maximilianh's cis-trans [15 articles] Export

Recent papers added to maximilianh's library classified by the tag cis-trans. You can also see everyone's cis-trans.

	Experimental determination of the evolvability of a transcription factor. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 44. (3 November 2009), pp. 18650-18655. by Sebastian J. Maerkl, Stephen R. Quake posted to cis-trans by maximilianh on 2009-11-23 15:19:54 as along with 5 people kintoki emptyhb sameersoi aalibes bpcusack
	A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation [My Copy] Science, Vol. 324, No. 5927. (1 May 2009), pp. 659-662. by Itay Tirosh, Sharon Reikhav, Avraham A. Levy, Naama Barkai posted to cis-trans by maximilianh on 2009-05-01 17:34:10 as along with 8 people mjoach dbensasson dipenps absterga djkt jbhiatt emptyhb TRHvidsten
	Transcription regulation and animal diversity [My Copy] Nature, Vol. 424, No. 6945. (10 July 2003), pp. 147-151. by Michael Levine, Robert Tjian posted to cis-trans by maximilianh on 2009-04-02 17:55:35 as along with 10 people and 3 groups provero dlobo Lauren_Jones xico nickluscombe djkt lusk Jporci heliopais brant GEB WetBiology EBI-regulation
	The Evolution of Gene Regulation Underlies a Morphological Difference between Two Drosophila Sister Species. [My Copy] Cell, Vol. 132, No. 5. (7 March 2008), pp. 783-793. by S. Jeong, M. Rebeiz, P. Andolfatto, T. Werner, J. True, S. B. Carroll posted to cis-trans by maximilianh on 2009-04-02 14:14:11 as along with 3 people and 1 group athma Stew cisevol cis-regulatory-evolution
	Wings, Horns, and Butterfly Eyespots: How Do Complex Traits Evolve? [My Copy] PLoS Biology, Vol. 7, No. 2. (1 February 2009), e37. by Antónia Monteiro, Ondrej Podlaha posted to cis-trans by maximilianh on 2009-03-30 17:20:06 as along with 7 people carlk biomcgary provero stevanspringer skumagai idoerg jjray
	The evolutionary significance of cis-regulatory mutations [My Copy] Nature Reviews Genetics, Vol. 8, No. 3., pp. 206-216. by Gregory A. Wray posted to cis-trans by maximilianh on 2009-03-23 16:00:00 as along with 9 people and 4 groups athma provero brant dpollard dchughes lusk mimulus_99 cisevol emptyhb EisenLab G4ID Genetics-of-Gambling cis-regulatory-evolution
	The gene regulatory logic of transcription factor evolution. [My Copy] Trends in ecology & evolution (Personal edition) (21 May 2008) by Günter P P. Wagner, Vincent J J. Lynch posted to cis-trans by maximilianh on 2008-12-19 22:19:12 as along with 5 people bmajoros cambray Stew Garamonfok bpcusack
	Evolution of cis-regulatory sequences in Drosophila. [My Copy] Advances in genetics, Vol. 61 (2008), pp. 67-106. by P. Simpson, S. Ayyar posted to cis-trans by maximilianh on 2008-11-27 16:50:25 as
	THE LOCI OF EVOLUTION: HOW PREDICTABLE IS GENETIC EVOLUTION? [My Copy] Evolution; international journal of organic evolution (23 June 2008) by David L L. Stern, Virginie Orgogozo posted to cis-trans by maximilianh on 2008-11-11 16:53:34 as along with 2 people haloin bpcusack
	Divergence in cis-regulatory networks: taking the 'species' out of cross-species analysis [My Copy] Genome Biology, Vol. 9, No. 11. (2008) by Robert Zinzen, Eileen Furlong posted to cis-trans by maximilianh on 2008-11-10 09:13:11 as along with 4 people and 1 group roys natstreet cisevol caseybrown cis-regulatory-evolution
	PERSPECTIVE: RESURRECTING THE ROLE OF TRANSCRIPTION FACTOR CHANGE IN DEVELOPMENTAL EVOLUTION. [My Copy] Evolution; international journal of organic evolution (18 June 2008) by Vincent J J. Lynch, Günter P P. Wagner posted to cis-trans by maximilianh on 2008-11-10 09:10:11 as along with 1 person and 1 group bpcusack BergmanLab
	Complex genetic interactions underlying expression differences between Drosophila races: analysis of chromosome substitutions. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 17. (29 April 2008), pp. 6362-6367. by Hurng-Yi Y. Wang, Yonggui Fu, Mary Sara S. McPeek, et al.Xuemei Lu, Sergey Nuzhdin, Anlong Xu, Jian Lu, Mao-Lien L. Wu, Chung-I I. Wu posted to cis-trans factors motif by maximilianh on 2008-04-23 21:10:22 as along with 4 people daveGerrard roys djkt brant
	Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression [My Copy] Science, Vol. 317, No. 5844. (14 September 2007), pp. 1557-1560. by Christopher D. Brown, David S. Johnson, Arend Sidow posted to ciona cis-trans cluster cns-differences combination enhanceosome pwm by maximilianh on 2008-02-29 17:27:57 as along with 10 people and 2 groups pradiptaray dpollard djkt joepickrell zwang Garamonfok Stew mimulus_99 cisevol emptyhb EisenLab cis-regulatory-evolution
	Evolutionary changes in cis and trans gene regulation. [My Copy] Nature, Vol. 430 (Jul 2004), pp. 85-88. by Patricia Wittkopp, Belinda Haerum, Andrew Clark posted to cis-trans fromconnotea by maximilianh on 2007-09-23 12:59:15 as
	Population genomics of human gene expression. [My Copy] Nat Genet (Sep 2007) by Barbara Stranger, Alexandra Nica, Matthew Forrest, et al.Antigone Dimas, Christine Bird, Claude Beazley, Catherine Ingle, Mark Dunning, Paul Flicek, Daphne Koller, Stephen Montgomery, Simon Tavaré, Panos Deloukas, Emmanouil Dermitzakis posted to cis-trans fromconnotea by maximilianh on 2007-09-23 12:59:01 as

