michC's library 40 articles Export

	Origin of phenotypes: genes and transcripts. [My Copy] Genome research, Vol. 17, No. 6. (June 2007), pp. 682-690. by T. R. Gingeras posted to rna by michC on 2008-03-23 00:26:17 as along with 10 people and 4 groups inesdesantiago klo guhjy balicea xico dchughes ghattem Garamonfok Jporci bertelsen Bioinformatics WetBiology G4ID Genetics-of-Gambling
	Evolution of protein domain promiscuity in eukaryotes [My Copy] Genome Res. (29 January 2008), gr.6943508. by Malay K. Basu, Liran Carmel, Igor B. Rogozin, Eugene V. Koonin posted to no-tag by michC on 2008-02-11 22:17:43 as along with 10 people swp09 druvus kshameer saket cmzmasek neils grahamc zwang carlk dchughes
	Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi [My Copy] Genome Biology, Vol. 9, No. 1. (2008) by Nora Khaldi, Jerome Collemare, Marc H. Lebrun, Kenneth Wolfe posted to fungi hgt by michC on 2008-01-31 15:08:39 as along with 3 people and 1 group GustavoLacerda stajich biomcgary Mycology
	Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates [My Copy] Nature, Vol. 411, No. 6840. (21 June 2001), pp. 940-944. by Michael J. Stanhope, Andrei Lupas, Michael J. Italia, Kristin K. Koretke, Craig Volker, James R. Brown posted to phylogenetics by michC on 2008-01-23 21:17:26 as
	Quantitative assessment of protein function prediction from metagenomics shotgun sequences [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 35. (28 August 2007), pp. 13913-13918. by E. D. Harrington, A. H. Singh, T. Doerks, et al.I. Letunic, C. von Mering, L. J. Jensen, J. Raes, P. Bork posted to bork metagenomics by michC on 2007-09-17 21:23:26 as along with 3 people and 1 group skembel bluto larsjuhljensen iSEEM
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted to bioinformatics blast software by michC on 2007-09-17 21:16:08 as along with 72 people and 6 groups mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti ashaytan benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
	Quantitative phylogenetic assessment of microbial communities in diverse environments. [My Copy] Science (New York, N.Y.), Vol. 315, No. 5815. (23 February 2007), pp. 1126-1130. by C. von Mering, P. Hugenholtz, J. Raes, et al.S. G. Tringe, T. Doerks, L. J. Jensen, N. Ward, P. Bork posted to bork metagenomics tol by michC on 2007-09-17 17:27:18 as along with 18 people and 7 groups pkm michaelbarton idoerg sriesenfeld skembel kozo-ni ana nickluscombe bluto agg19954 TaqSys azazello Thaverkamp larsjuhljensen rvgomes mjetten jlgreen djkt structural_bioinformatics Bioinformatics EBI-regulation Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	Visualization of comparative genomic analyses by BLAST score ratio \| BioMed Central - Mirror @ Uni Potsdam [My Copy] posted to bioinformatics software by michC on 2007-07-18 22:20:47 as
	Community structure and metabolism through reconstruction of microbial genomes from the environment [My Copy] Nature, Vol. 428, No. 6978. (4 March 2004), pp. 37-43. by Gene W. Tyson, Jarrod Chapman, Philip Hugenholtz, et al.Eric E. Allen, Rachna J. Ram, Paul M. Richardson, Victor V. Solovyev, Edward M. Rubin, Daniel S. Rokhsar, Jillian F. Banfield posted to amd metagenomics by michC on 2007-07-18 20:06:07 as along with 7 people and 2 groups balajis eweaver mabedin azazello beatrizfernandez niallhaslam rvgomes Microbial-Ecology MBLAB
