maximilianh's repeated [16 articles] Export

Recent papers added to maximilianh's library classified by the tag repeated. You can also see everyone's repeated.

	Exaptation of an ancient Alu short interspersed element provides a highly conserved vitamin D-mediated innate immune response in humans and primates. [My Copy] BMC genomics, Vol. 10, No. 1. (16 July 2009), 321. by Adrian F. Gombart, Tsuyako Saito, H. Phillip Koeffler posted to repeated by maximilianh on 2009-07-21 16:20:10 as along with 2 people and 2 groups KGelling cisevol cis-regulatory-evolution BergmanLab
	Evolution of the mammalian transcription factor binding repertoire via transposable elements [My Copy] Genome Research, Vol. 18, No. 11. (5 November 2008), pp. 1752-1762. by Guillaume Bourque, Bernard Leong, Vinsensius B. Vega, et al.Xi Chen, Yen L. Lee, Kandhadayar G. Srinivasan, Joon-Lin Chew, Yijun Ruan, Chia-Lin Wei, Huck H. Ng, Edison T. Liu posted to enhancer-and-repeats repeated by maximilianh on 2008-10-30 20:01:29 as along with 3 people and 2 groups operon mhiromi cisevol cis-regulatory-evolution BergmanLab
	Gene regulation by SINES and inosines: Biological consequences of A-to-I editing of Alu element inverted repeats. [My Copy] Cell cycle (Georgetown, Tex.), Vol. 7, No. 21. (5 November 2008) by Ling-Ling L. Chen, Gordon G. Carmichael posted to enhancer-and-repeats repeated by maximilianh on 2008-10-26 10:09:42 as
	Screening and validation of dinucleotide repeats in intron 1 of the human EGFR gene and its paralog in the HER2 gene. [My Copy] Journal of receptor and signal transduction research, Vol. 28, No. 5. (2008), pp. 475-483. by N. Kharrat, S. Al'Fadhli, A. Rebaï posted to enhancer-and-repeats repeated by maximilianh on 2008-10-25 14:53:21 as
	Microsatellites are EWS/FLI response elements: Genomic "junk" is EWS/FLI's treasure. [My Copy] Cell cycle (Georgetown, Tex.), Vol. 7, No. 20. (October 2008), pp. 3127-3132. by K. Gangwal, S. L. Lessnick posted to enhancer-and-repeats repeated by maximilianh on 2008-10-23 16:18:10 as
	A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity [My Copy] Genome Research, Vol. 18, No. 9. (7 September 2008), pp. 1422-1432. by Aileen M. Smith, Maria-Jose Sanchez, George A. Follows, et al.Sarah Kinston, Ian J. Donaldson, Anthony R. Green, Berthold GÃ¶ttgens posted to repeated enhancer-and-repeats cns-collaboration by maximilianh on 2008-09-29 14:19:12 as along with 4 people and 2 groups operon cisstem emptyhb cisevol BergmanLab cis-regulatory-evolution
	RetroPred: A tool for prediction, classification and extraction of non-LTR retrotransposons (LINEs & SINEs) from the genome by integrating PALS, PILER, MEME and ANN. [My Copy] Bioinformation, Vol. 2, No. 6. (2008), pp. 263-270. by P. K. Naik, V. K. Mittal, S. Gupta posted to repeated by maximilianh on 2008-03-09 19:41:47 as
	AtCopeg1, the unique gene originated from AtCopia95 retrotransposon family, is sensitive to external hormones and abiotic stresses. [My Copy] Plant Cell Rep (29 February 2008) by Ke Duan, Xiangzhen Ding, Qiong Zhang, Hong Zhu, Aihu Pan, Jianhua Huang posted to repeated by maximilianh on 2008-03-02 00:01:40 as
	Genome organization and gene expression shape the transposable element distribution in the Drosophila melanogaster euchromatin. [My Copy] PLoS genetics, Vol. 3, No. 11. (30 November 2007) by Pierre Fontanillas, Daniel L. Hartl, Max Reuter posted to repeated by maximilianh on 2008-02-19 10:08:35 as along with 5 people timflutre inesdesantiago emptyhb bpcusack shoshin
	Genome-wide B1 retrotransposon binds the transcription factors dioxin receptor and Slug and regulates gene expression in vivo. [My Copy] Proc Natl Acad Sci U S A (25 January 2008) by Angel Carlos C. Roman, Dixan A A. Benitez, Jose M M. Carvajal-Gonzalez, Pedro M M. Fernandez-Salguero posted to repeated by maximilianh on 2008-01-29 22:00:56 as along with 1 person and 2 groups cisevol cis-regulatory-evolution BergmanLab
	Conserved eukaryotic transposable elements and the evolution of gene regulation. [My Copy] Cell Mol Life Sci (20 November 2007) by J Jurka posted to repeated by maximilianh on 2007-11-28 10:21:34 as along with 5 people and 2 groups gpappas dchughes Stew cisevol idonaldson cis-regulatory-evolution BergmanLab
	Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53 [My Copy] Proceedings of the National Academy of Sciences (14 November 2007), 0703637104. by Ting Wang, Jue Zeng, Craig B. Lowe, et al.Robert G. Sellers, Sofie R. Salama, Min Yang, Shawn M. Burgess, Rainer K. Brachmann, David Haussler* posted to cns repeated by maximilianh on 2007-11-17 10:02:15 as along with 1 person oelemento
	Restriction of transgene expression to the B-lymphoid progeny of human lentivirally transduced CD34+ cells. [My Copy] Molecular therapy : the journal of the American Society of Gene Therapy, Vol. 10 (Jul 2004), pp. 45-56. by Thomas Moreau, Florence Bardin, Jean Imbert, Christian Chabannon, Cécile Tonnelle posted to region repeated fromconnotea by maximilianh on 2007-09-23 12:59:14 as
	Thousands of human mobile element fragments undergo strong purifying selection near developmental genes [My Copy] Proceedings of the National Academy of Sciences, Vol. 104 (May 2007), pp. 8005-8010. by Craig Lowe, Gill Bejerano, David Haussler posted to region repeated fromconnotea by maximilianh on 2007-09-23 12:59:10 as
	A family of conserved noncoding elements derived from an ancient transposable element. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103 (Aug 2006), pp. 11659-11664. by Xiaohui Xie, Michael Kamal, Eric Lander posted to region repeated fromconnotea by maximilianh on 2007-09-23 12:59:02 as
	Functional sequestration of transcription factor activity by repetitive DNA. [My Copy] The Journal of biological chemistry, Vol. 282 (Jul 2007), pp. 20868-20876. by Xiaowei Liu, Bo Wu, Jaroslaw Szary, Eric Kofoed, Fred Schaufele posted to region repeated fromconnotea by maximilianh on 2007-09-23 12:59:01 as

