maximilianh's transcription [18 articles] Export

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	Experimentally based contact energies decode interactions responsible for protein-DNA affinity and the role of molecular waters at the binding interface. [My Copy] Nucleic acids research, Vol. 37, No. 12. (1 July 2009), pp. 4076-4088. by N. Alpay Temiz, Carlos J. Camacho posted to factorclass factors tf transcription by maximilianh on 2009-08-06 21:32:14 as along with 1 person aalibes
	Uncovering cis regulatory codes using synthetic promoter shuffling. [My Copy] PLoS ONE, Vol. 3, No. 4. (2008) by A. Kinkhabwala, C. C. Guet posted to factors generalregulation transcription by maximilianh on 2008-05-30 15:24:56 as along with 2 people boko4ikameto lusk
	Implementing arithmetic and other analytic operations by transcriptional regulation. [My Copy] PLoS computational biology, Vol. 4, No. 4. (April 2008) by S. M. Cory, T. J. Perkins posted to combination factors transcription by maximilianh on 2008-04-28 18:07:18 as along with 6 people and 1 group balabu bayesian jjray eskay dquest dbikard SynBioSys
	Prediction of synergistic transcription factors by function conservation [My Copy] Genome Biology, Vol. 8, No. 12. (2007) by Zihua Hu, Boyu Hu, James Collins posted to cluster factors noalignment tfsynergy transcription by maximilianh on 2007-12-08 15:12:16 as along with 3 people and 1 group cjeans nklee ale cis-regulatory-evolution
	TFCONES: A database of vertebrate transcription factor-encoding genes and their associated conserved noncoding elements [My Copy] BMC Genomics, Vol. 8 (29 November 2007), 441. by Alison P. Lee, Yuchen Yang, Sydney Brenner, Byrappa Venkatesh posted to cns cns-ranking factors transcription by maximilianh on 2007-12-02 14:16:52 as along with 3 people nklee yevishere guhjy
	Transposase-Derived Transcription Factors Regulate Light Signaling in Arabidopsis [My Copy] Science, Vol. 318, No. 5854. (23 November 2007), pp. 1302-1305. by Rongcheng Lin, Lei Ding, Claudio Casola, Daniel R. Ripoll, Cedric Feschotte, Haiyang Wang posted to factors transcription by maximilianh on 2007-11-23 17:16:54 as
	Prediction of Specific Protein-DNA Recognition by Knowledge-based Two-body and Three-body Interaction Potentials. [My Copy] Conf Proc IEEE Eng Med Biol Soc, Vol. 1 (2007), pp. 5017-5020. by Guijun Zhao, Matthew B B. Carson, Hui Lu posted to factors transcription by maximilianh on 2007-11-17 10:01:59 as
	Discovering motifs with transcription factor domain knowledge. [My Copy] Pac Symp Biocomput (2007), pp. 472-483. by H. C. Leung, F. Y. Chin, B. M. Chan posted to discovery factors motif transcription by maximilianh on 2007-11-14 13:26:18 as along with 1 person idonaldson
	Loss of androgen receptor binding to selective androgen response elements causes a reproductive phenotype in a knockin mouse model [My Copy] Proceedings of the National Academy of Sciences, Vol. 104 (Mar 2007), pp. 4961-4966. by Kris Schauwaers, Karel De Gendt, Philippa Saunders, et al.Nina Atanassova, Annemie Haelens, Leen Callewaert, Udo Moehren, Johannes Swinnen, Guido Verhoeven, Guy Verrijdt, Frank Claessens posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:11 as
	Alternative routes and mutational robustness in complex regulatory networks. [My Copy] Bio Systems, Vol. 88 (Mar 2007), pp. 163-172. by Andreas Wagner, Jeremiah Wright posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:10 as
	Video: Seminar about the ETS family of transcription factors at Agilent [My Copy] posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:05 as
	Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-beta enhancer. [My Copy] Molecular cell, Vol. 26 (Jun 2007), pp. 703-716. by Carlos Escalante, Estanislao N. Villán, Leyi Shen, Adolfo G. Sastre, Aneel Aggarwal posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:05 as
	Prediction of DNA-binding residues from sequence -- Ofran et al. 23 (13): i347 -- Bioinformatics [My Copy] posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:04 as
	Inferring protein DNA dependencies using motif alignments and mutual information -- Mahony et al. 23 (13): i297 -- Bioinformatics [My Copy] posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:04 as
	Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family [My Copy] Genes and Development, Vol. 21 (Aug 2007), pp. 1882-1894. by Peter Hollenhorst, Atul Shah, Christopher Hopkins, Barbara Graves posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:03 as
	Prediction of cis-regulatory elements for drug-activated transcription factors in the regulation of drug-metabolising enzymes and drug transporters. [My Copy] Expert opinion on drug metabolism & toxicology, Vol. 2 (Jun 2006), pp. 367-379. by Michael Podvinec, Urs Meyer posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:02 as
	Correlation between binding rate constants and individual information of E. coli Fis binding sites -- Shultzaberger et al. 35 (16): 5275 -- Nucleic Acids Research [My Copy] posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:01 as
	Transcriptional regulation by competing transcription factor modules. [My Copy] PLoS computational biology, Vol. 2 (Dec 2006), pp. 164-164. by Rutger Hermsen, Sander Tans, Pieter Ten posted to factors transcription fromconnotea by maximilianh on 2007-09-23 12:59:01 as