	Symbiosis insights through metagenomic analysis of a microbial consortium. [My Copy] Nature, Vol. 443, No. 7114. (26 October 2006), pp. 950-955. by Tanja Woyke, Hanno Teeling, Natalia N. Ivanova, et al.Marcel Huntemann, Michael Richter, Frank Oliver O. Gloeckner, Dario Boffelli, Iain J. Anderson, Kerrie W. Barry, Harris J. Shapiro, Ernest Szeto, Nikos C. Kyrpides, Marc Mussmann, Rudolf Amann, Claudia Bergin, Caroline Ruehland, Edward M. Rubin, Nicole Dubilier posted to metagenomics symbiosis by michC on 2007-07-16 18:06:02 as along with 5 people azazello idoerg bluto wenhan mcox
	The genome of Syntrophus aciditrophicus: Life at the thermodynamic limit of microbial growth [My Copy] PNAS, Vol. 104, No. 18. (1 May 2007), pp. 7600-7605. by Michael J. Mcinerney, Lars Rohlin, Housna Mouttaki, et al.Unmi Kim, Rebecca S. Krupp, Luis Rios-Hernandez, Jessica Sieber, Christopher G. Struchtemeyer, Anamitra Bhattacharyya, John W. Campbell, Robert P. Gunsalus posted to no-tag by michC on 2007-07-13 00:13:23 as
	Prediction of effective genome size in metagenomic samples [My Copy] Genome Biology, Vol. 8 (15 January 2007), R10. by Jeroen Raes, Jan O. Korbel, Martin J. Lercher, Christian von Mering, Peer Bork posted to bork metagenomics by michC on 2007-07-10 20:28:25 as along with 3 people and 1 group halinat idoerg yas T_lab
	TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (26 October 2004), 163. by Hanno Teeling, Jost Waldmann, Thierry Lombardot, Margarete Bauer, Frank Glockner posted to bioinformatics software tetra by michC on 2007-06-13 00:21:59 as along with 8 people and 1 group Thaverkamp idoerg azazello druvus jmeppley bluto wenhan werwiesel Bioinformatics
	Application of tetranucleotide frequencies for the assignment of genomic fragments [My Copy] Environmental Microbiology, Vol. 6, No. 9. (September 2004), pp. 938-947. by Hanno Teeling, Anke Meyerdierks, Margarete Bauer, Rudolf Amann, Frank O. Glöckner posted to aom bioinformatics metagenomics software tetra by michC on 2007-06-12 19:12:19 as along with 7 people dakelley Thaverkamp azazello druvus bluto george_g mcox
	Reconstruction of amino acid biosynthesis pathways from the complete genome sequence. [My Copy] Genome Res, Vol. 8, No. 3. (March 1998), pp. 203-210. by H. Bono, H. Ogata, S. Goto, M. Kanehisa posted to bioinformatics by michC on 2007-06-11 22:47:41 as along with 2 people and 2 groups shung ana structural_bioinformatics Bioinformatics
	The KEGG databases at GenomeNet [My Copy] Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 42-46. by Minoru Kanehisa, Susumu Goto, Shuichi Kawashima, Akihiro Nakaya posted to bioinformatics software by michC on 2007-06-11 19:46:05 as along with 3 people verdicchio opheliav dragonrez
	From genomics to chemical genomics: new developments in KEGG [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_1. (1 January 2006), pp. D354-357. by Minoru Kanehisa, Susumu Goto, Masahiro Hattori, et al.Kiyoko F. Aoki-Kinoshita, Masumi Itoh, Shuichi Kawashima, Toshiaki Katayama, Michihiro Araki, Mika Hirakawa posted to bioinformatics software by michC on 2007-06-11 19:06:39 as along with 17 people VGreiff AaronDarling srp33 namunet guhjy aalibes kuhn balajis alexg eweaver tny dullhunk frohike incovoma sgoetz yggdrasil natstreet
	A New Type of Sulfite Reductase, a Novel Coenzyme F420-dependent Enzyme, from the Methanarchaeon Methanocaldococcus jannaschii [My Copy] J. Biol. Chem., Vol. 280, No. 46. (18 November 2005), pp. 38776-38786. by Eric F. Johnson, Biswarup Mukhopadhyay posted to archaea s by michC on 2007-05-31 23:37:29 as