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fromconnotea	411
motif	174
discovery	127
duplicates	59
scanning	57
synteny	56
enhancer	55
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	30
cross-species-enhancer	28
noalignment	28
wnt	26
review	23
ncrna	22
conserved	21
phylogenomics	21
chipchip	19
alignment	19
phylogeny	18
transcription	18
ultraconserved	17
promoter	17
notconserved	16
rennes	16
repeated	16
cis-trans	15
otx	15
genome	14
pcr	14
whole	14
insulator	12
cluster	12
enhancerpromotercompatibility	12
disease	11
tools	11
pwm	11
websites	11
mirna	10
ciona	10
pwmimprovement	10
randombreakage	10
cns-ranking	10
chromatin	10
cns-enhancer-screen	10
dna	9
cns-collaboration	9
pitx	8
cns-similarity	8
promoters	8
genome-papers	8
3dstructure	8
genes	7
pwmcomparison	7
genomicregulatoryblocks	7
conservation	7
syntenytools	7
genomeregulatoryblocks	7
application	7
long-range	6
enhancer-screen	6
orthology	6
snp	6
phenotype	6
position	6
enhanceosome	6
promoterprediction	6
enhancer-vertebrate-invertebrate	6
bidirectionalpromoters	6
redundancy	6
comparative	5
methylation	5
genecoregulation	5
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similarity	5
textmining	5
chipseq	5
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microrna	5
expression	4
recognition	4
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region	4
comparison	4
introns	4
footprinting	4
wholegenomescanning	4
interchromosomal	4
otxpaper	4
enhancer-prediction	4
antisensetranscription	4
competition	4
silencer	4
mutations	3
phylotypicstage	3
copy-number-variation	3
ncrnas	3
enhancerincodingregion	3
regulatory	3
go	3
regions	3
thermodynamicalmodels	3
coding	3
genometrees	3
matrix	3
model-species	3
mirnaenhancer	3
rna-binding	3
cionapopulationgenetics	3
interaction	3
term_recognition	3
promoter-minimal	3
tf	3
evoluation	3
inter-cns-distances	3
composition	3
factorclass	3
trainingset	3
syntenyorientation	3
myarticles	3
encode	3
polymorphism	2
whyconserved	2
ultraconserveddefinition	2
drosophila	2
pluripotency	2
3putr	2
ncrna-long	2
of	2
molecularbiologytools	2
cns-database	2
factorinteractions	2
cellsortingbasedanalysis	2
networks	2
tfsynergy	2
bullshitarticles	2
strengthofmatch	2
protocols	2
histones	2
ciona-gene-annotation	2
regulatory-flexibility	2
enhancer-stage-specificity	2
site-prediction	2
genomiccontext	2
assayscisregwetlab	2
replicationorigins	2
spacing	2
microarray	2
rearrangement	2
core	2
pvalue-multiplicity	2
ascidians	2
binding	2
prediction	2
jshypotheses	2
codingconservation	2
grn	2
pituitary	2
mammals	2
sites	1
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arx	1
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smarts	1
word	1
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cell-cultures	1
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element	1
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grns	1
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decoy	1
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pax6	1
tr-reviews	1
impossible	1
turnover	1
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hmm	1
notconservedfunction	1
gibbs	1
nomotif	1
doublets	1
books	1
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fugu	1
fastindexing	1
writing	1
drosophia	1
insertionsdeletions	1
statistics	1
kernel	1
primers	1
igh	1
generalregulation	1
suppressor	1
genemodels	1
noaccess	1
cisregdatabase	1
ciona-gene-annotations	1
enhancer-contextanalysis	1
nucleosome	1

maximilianh's cis-trans [15 articles] Export

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