maximilianh's websites [11 articles] Export

Recent papers added to maximilianh's library classified by the tag websites. You can also see everyone's websites.

	CoGe: GEvo [My Copy] posted to websites tools synteny by maximilianh on 2009-11-20 15:30:12 as
	CEAS: cis-regulatory element annotation system [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2605-2606. by Hyunjin Shin, Tao Liu, Arjun K. Manrai, X. Shirley Liu posted to websites chipseq by maximilianh on 2009-11-04 13:41:58 as along with 6 people bsamal druvus ewilban1 guhjy idonaldson nuin
	D-MATRIX: A web tool for constructing weight matrix of conserved DNA motifs. [My Copy] Bioinformation, Vol. 3, No. 10. (2009), pp. 415-418. by Naresh Sen, Manoj Mishra, Feroz Khan, Abha Meena, Ashok Sharma posted to websites tools motif by maximilianh on 2009-10-05 19:09:34 as
	MEME SUITE: tools for motif discovery and searching. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W202-208. by Timothy L. Bailey, Mikael Boden, Fabian A. Buske, et al.Martin Frith, Charles E. Grant, Luca Clementi, Jingyuan Ren, Wilfred W. Li, William S. Noble posted to websites tools motif by maximilianh on 2009-09-17 12:13:05 as along with 7 people bsamal suizifish jlike natstreet idonaldson nuin cassj
	PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups. [My Copy] BMC genomics, Vol. 9 (26 November 2008), 561. by Wen-Chi C. Chang, Tzong-Yi Y. Lee, Hsien-Da D. Huang, His-Yuan Y. Huang, Rong-Long L. Pan posted to combination motif scanning websites by maximilianh on 2008-11-29 13:28:39 as along with 3 people tg150 lptolik agustinarce
	CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008), 495. by Matthew S. Hestand, Michiel van Galen, Michel P. Villerius, Gert-Jan J. van Ommen, Johan T. den Dunnen, Peter A. 't Hoen posted to conserved motif scanning tools websites by maximilianh on 2008-11-27 09:21:41 as along with 10 people and 1 group bsamal farhat avilella heliopais lptolik nklee nuin GustavoLacerda natstreet druvus Ensembl Compara citations
	Motif Tool Manager: a web-based framework for motif discovery [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2930-2931. by Vinhthuy Phan, Nicholas A. Furlotte posted to motif tools websites by maximilianh on 2008-11-23 22:13:13 as along with 6 people bsamal wowalz nklee nuin natstreet druvus
	YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae. [My Copy] Nucleic Acids Res (21 November 2007) by Pedro T T. Monteiro, Nuno D D. Mendes, Miguel C C. Teixeira, et al.Sofia d'Orey, Sandra Tenreiro, Nuno P P. Mira, Hélio Pais, Alexandre P P. Francisco, Alexandra M M. Carvalho, Artur B B. Lourenço, Isabel Sá-Correia, Arlindo L L. Oliveira, Ana T T. Freitas posted to discovery motif websites by maximilianh on 2007-11-24 16:19:23 as along with 2 people Borelli heliopais
	CONDOR: a database resource of developmentally associated conserved non-coding elements [My Copy] BMC Developmental Biology, Vol. 7 (30 August 2007), 100. by Adam Woolfe, Debbie K. Goode, Julie Cooke, et al.Heather Callaway, Sarah Smith, Phil Snell, Gayle K. Mcewen, Greg Elgar posted to cns-database tools websites by maximilianh on 2007-11-13 17:50:58 as along with 1 person and 1 group Stew EisenLab
	dPattern: Binding Site Discovery [My Copy] posted to websites fromconnotea by maximilianh on 2007-09-23 12:59:08 as
	CAP3/PCAP Download [My Copy] posted to websites fromconnotea by maximilianh on 2007-09-23 12:59:07 as