	Novel energy metabolism in anaerobic hyperthermophilic archaea: a modified Embden-Meyerhof pathway. [My Copy] J Biosci Bioeng, Vol. 93, No. 5. (2002), pp. 441-448. by H. Sakuraba, T. Ohshima posted to archaea metabolism by michC on 2007-05-31 23:35:17 as
	The nif Gene Operon of the Methanogenic Archaeon Methanococcus maripaludis [My Copy] J. Bacteriol., Vol. 180, No. 6. (15 March 1998), pp. 1504-1511. by Peter S. Kessler, Carrine Blank, John A. Leigh posted to methanogenesis n by michC on 2007-05-31 23:33:26 as
	Quantitative proteomic and microarray analysis of the archaeon Methanosarcina acetivorans grown with acetate versus methanol. [My Copy] J Proteome Res, Vol. 6, No. 2. (February 2007), pp. 759-771. by L. Li, Q. Li, L. Rohlin, et al.U. Kim, K. Salmon, T. Rejtar, R. P. Gunsalus, B. L. Karger, J. G. Ferry posted to metaproteomics methanogenesis by michC on 2007-05-31 23:31:50 as
	Versatile and open software for comparing large genomes. [My Copy] Genome Biol, Vol. 5, No. 2. (2004) by S. Kurtz, A. Phillippy, A. L. Delcher, et al.M. Smoot, M. Shumway, C. Antonescu, S. L. Salzberg posted to bioinformatics software by michC on 2007-05-29 18:46:16 as along with 9 people pachorip APRegier treangen natstreet druvus adelcher AaronDarling yoanjacquemin Neeperando
	BLATâThe BLAST-Like Alignment Tool [My Copy] Genome Research, Vol. 12, No. 4. (1 April 2002), pp. 656-664. by W. James Kent posted to bioinformatics software by michC on 2007-05-24 19:11:51 as along with 35 people and 3 groups dchughes rdowell gwallau druvus aprasad maria_hauser n00c sficklin Thaverkamp cpwardell daveGerrard coela daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen djkt timflutre olympos cjeans wenhan natstreet antonkratz yoanjacquemin talponer bozdagd gpappas LabDros BergmanLab EisenLab
	Structural and Functional Diversity of the Microbial Kinome. [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007) by Natarajan Kannan, Susan S S. Taylor, Yufeng Zhai, J Craig C. Venter, Gerard Manning posted to gos kinases metagenomics by michC on 2007-05-18 23:47:45 as along with 4 people idoerg jmeppley neils renatomilani
	Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract. [My Copy] Appl Environ Microbiol, Vol. 73, No. 4. (February 2007), pp. 1388-1392. by E. S. Klaassens, W. M. de Vos, E. E. Vaughan posted to gut metaproteomics by michC on 2007-05-18 23:36:24 as along with 7 people and 3 groups bluto dchughes azazello wenhan nitiniitk barberan mcox G4ID Genetics-of-Gambling MBLAB
	Obesity alters gut microbial ecology. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 31. (2 August 2005), pp. 11070-11075. by Ruth E. Ley, Fredrik Bäckhed, Peter Turnbaugh, Catherine A. Lozupone, Robin D. Knight, Jeffrey I. Gordon posted to 16s gut obesity by michC on 2007-05-18 18:51:41 as along with 4 people and 2 groups robertrentzsch sim82 Zephyrus marimo Orengo Group Journal Picks MathBio
	Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior [My Copy] Science, Vol. 311, No. 5760. (27 January 2006), pp. 496-503. by Edward F. Delong, Christina M. Preston, Tracy Mincer, et al.Virginia Rich, Steven J. Hallam, Niels-Ulrik Frigaard, Asuncion Martinez, Matthew B. Sullivan, Robert Edwards, Beltran R. Brito, Sallie W. Chisholm, David M. Karl posted to depth_continuum metagenomics ocean by michC on 2007-05-17 22:10:37 as along with 15 people and 5 groups hwright anphony Thaverkamp skembel eoghanharr dayjm jmeppley bluto jdelcampo beatrizfernandez mjetten mcox vrich jlgreen djkt Savage Lab, UCLA Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre [My Copy] Environmental Microbiology, Vol. 9, No. 5. (May 2007), pp. 1162-1175. by Mincer, J. Tracy, Church, et al.J. Matthew, Taylor, Lance Trent, Preston, Christina, Karl, M. David, Delong, F. Edward posted to n by michC on 2007-05-17 22:07:29 as along with 3 people and 2 groups jmeppley kinestetika vrich anammox microbiology_nijmegen
