maximilianh's cns-enhancer-screen [10 articles] Export

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	High-throughput enhancer trap by remobilization of transposon <I>Minos</I> in <I>Ciona intestinalis</I> [My Copy] genesis, Vol. 45, No. 5. (2007), pp. 307-317. by Satoko Awazu, Terumi Matsuoka, Kazuo Inaba, Nori Satoh, Yasunori Sasakura posted to cns-enhancer-screen enhancer-screen by maximilianh on 2008-09-05 09:40:15 as along with 1 person Auger
	Separate proteolipid protein/DM20 enhancers serve different lineages and stages of development. [My Copy] The Journal of neuroscience : the official journal of the Society for Neuroscience, Vol. 28, No. 27. (2 July 2008), pp. 6895-6903. by M. C. Tuason, A. Rastikerdar, T. Kuhlmann, et al.C. Goujet-Zalc, B. Zalc, S. Dib, H. Friedman, A. Peterson posted to cns-enhancer-screen enhancer-stage-specificity by maximilianh on 2008-07-07 10:17:05 as
	The words of the regulatory code are arranged in a variable manner in highly conserved enhancers. [My Copy] Developmental biology, Vol. 318, No. 2. (15 June 2008), pp. 366-377. by Sepand Rastegar, Isabell Hess, Thomas Dickmeis, et al.Jean Christophe C. Nicod, Raymond Ertzer, Yavor Hadzhiev, Wolf-Gerolf G. Thies, Gerd Scherer, Uwe Strähle posted to cns-differences cns-enhancer-screen cns-similarity core notconserved by maximilianh on 2008-05-06 23:57:24 as along with 3 people and 1 group lusk brant cisevol cis-regulatory-evolution
	Detection and characterization of silencers and enhancer-blockers in the greater CFTR locus. [My Copy] Genome research, Vol. 18, No. 8. (24 August 2008), pp. 1238-1246. by H. M. Petrykowska, C. M. Vockley, L. Elnitski posted to cns-enhancer-screen enhancer insulator silencer by maximilianh on 2008-04-28 18:10:00 as along with 1 person and 1 group sebastien_vigneau CTCF
	A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts [My Copy] Genome Res., Vol. 15, No. 8. (1 August 2005), pp. 1061-1072. by de La, Carmen G. Feijoo, Miguel Manzanares, et al.Juan J. Tena, Elisa Rodriguez-Seguel, Annalisa Letizia, Miguel L. Allende, Jose L. Gomez-Skarmeta posted to cns-enhancer-screen cross-species-enhancer by maximilianh on 2008-04-07 15:59:50 as
	Conservation of RET Regulatory Function from Human to Zebrafish Without Sequence Similarity. [My Copy] Science (23 March 2006) by Shannon Fisher, Elizabeth A A. Grice, Ryan M M. Vinton, Seneca L L. Bessling, Andrew S S. McCallion posted to cns-enhancer-screen cross-species-enhancer notconserved by maximilianh on 2008-04-07 15:40:21 as along with 5 people and 3 groups aprasad adepace nickluscombe cisevol emptyhb EisenLab EBI-regulation cis-regulatory-evolution
	Control of kidney, eye and limb expression of Bmp7 by an enhancer element highly conserved between species. [My Copy] Dev Biol, Vol. 311, No. 2. (15 November 2007), pp. 679-690. by D. Adams, M. Karolak, E. Robertson, L. Oxburgh posted to cns-enhancer-screen enhancer by maximilianh on 2008-03-26 09:36:30 as
	Human-zebrafish non-coding conserved elements act in vivo to regulate transcription [My Copy] Nucl. Acids Res., Vol. 33, No. 17. (22 September 2005), pp. 5437-5445. by Jordan T. Shin, James R. Priest, Ivan Ovcharenko, et al.Amy Ronco, Rachel K. Moore, Geoffrey C. Burns, Calum A. Macrae posted to cns cns-enhancer-screen enhancer syntenypaper by maximilianh on 2008-01-15 19:53:21 as along with 1 person djkt
	Highly conserved non-coding sequences are associated with vertebrate development. [My Copy] PLoS Biol, Vol. 3, No. 1. (January 2005) by A. Woolfe, M. Goodson, D. K. Goode, et al.P. Snell, G. K. McEwen, T. Vavouri, S. F. Smith, P. North, H. Callaway, K. Kelly, K. Walter, I. Abnizova, W. Gilks, Y. J. Edwards, J. E. Cooke, G. Elgar posted to cns cns-enhancer-screen by maximilianh on 2007-10-08 11:22:09 as along with 12 people and 3 groups daveGerrard aprasad diamantis nklee bryankr awoolfe djkt sujaikumar Stew cisevol rrhudson gelgar BergmanLab EisenLab cis-regulatory-evolution
	Long-range downstream enhancers are essential for Pax6 expression. [My Copy] Developmental biology, Vol. 299 (Nov 2006), pp. 563-581. by Dirk Kleinjan, Anne Seawright, Sebastien Mella, et al.Catherine Carr, David Tyas, T. Simpson, John Mason, David Price, Veronica Van Heyningen posted to cns-enhancer-screen fromconnotea long-range mammals by maximilianh on 2007-09-23 12:59:14 as