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fromconnotea	411
motif	174
discovery	127
duplicates	59
scanning	57
synteny	56
enhancer	55
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	30
noalignment	28
cross-species-enhancer	28
wnt	26
review	23
ncrna	22
phylogenomics	21
conserved	21
alignment	19
chipchip	18
transcription	18
phylogeny	18
promoter	17
ultraconserved	17
repeated	16
notconserved	16
rennes	16
otx	15
cis-trans	15
genome	14
whole	14
pcr	14
cluster	12
insulator	12
enhancerpromotercompatibility	12
pwm	11
websites	11
tools	11
disease	11
ciona	10
randombreakage	10
mirna	10
cns-ranking	10
chromatin	10
cns-enhancer-screen	10
pwmimprovement	10
dna	9
cns-collaboration	9
promoters	8
genome-papers	8
cns-similarity	8
3dstructure	8
pitx	8
application	7
genomeregulatoryblocks	7
genomicregulatoryblocks	7
pwmcomparison	7
conservation	7
genes	7
syntenytools	7
orthology	6
snp	6
redundancy	6
bidirectionalpromoters	6
enhancer-vertebrate-invertebrate	6
long-range	6
phenotype	6
enhanceosome	6
enhancer-screen	6
position	6
promoterprediction	6
comparative	5
validated	5
microrna	5
chipseq	5
similarity	5
genecoregulation	5
structure	5
textmining	5
enhancer-and-repeats	5
enhancerdistances	5
methylation	5
antisensetranscription	4
comparison	4
silencer	4
region	4
competition	4
otxpaper	4
interchromosomal	4
introns	4
expression	4
footprinting	4
enhancersharing	4
recognition	4
wholegenomescanning	4
composition	3
matrix	3
mutations	3
cionapopulationgenetics	3
promoter-minimal	3
encode	3
model-species	3
mirnaenhancer	3
enhancer-prediction	3
go	3
thermodynamicalmodels	3
myarticles	3
copy-number-variation	3
enhancerincodingregion	3
regions	3
interaction	3
term_recognition	3
syntenyorientation	3
tf	3
evoluation	3
inter-cns-distances	3
genometrees	3
coding	3
phylotypicstage	3
factorclass	3
trainingset	3
regulatory	3
rna-binding	3
ncrnas	3
pluripotency	2
spacing	2
microarray	2
pvalue-multiplicity	2
genomiccontext	2
molecularbiologytools	2
cellsortingbasedanalysis	2
polymorphism	2
rearrangement	2
networks	2
bullshitarticles	2
pituitary	2
drosophila	2
whyconserved	2
prediction	2
assayscisregwetlab	2
codingconservation	2
tfsynergy	2
strengthofmatch	2
protocols	2
replicationorigins	2
binding	2
mammals	2
of	2
histones	2
cns-database	2
enhancer-stage-specificity	2
ncrna-long	2
factorinteractions	2
ultraconserveddefinition	2
jshypotheses	2
site-prediction	2
ascidians	2
grn	2
regulatory-flexibility	2
ciona-gene-annotation	2
3putr	2
core	2
kernel	1
cell-cultures	1
smarts	1
syntenypapers	1
nucleosome	1
genefamilyfootprinting	1
enhancer-contextanalysis	1
decoy	1
coexpression	1
arx	1
purificationfromdna	1
hmm	1
word	1
factorsclass	1
phylogenytools	1
pax6	1
degeneratesites	1
nomotif	1
bioinformatics	1
sites	1
transgenesis	1
positiveselection	1
cns-enhancer	1
element	1
intra-primate	1
dlx	1
duplicatese	1
generegulatorynetworks	1
grns	1
applicationbioinf	1
cns-enhance	1
autoregulation	1
tr-reviews	1
impossible	1
turnover	1
cns-difference	1
notconservedfunction	1
gibbs	1
doublets	1
books	1
olfactoryreceptors	1
fugu	1
ciona-gene-annotations	1
fastindexing	1
statistics	1
writing	1
drosophia	1
generalregulation	1
insertionsdeletions	1
drosphila	1
primers	1
igh	1
suppressor	1
genemodels	1
noaccess	1
cisregdatabase	1

maximilianh's repeated [16 articles] Export

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