2
enhancer-stage-specificity	2
site-prediction	2
genomiccontext	2
assayscisregwetlab	2
replicationorigins	2
spacing	2
microarray	2
rearrangement	2
core	2
pvalue-multiplicity	2
ascidians	2
binding	2
prediction	2
jshypotheses	2
codingconservation	2
grn	2
pituitary	2
mammals	2
sites	1
coexpression	1
microarray-analysis	1
arx	1
purificationfromdna	1
syntenypapers	1
smarts	1
word	1
factorsclass	1
degeneratesites	1
cell-cultures	1
bioinformatics	1
transgenesis	1
positiveselection	1
cns-enhancer	1
element	1
drosphila	1
intra-primate	1
duplicatese	1
genefamilyfootprinting	1
generegulatorynetworks	1
grns	1
applicationbioinf	1
decoy	1
cns-enhance	1
autoregulation	1
phylogenytools	1
pax6	1
tr-reviews	1
impossible	1
turnover	1
cns-difference	1
hmm	1
notconservedfunction	1
gibbs	1
nomotif	1
doublets	1
books	1
dlx	1
olfactoryreceptors	1
fugu	1
fastindexing	1
writing	1
drosophia	1
insertionsdeletions	1
statistics	1
kernel	1
primers	1
igh	1
generalregulation	1
suppressor	1
genemodels	1
noaccess	1
cisregdatabase	1
ciona-gene-annotations	1
enhancer-contextanalysis	1
nucleosome	1