maximilianh's cns-ranking [10 articles] Export

Recent papers added to maximilianh's library classified by the tag cns-ranking. You can also see everyone's cns-ranking.

Hide details

	Conservation and implications of eukaryote transcriptional regulatory regions across multiple species [My Copy] BMC Genomics, Vol. 9 (20 December 2008), 623. by Lin, Minping Qian posted to cns-ranking enhancerprediction by maximilianh on 2009-03-23 14:29:22 as
	Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster [My Copy] Genome Res. (26 June 2008), gr.077131.108. by Alisha Holloway, David Begun, Adam Siepel, Katherine Pollard posted to cns-ranking coding by maximilianh on 2008-07-07 22:22:57 as along with 6 people and 2 groups daveGerrard valeriehilgers jbsaltz alhufton cisevol bpcusack cis-regulatory-evolution BergmanLab
	Cis-regulatory modules in the mammalian liver: composition depends on strength of Foxa2 consensus site [My Copy] Nucl. Acids Res., Vol. 36, No. 12. (1 July 2008), pp. 4149-4157. by Geetu Tuteja, Shane T. Jensen, Peter White, Klaus H. Kaestner posted to cns-ranking strengthofmatch by maximilianh on 2008-06-16 23:32:27 as along with 1 person gdb
	Local conservation scores without a priori assumptions on neutral substitution rates [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Janis Dingel, Pavol Hanus, Niccolo Leonardi, Joachim Hagenauer, Juergen Zech, Jakob Mueller posted to cns-ranking by maximilianh on 2008-04-13 12:17:59 as along with 4 people and 2 groups daveGerrard aprasad RamuAnandakrishnan cisevol cis-regulatory-evolution BergmanLab
	Annotation of cis-regulatory elements by identification, subclassification, and functional assessment of multispecies conserved sequences. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 28. (12 July 2005), pp. 9830-9835. by J. R. Hughes, J. F. Cheng, N. Ventress, et al.S. Prabhakar, K. Clark, E. Anguita, M. De Gobbi, P. de Jong, E. Rubin, D. R. Higgs posted to alignment cns cns-ranking enhancerprediction by maximilianh on 2008-03-05 10:24:56 as along with 1 person olympos
	Analysis of Sequence Conservation at Nucleotide Resolution [My Copy] PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e254. by Saurabh Asthana, Mikhail Roytberg, John Stamatoyannopoulos, Shamil Sunyaev posted to cns-ranking by maximilianh on 2008-01-04 16:10:25 as along with 4 people djkt GustavoLacerda nklee aprasad
	TFCONES: A database of vertebrate transcription factor-encoding genes and their associated conserved noncoding elements [My Copy] BMC Genomics, Vol. 8 (29 November 2007), 441. by Alison P. Lee, Yuchen Yang, Sydney Brenner, Byrappa Venkatesh posted to cns cns-ranking factors transcription by maximilianh on 2007-12-02 14:16:52 as along with 3 people nklee yevishere guhjy
	Dissecting the action of an evolutionary conserved non-coding region on renin promoter activity. [My Copy] Nucleic Acids Res (26 July 2007) by Ralf Mrowka, Andreas Steege, Charlotte Kaps, et al.Hanspeter Herzel, Bernd J J. Thiele, Pontus B B. Persson, Nils Blüthgen posted to cns cns-ranking by maximilianh on 2007-10-09 19:00:42 as along with 1 person sebastien_vigneau
	Large-scale analysis of transcriptional cis-regulatory modules reveals both common features and distinct subclasses [My Copy] Genome Biology, Vol. 8 (05 June 2007), R101. by Long Li, Qianqian Zhu, Xin He, Saurabh Sinha, Marc S. Halfon posted to cns cns-ranking by maximilianh on 2007-09-25 15:14:14 as along with 5 people and 1 group JustinCrocker dpollard lusk cjeans isimpson EisenLab
	Constructing a meaningful evolutionary average at the phylogenetic center of mass. [My Copy] BMC Bioinformatics, Vol. 8 (Jun 2007), pp. 222-222. by Eric Stone, Arend Sidow posted to cns-ranking fromconnotea by maximilianh on 2007-09-23 12:59:08 as

Note: You may cite this page as: http://www.citeulike.org/user/maximilianh/tag/cns-ranking

CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.

fromconnotea	411
motif	170
discovery	123
duplicates	59
scanning	57
enhancer	55
synteny	54
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	29
cross-species-enhancer	27
noalignment	27
wnt	26
review	23
ncrna	22
conserved	21
phylogenomics	21
alignment	19
phylogeny	18
transcription	18
chipchip	17
promoter	17
ultraconserved	17
notconserved	16
rennes	16
repeated	16
otx	15
cis-trans	14
genome	14
pcr	14
whole	14
cluster	12
enhancerpromotercompatibility	12
insulator	12
disease	11
pwm	11
chromatin	10
ciona	10
cns-enhancer-screen	10
cns-ranking	10
mirna	10
pwmimprovement	10
randombreakage	10
websites	10
cns-collaboration	9
dna	9
tools	9
3dstructure	8
cns-similarity	8
genome-papers	8
pitx	8
promoters	8
application	7
conservation	7
genes	7
genomeregulatoryblocks	7
genomicregulatoryblocks	7
pwmcomparison	7
bidirectionalpromoters	6
enhanceosome	6
enhancer-screen	6
enhancer-vertebrate-invertebrate	6
long-range	6
orthology	6
phenotype	6
position	6
promoterprediction	6
redundancy	6
snp	6
syntenytools	6
comparative	5
enhancer-and-repeats	5
enhancerdistances	5
genecoregulation	5
methylation	5
microrna	5
similarity	5
structure	5
textmining	5
validated	5
antisensetranscription	4
chipseq	4
comparison	4
competition	4
enhancersharing	4
expression	4
footprinting	4
interchromosomal	4
introns	4
otxpaper	4
recognition	4
region	4
silencer	4
wholegenomescanning	4
cionapopulationgenetics	3
coding	3
composition	3
copy-number-variation	3
encode	3
enhancerincodingregion	3
evoluation	3
factorclass	3
genometrees	3
go	3
interaction	3
inter-cns-distances	3
matrix	3
mirnaenhancer	3
model-species	3
mutations	3
myarticles	3
ncrnas	3
phylotypicstage	3
promoter-minimal	3
regions	3
regulatory	3
rna-binding	3
syntenyorientation	3
term_recognition	3
tf	3
thermodynamicalmodels	3
trainingset	3
3putr	2
ascidians	2
assayscisregwetlab	2
binding	2
bullshitarticles	2
cellsortingbasedanalysis	2
ciona-gene-annotation	2
cns-database	2
core	2
drosophila	2
enhancer-prediction	2
enhancer-stage-specificity	2
factorinteractions	2
genomiccontext	2
grn	2
histones	2
jshypotheses	2
mammals	2
microarray	2
molecularbiologytools	2
ncrna-long	2
networks	2
of	2
pituitary	2
pluripotency	2
polymorphism	2
prediction	2
protocols	2
pvalue-multiplicity	2
rearrangement	2
regulatory-flexibility	2
replicationorigins	2
site-prediction	2
spacing	2
strengthofmatch	2
tfsynergy	2
ultraconserveddefinition	2
whyconserved	2
applicationbioinf	1
arx	1
autoregulation	1
bioinformatics	1
books	1
cell-cultures	1
ciona-gene-annotations	1
cisregdatabase	1
cns-difference	1
cns-enhance	1
cns-enhancer	1
codingconservation	1
decoy	1
degeneratesites	1
dlx	1
doublets	1
drosophia	1
drosphila	1
duplicatese	1
element	1
enhancer-contextanalysis	1
factorsclass	1
fastindexing	1
fugu	1
genefamilyfootprinting	1
genemodels	1
generalregulation	1
generegulatorynetworks	1
gibbs	1
grns	1
hmm	1
igh	1
impossible	1
insertionsdeletions	1
intra-primate	1
kernel	1
noaccess	1
nomotif	1
notconservedfunction	1
nucleosome	1
olfactoryreceptors	1
pax6	1
phylogenytools	1
positiveselection	1
primers	1
purificationfromdna	1
sites	1
smarts	1
statistics	1
suppressor	1
syntenypapers	1
transgenesis	1
tr-reviews	1
turnover	1
word	1
writing	1

maximilianh's cns-ranking [10 articles] Export

maximilianh's tags