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fromconnotea	411
motif	172
discovery	125
duplicates	59
scanning	57
synteny	56
enhancer	55
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
factors	32
cns	31
geneorder	29
cross-species-enhancer	28
noalignment	28
wnt	26
review	23
ncrna	22
conserved	21
phylogenomics	21
alignment	19
phylogeny	18
transcription	18
chipchip	17
promoter	17
ultraconserved	17
notconserved	16
rennes	16
repeated	16
cis-trans	15
otx	15
genome	14
pcr	14
whole	14
cluster	12
enhancerpromotercompatibility	12
insulator	12
disease	11
pwm	11
tools	11
websites	11
chromatin	10
ciona	10
cns-enhancer-screen	10
cns-ranking	10
mirna	10
pwmimprovement	10
randombreakage	10
cns-collaboration	9
dna	9
3dstructure	8
cns-similarity	8
genome-papers	8
pitx	8
promoters	8
application	7
conservation	7
genes	7
genomeregulatoryblocks	7
genomicregulatoryblocks	7
pwmcomparison	7
syntenytools	7
bidirectionalpromoters	6
enhanceosome	6
enhancer-screen	6
enhancer-vertebrate-invertebrate	6
long-range	6
orthology	6
phenotype	6
position	6
promoterprediction	6
redundancy	6
snp	6
chipseq	5
comparative	5
enhancer-and-repeats	5
enhancerdistances	5
genecoregulation	5
methylation	5
microrna	5
similarity	5
structure	5
textmining	5
validated	5
antisensetranscription	4
comparison	4
competition	4
enhancersharing	4
expression	4
footprinting	4
interchromosomal	4
introns	4
otxpaper	4
recognition	4
region	4
silencer	4
wholegenomescanning	4
cionapopulationgenetics	3
coding	3
composition	3
copy-number-variation	3
encode	3
enhancerincodingregion	3
enhancer-prediction	3
evoluation	3
factorclass	3
genometrees	3
go	3
interaction	3
inter-cns-distances	3
matrix	3
mirnaenhancer	3
model-species	3
mutations	3
myarticles	3
ncrnas	3
phylotypicstage	3
promoter-minimal	3
regions	3
regulatory	3
rna-binding	3
syntenyorientation	3
term_recognition	3
tf	3
thermodynamicalmodels	3
trainingset	3
3putr	2
ascidians	2
assayscisregwetlab	2
binding	2
bullshitarticles	2
cellsortingbasedanalysis	2
ciona-gene-annotation	2
cns-database	2
codingconservation	2
core	2
drosophila	2
enhancer-stage-specificity	2
factorinteractions	2
genomiccontext	2
grn	2
histones	2
jshypotheses	2
mammals	2
microarray	2
molecularbiologytools	2
ncrna-long	2
networks	2
of	2
pituitary	2
pluripotency	2
polymorphism	2
prediction	2
protocols	2
pvalue-multiplicity	2
rearrangement	2
regulatory-flexibility	2
replicationorigins	2
site-prediction	2
spacing	2
strengthofmatch	2
tfsynergy	2
ultraconserveddefinition	2
whyconserved	2
applicationbioinf	1
arx	1
autoregulation	1
bioinformatics	1
books	1
cell-cultures	1
ciona-gene-annotations	1
cisregdatabase	1
cns-difference	1
cns-enhance	1
cns-enhancer	1
decoy	1
degeneratesites	1
dlx	1
doublets	1
drosophia	1
drosphila	1
duplicatese	1
element	1
enhancer-contextanalysis	1
factorsclass	1
fastindexing	1
fugu	1
genefamilyfootprinting	1
genemodels	1
generalregulation	1
generegulatorynetworks	1
gibbs	1
grns	1
hmm	1
igh	1
impossible	1
insertionsdeletions	1
intra-primate	1
kernel	1
noaccess	1
nomotif	1
notconservedfunction	1
nucleosome	1
olfactoryreceptors	1
pax6	1
phylogenytools	1
positiveselection	1
primers	1
purificationfromdna	1
sites	1
smarts	1
statistics	1
suppressor	1
syntenypapers	1
transgenesis	1
tr-reviews	1
turnover	1
word	1
writing	1

maximilianh's transcription [18 articles] Export

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