	The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e77. by Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, et al.Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff M. Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, J. Craig Venter posted to gos metagenomics by michC on 2007-05-16 21:04:18 as along with 17 people and 5 groups antonkratz dakelley maria_hauser mlangill AaronDarling azazello skembel aramata jmeppley kaspermunch jdelcampo stajich skoch3 beatrizfernandez kinestetika Thaverkamp djkt Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen iSEEM
	An obesity-associated gut microbiome with increased capacity for energy harvest. [My Copy] Nature, Vol. 444, No. 7122. (21 December 2006), pp. 1027-1031. by Peter J. Turnbaugh, Ruth E. Ley, Michael A. Mahowald, Vincent Magrini, Elaine R. Mardis, Jeffrey I. Gordon posted to gut metagenomics obesity by michC on 2007-05-16 19:59:27 as along with 8 people and 3 groups robertrentzsch Thaverkamp Zephyrus ana jmeppley srfairclough wenhan GX Orengo Group Journal Picks structural_bioinformatics Bioinformatics
	Metagenomic Analysis of the Human Distal Gut Microbiome [My Copy] Science, Vol. 312, No. 5778. (2 June 2006), pp. 1355-1359. by Steven R. Gill, Mihai Pop, Robert T. DeBoy, et al.Paul B. Eckburg, Peter J. Turnbaugh, Buck S. Samuel, Jeffrey I. Gordon, David A. Relman, Claire M. Fraser-Liggett, Karen E. Nelson posted to human_gut metagenomics by michC on 2007-05-16 19:55:40 as along with 22 people and 9 groups cmzmasek Thaverkamp jbhiatt windman83 Zephyrus vvoorr skembel Yanno ana dayjm jmeppley dchughes cmm neveaire hcmorton bluto azazello beatrizfernandez wenhan xingxu host-bacteria melissa_wos structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab G4ID Microbial-Ecology Genetics-of-Gambling
	Genomic Islands and the Ecology and Evolution of Prochlorococcus [My Copy] Science, Vol. 311, No. 5768. (24 March 2006), pp. 1768-1770. by Maureen L. Coleman, Matthew B. Sullivan, Adam C. Martiny, et al.Claudia Steglich, Kerrie Barry, Edward F. DeLong, Sallie W. Chisholm posted to hgt by michC on 2007-05-16 19:14:50 as along with 8 people and 4 groups hwright jmeppley Stenuite bluto jdelcampo cckan beatrizfernandez jlgreen African_Lakes_Limnology Microbial-Ecology Green Lab iSEEM
	PipMaker---A Web Server for Aligning Two Genomic DNA Sequences [My Copy] Genome Res., Vol. 10, No. 4. (1 April 2000), pp. 577-586. by Scott Schwartz, Zheng Zhang, Kelly A. Frazer, et al.Arian Smit, Cathy Riemer, John Bouck, Richard Gibbs, Ross Hardison, Webb Miller posted to bioinformatics software by michC on 2007-05-16 18:51:58 as along with 4 people Neeperando aprasad adijr wenhan
	The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families. [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007) by Shibu Yooseph, Granger Sutton, Douglas B B. Rusch, et al.Aaron L L. Halpern, Shannon J J. Williamson, Karin Remington, Jonathan A A. Eisen, Karla B B. Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S S. Miller, Huiying Li, Susan T T. Mashiyama, Marcin P P. Joachimiak, Christopher van Belle, John-Marc M. Chandonia, David A A. Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Lee, Benjamin J J. Raphael, Vineet Bafna, Robert Friedman, Steven E E. Brenner, Adam Godzik, David Eisenberg, Jack E E. Dixon, Susan S S. Taylor, Robert L L. Strausberg, Marvin Frazier, J Craig C. Venter posted to gos metagenomics protein_families by michC on 2007-05-09 22:36:52 as along with 9 people and 4 groups Thaverkamp skembel AaronDarling azazello jmeppley kaspermunch mjetten vrich jlgreen Bioinformatics microbiology_nijmegen Green Lab iSEEM