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fromconnotea	411
motif	178
discovery	130
duplicates	59
scanning	57
enhancer	56
synteny	56
tandem	53
syntenypaper	52
enhancerprediction	43
molecularbiologytechniques	41
combination	36
cns-differences	34
cns	32
factors	32
geneorder	30
noalignment	28
cross-species-enhancer	28
wnt	26
review	24
ncrna	22
conserved	22
phylogenomics	21
phylogeny	20
chipchip	19
alignment	19
transcription	18
ultraconserved	17
promoter	17
repeated	16
rennes	16
notconserved	16
otx	15
cis-trans	15
pcr	14
whole	14
genome	14
enhancerpromotercompatibility	13
cluster	12
insulator	12
tools	12
pwm	11
disease	11
websites	11
randombreakage	10
pwmimprovement	10
cns-enhancer-screen	10
mirna	10
ciona	10
chromatin	10
cns-ranking	10
cns-collaboration	9
dna	9
promoters	8
pitx	8
genomicregulatoryblocks	8
genome-papers	8
3dstructure	8
cns-similarity	8
snp	7
pwmcomparison	7
application	7
conservation	7
genes	7
syntenytools	7
promoterprediction	7
genomeregulatoryblocks	7
position	6
long-range	6
enhanceosome	6
orthology	6
phenotype	6
textmining	6
enhancer-vertebrate-invertebrate	6
bidirectionalpromoters	6
redundancy	6
enhancer-screen	6
structure	5
similarity	5
expression	5
microrna	5
comparative	5
chipseq	5
validated	5
enhancerdistances	5
methylation	5
genecoregulation	5
enhancer-and-repeats	5
footprinting	4
enhancer-prediction	4
recognition	4
interaction	4
wholegenomescanning	4
enhancersharing	4
enhancerincodingregion	4
interchromosomal	4
otxpaper	4
silencer	4
antisensetranscription	4
energy_model	4
region	4
competition	4
comparison	4
introns	4
go	3
term_recognition	3
genometrees	3
copy-number-variation	3
encode	3
trainingset	3
tf	3
evoluation	3
inter-cns-distances	3
factorclass	3
composition	3
model-species	3
syntenyorientation	3
matrix	3
coding	3
myarticles	3
regions	3
mutations	3
phylotypicstage	3
mirnaenhancer	3
regulatory	3
cionapopulationgenetics	3
replicationorigins	3
rna-binding	3
ncrnas	3
promoter-minimal	3
thermodynamicalmodels	3
pluripotency	2
cns-database	2
binding	2
jshypotheses	2
ultraconserveddefinition	2
factorinteractions	2
grn	2
regulatory-flexibility	2
ciona-gene-annotation	2
spacing	2
coexpression	2
ncrna-long	2
strengthofmatch	2
cellsortingbasedanalysis	2
enhancer-stage-specificity	2
mammals	2
pvalue-multiplicity	2
pituitary	2
whyconserved	2
prediction	2
tfsynergy	2
drosophila	2
microarray	2
molecularbiologytools	2
histones	2
of	2
3putr	2
polymorphism	2
bullshitarticles	2
networks	2
codingconservation	2
core	2
site-prediction	2
assayscisregwetlab	2
rearrangement	2
genomiccontext	2
ascidians	2
protocols	2
doublets	1
books	1
genefamilyfootprinting	1
pax6	1
intra-primate	1
syntenypapers	1
olfactoryreceptors	1
fugu	1
decoy	1
fastindexing	1
enhancer-contextanalysis	1
hmm	1
nomotif	1
element	1
screening	1
gene_expression_databases	1
purificationfromdna	1
sites	1
dlx	1
writing	1
nucleosome	1
word	1
drosophia	1
genomeregulatoryblock	1
duplicatese	1
microarray-analysis	1
factorsclass	1
cns-enhancer	1
insertionsdeletions	1
positiveselection	1
kernel	1
primers	1
arx	1
autoregulation	1
igh	1
statistics	1
cell-cultures	1
suppressor	1
cns-enhance	1
generalregulation	1
ciona-gene-annotations	1
smarts	1
tr-reviews	1
transgenesis	1
impossible	1
genemodels	1
turnover	1
cns-difference	1
applicationbioinf	1
drosphila	1
noaccess	1
grns	1
cisregdatabase	1
phylogenytools	1
notconservedfunction	1
gibbs	1
bioinformatics	1
generegulatorynetworks	1
degeneratesites	1

maximilianh's websites [11 articles] Export

maximilianh's tags