maximilianh's chromatin [10 articles] Export

Recent papers added to maximilianh's library classified by the tag chromatin. You can also see everyone's chromatin.

	Regulation of DNA demethylation during maturation of CD4+ naive T cells by the conserved noncoding sequence 1. [My Copy] Journal of immunology (Baltimore, Md. : 1950), Vol. 182, No. 12. (15 June 2009), pp. 7698-7707. by K. Aoki, N. Sato, A. Yamaguchi, O. Kaminuma, T. Hosozawa, S. Miyatake posted to chromatin methylation by maximilianh on 2009-06-06 23:13:16 as
	SAP18 promotes Krüppel-dependent transcriptional repression by enhancer-specific histone deacetylation. [My Copy] The Journal of biological chemistry, Vol. 284, No. 5. (30 January 2009), pp. 3012-3020. by A. Matyash, N. Singh, S. D. Hanes, H. Urlaub, H. Jäckle posted to chromatin histones by maximilianh on 2009-04-09 12:56:06 as along with 1 person gderwin
	Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription. [My Copy] Developmental cell, Vol. 16, No. 1. (20 January 2009), pp. 47-57. by Takanori Amano, Tomoko Sagai, Hideyuki Tanabe, Yoichi Mizushina, Hiromi Nakazawa, Toshihiko Shiroishi posted to chromatin by maximilianh on 2009-04-08 13:29:09 as along with 1 person carelcad
	The DNA-encoded nucleosome organization of a eukaryotic genome. [My Copy] Nature, Vol. 458, No. 7236. (19 March 2009), pp. 362-366. by Noam Kaplan, Irene K. Moore, Yvonne Fondufe-Mittendorf, et al.Andrea J. Gossett, Desiree Tillo, Yair Field, Emily M. LeProust, Timothy R. Hughes, Jason D. Lieb, Jonathan Widom, Eran Segal posted to chromatin by maximilianh on 2008-12-19 22:30:11 as along with 10 people and 1 group clearbluespring suizifish inesdesantiago gdb kshundyak absterga rschulz skoch3 WanderingAengus dchughes Koch_Lab
	Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding [My Copy] Genome Research, Vol. 18, No. 12. (3 December 2008), pp. 1906-1917. by A. Gordon Robertson, Mikhail Bilenky, Angela Tam, et al.Yongjun Zhao, Thomas Zeng, Nina Thiessen, Timothee Cezard, Anthony P. Fejes, Elizabeth D. Wederell, Rebecca Cullum, Ghia Euskirchen, Martin Krzywinski, Inanc Birol, Michael Snyder, Pamela A. Hoodless, Martin Hirst, Marco A. Marra, Steven J. M. Jones posted to chromatin by maximilianh on 2008-12-04 21:48:11 as along with 8 people tonamswish humburg gdb ewilban1 natstreet raylim jernst cpreviti
	High-throughput chromatin information enables accurate tissue-specific prediction of transcription factor binding sites. [My Copy] Nucleic acids research, Vol. 37, No. 1. (1 January 2009), pp. 14-25. by Tom Whitington, Andrew C. Perkins, Timothy L. Bailey posted to chromatin promoterprediction scanning site-prediction by maximilianh on 2008-11-12 10:43:25 as along with 7 people vingron akundaje inesdesantiago polivares lptolik WanderingAengus xili03
	High-resolution human core-promoter prediction with CoreBoost_HM. [My Copy] Genome research, Vol. 19, No. 2. (7 February 2009), pp. 266-275. by Xiaowo Wang, Zhenyu Xuan, Xiaoyue Zhao, Yanda Li, Michael Q. Zhang posted to chromatin promoterprediction by maximilianh on 2008-11-12 10:18:40 as along with 6 people and 1 group guhjy megraw tonamswish rpatward pengchy abizar microRNA
	A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning [My Copy] Genome Research, Vol. 18, No. 7. (13 July 2008), pp. 1051-1063. by Anton Valouev, Jeffrey Ichikawa, Thaisan Tonthat, et al.Jeremy Stuart, Swati Ranade, Heather Peckham, Kathy Zeng, Joel A. Malek, Gina Costa, Kevin Mckernan, Arend Sidow, Andrew Fire, Steven M. Johnson posted to chromatin motif nomotif nucleosome by maximilianh on 2008-05-16 12:23:42 as along with 8 people and 2 groups hagechouchin443 thegoose2 tharris caseybrown vega dpollard Stew aalibes C. elegans / WormBase RockmanLab
	Global Chromatin Domain Organization of the Drosophila Genome [My Copy] PLoS Genet, Vol. 4, No. 3. (28 March 2008), e1000045. by Elzo de Wit, Ulrich Braunschweig, Frauke Greil, Harmen J. Bussemaker, Bas van Steensel posted to 3dstructure chromatin dna by maximilianh on 2008-05-07 15:55:50 as along with 4 people caseybrown emptyhb Garamonfok oelemento
	Determinants of a transcriptionally competent environment at the GM-CSF promoter [My Copy] Nucl. Acids Res., Vol. 36, No. 8. (1 May 2008), pp. 2639-2653. by K. H. Brettingham-Moore, O. R. Sprod, X. Chen, P. Oakford, M. F. Shannon, A. F. Holloway posted to 3dstructure chromatin histones promoter by maximilianh on 2008-05-06 15:25:04 as