	A microbial consortium couples anaerobic methane oxidation to denitrification [My Copy] Nature, Vol. 440, No. 7086., pp. 918-921. by Ashna A. Raghoebarsing, Arjan Pol, Katinka T. van de Pas-Schoonen, et al.Alfons J. P. Smolders, Katharina F. Ettwig, Irene, Stefan Schouten, Jaap, Huub, Mike S. M. Jetten, Marc Strous posted to aom denitrification by michC on 2007-05-07 18:10:12 as along with 2 people and 2 groups cursonivel1 kinestetika microbiology_nijmegen cursonivel1
	New perspectives on anaerobic methane oxidation [My Copy] Environmental Microbiology, Vol. 2, No. 5. (2000), pp. 477-484. by David L. Valentine, William S. Reeburgh posted to aom by michC on 2007-05-01 21:06:22 as
	Methanogenesis: genes, genomes, and who's on first? [My Copy] J Bacteriol, Vol. 179, No. 19. (October 1997), pp. 5975-5986. by J. N. Reeve, J. Nölling, R. M. Morgan, D. R. Smith posted to methanogenesis by michC on 2007-05-01 21:01:46 as
	Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis [My Copy] Science, Vol. 293, No. 5529. (20 July 2001), pp. 484-487. by Victoria J. Orphan, Christopher H. House, Kai-Uwe Hinrichs, Kevin D. Mckeegan, Edward F. Delong posted to anme-2 aom eel_river_basin by michC on 2007-05-01 20:56:06 as along with 2 people jessec vrich
	Elucidation of methanogenic coenzyme biosyntheses: from spectroscopy to genomics. [My Copy] Natural Product Reports, Vol. 19, No. 2. (April 2002), pp. 133-147. by David E. Graham, Robert H. White posted to aom by michC on 2007-05-01 20:52:10 as
	The Genome of M. acetivorans Reveals Extensive Metabolic and Physiological Diversity [My Copy] Genome Res., Vol. 12, No. 4. (1 April 2002), pp. 532-542. by James E. Galagan, Chad Nusbaum, Alice Roy, et al.Matthew G. Endrizzi, Pendexter Macdonald, Will Fitzhugh, Sarah Calvo, Reinhard Engels, Serge Smirnov, Deven Atnoor, Adam Brown, Nicole Allen, Jerome Naylor, Nicole Stange-Thomann, Kurt Dearellano, Robin Johnson, Lauren Linton, Paul Mcewan, Kevin Mckernan, Jessica Talamas, Andrea Tirrell, Wenjuan Ye, Andrew Zimmer, Robert D. Barber, Isaac Cann, David E. Graham, David A. Grahame, Adam M. Guss, Reiner Hedderich, Cheryl Ingram-Smith, Craig H. Kuettner, Joseph A. Krzycki, John A. Leigh, Weixi Li, Jinfeng Liu, Biswarup Mukhopadhyay, John N. Reeve, Kerry Smith, Timothy A. Springer, Lowell A. Umayam, Owen White, Robert H. White, Everly C. de Macario, James G. Ferry, Ken F. Jarrell, Hua Jing, Alberto J. Macario, Ian Paulsen, Matthew Pritchett, Kevin R. Sowers, Ronald V. Swanson, Steven H. Zinder, Eric Lander, William W. Metcalf, Bruce Birren posted to aom by michC on 2007-05-01 20:39:39 as along with 2 people wimufi treangen

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metagenomics	12
bioinformatics	10
software	9
aom	6
bork	3
gos	3
gut	3
methanogenesis	3
archaea	2
hgt	2
metaproteomics	2
n	2
obesity	2
tetra	2
16s	1
amd	1
anme-2	1
blast	1
denitrification	1
depth_continuum	1
eel_river_basin	1
fungi	1
human_gut	1
kinases	1
metabolism	1
ocean	1
phylogenetics	1
protein_families	1
rna	1
s	1
symbiosis	1
tol	1

michC's library 40 articles Export

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