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fromconnotea	411
motif	175
discovery	128
duplicates	59
scanning	57
synteny	56
enhancer	55
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	30
cross-species-enhancer	28
noalignment	28
wnt	26
review	23
ncrna	22
phylogenomics	21
conserved	21
alignment	19
chipchip	19
phylogeny	18
transcription	18
promoter	17
ultraconserved	17
notconserved	16
repeated	16
rennes	16
cis-trans	15
otx	15
whole	14
genome	14
pcr	14
enhancerpromotercompatibility	12
insulator	12
cluster	12
tools	11
pwm	11
websites	11
disease	11
randombreakage	10
mirna	10
ciona	10
cns-ranking	10
chromatin	10
pwmimprovement	10
cns-enhancer-screen	10
dna	9
cns-collaboration	9
genome-papers	8
promoters	8
cns-similarity	8
3dstructure	8
genomicregulatoryblocks	8
pitx	8
genes	7
syntenytools	7
pwmcomparison	7
genomeregulatoryblocks	7
application	7
conservation	7
long-range	6
enhancer-screen	6
orthology	6
snp	6
phenotype	6
position	6
enhanceosome	6
promoterprediction	6
enhancer-vertebrate-invertebrate	6
bidirectionalpromoters	6
redundancy	6
comparative	5
methylation	5
enhancer-and-repeats	5
genecoregulation	5
enhancerdistances	5
similarity	5
textmining	5
chipseq	5
validated	5
structure	5
microrna	5
footprinting	4
recognition	4
comparison	4
introns	4
enhancersharing	4
region	4
wholegenomescanning	4
competition	4
silencer	4
enhancer-prediction	4
interchromosomal	4
otxpaper	4
expression	4
antisensetranscription	4
interaction	4
ncrnas	3
phylotypicstage	3
copy-number-variation	3
go	3
enhancerincodingregion	3
regulatory	3
thermodynamicalmodels	3
regions	3
coding	3
matrix	3
mutations	3
model-species	3
mirnaenhancer	3
promoter-minimal	3
cionapopulationgenetics	3
genometrees	3
rna-binding	3
term_recognition	3
tf	3
evoluation	3
inter-cns-distances	3
composition	3
factorclass	3
trainingset	3
syntenyorientation	3
myarticles	3
encode	3
ascidians	2
whyconserved	2
polymorphism	2
ultraconserveddefinition	2
binding	2
3putr	2
of	2
cellsortingbasedanalysis	2
histones	2
replicationorigins	2
drosophila	2
cns-database	2
codingconservation	2
pluripotency	2
tfsynergy	2
bullshitarticles	2
strengthofmatch	2
networks	2
mammals	2
ciona-gene-annotation	2
regulatory-flexibility	2
microarray	2
enhancer-stage-specificity	2
molecularbiologytools	2
assayscisregwetlab	2
factorinteractions	2
spacing	2
site-prediction	2
rearrangement	2
genomiccontext	2
prediction	2
pvalue-multiplicity	2
ncrna-long	2
core	2
jshypotheses	2
protocols	2
pituitary	2
grn	2
syntenypapers	1
coexpression	1
microarray-analysis	1
arx	1
purificationfromdna	1
smarts	1
word	1
factorsclass	1
genomeregulatoryblock	1
cell-cultures	1
degeneratesites	1
bioinformatics	1
drosphila	1
transgenesis	1
positiveselection	1
cns-enhancer	1
element	1
intra-primate	1
duplicatese	1
genefamilyfootprinting	1
generegulatorynetworks	1
grns	1
decoy	1
applicationbioinf	1
cns-enhance	1
autoregulation	1
phylogenytools	1
hmm	1
pax6	1
tr-reviews	1
impossible	1
turnover	1
cns-difference	1
nomotif	1
notconservedfunction	1
gibbs	1
sites	1
doublets	1
books	1
dlx	1
olfactoryreceptors	1
fugu	1
fastindexing	1
writing	1
drosophia	1
statistics	1
insertionsdeletions	1
kernel	1
primers	1
generalregulation	1
igh	1
suppressor	1
genemodels	1
noaccess	1
cisregdatabase	1
ciona-gene-annotations	1
enhancer-contextanalysis	1
nucleosome	1

maximilianh's cns-enhancer-screen [10 articles] Export

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