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fromconnotea	411
motif	178
discovery	130
duplicates	59
scanning	57
enhancer	56
synteny	56
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
cns	32
factors	32
geneorder	30
noalignment	28
cross-species-enhancer	28
wnt	26
review	24
ncrna	22
conserved	22
phylogenomics	21
phylogeny	20
chipchip	19
alignment	19
transcription	18
ultraconserved	17
promoter	17
repeated	16
rennes	16
notconserved	16
otx	15
cis-trans	15
pcr	14
whole	14
genome	14
enhancerpromotercompatibility	13
cluster	12
insulator	12
tools	12
pwm	11
disease	11
websites	11
randombreakage	10
pwmimprovement	10
cns-enhancer-screen	10
mirna	10
ciona	10
chromatin	10
cns-ranking	10
cns-collaboration	9
dna	9
promoters	8
pitx	8
genomicregulatoryblocks	8
genome-papers	8
3dstructure	8
cns-similarity	8
snp	7
pwmcomparison	7
application	7
conservation	7
genes	7
syntenytools	7
promoterprediction	7
genomeregulatoryblocks	7
position	6
long-range	6
enhanceosome	6
orthology	6
phenotype	6
textmining	6
enhancer-vertebrate-invertebrate	6
bidirectionalpromoters	6
redundancy	6
enhancer-screen	6
structure	5
similarity	5
expression	5
microrna	5
comparative	5
chipseq	5
validated	5
enhancerdistances	5
methylation	5
genecoregulation	5
enhancer-and-repeats	5
footprinting	4
enhancer-prediction	4
recognition	4
interaction	4
wholegenomescanning	4
enhancersharing	4
enhancerincodingregion	4
interchromosomal	4
otxpaper	4
silencer	4
antisensetranscription	4
energy_model	4
region	4
competition	4
comparison	4
introns	4
go	3
term_recognition	3
genometrees	3
copy-number-variation	3
encode	3
trainingset	3
tf	3
evoluation	3
inter-cns-distances	3
factorclass	3
composition	3
model-species	3
syntenyorientation	3
matrix	3
coding	3
myarticles	3
regions	3
mutations	3
phylotypicstage	3
mirnaenhancer	3
regulatory	3
cionapopulationgenetics	3
replicationorigins	3
rna-binding	3
ncrnas	3
promoter-minimal	3
thermodynamicalmodels	3
pluripotency	2
cns-database	2
binding	2
jshypotheses	2
ultraconserveddefinition	2
factorinteractions	2
grn	2
regulatory-flexibility	2
ciona-gene-annotation	2
spacing	2
coexpression	2
ncrna-long	2
strengthofmatch	2
cellsortingbasedanalysis	2
enhancer-stage-specificity	2
mammals	2
pvalue-multiplicity	2
pituitary	2
whyconserved	2
prediction	2
tfsynergy	2
drosophila	2
microarray	2
molecularbiologytools	2
histones	2
of	2
3putr	2
polymorphism	2
bullshitarticles	2
networks	2
codingconservation	2
core	2
site-prediction	2
assayscisregwetlab	2
rearrangement	2
genomiccontext	2
ascidians	2
protocols	2
doublets	1
books	1
genefamilyfootprinting	1
pax6	1
intra-primate	1
syntenypapers	1
olfactoryreceptors	1
fugu	1
decoy	1
fastindexing	1
enhancer-contextanalysis	1
hmm	1
nomotif	1
element	1
screening	1
gene_expression_databases	1
purificationfromdna	1
sites	1
dlx	1
writing	1
nucleosome	1
word	1
drosophia	1
genomeregulatoryblock	1
duplicatese	1
microarray-analysis	1
factorsclass	1
cns-enhancer	1
insertionsdeletions	1
positiveselection	1
kernel	1
primers	1
arx	1
autoregulation	1
igh	1
statistics	1
cell-cultures	1
suppressor	1
cns-enhance	1
generalregulation	1
ciona-gene-annotations	1
smarts	1
tr-reviews	1
transgenesis	1
impossible	1
genemodels	1
turnover	1
cns-difference	1
applicationbioinf	1
drosphila	1
noaccess	1
grns	1
cisregdatabase	1
phylogenytools	1
notconservedfunction	1
gibbs	1
bioinformatics	1
generegulatorynetworks	1
degeneratesites	1

maximilianh's chromatin [10 articles] Export

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