michaelbarton's mdb-manuscript-1 [46 articles] Export

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	http://www.mcisb.org/ [My Copy] by The Manchester Centre For Integrative Systems Biology posted to mdb-manuscript-1 by michaelbarton on 2009-10-06 14:42:16 as
	Conservation of the metabolomic response to starvation across two divergent microbes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 51. (19 December 2006), pp. 19302-19307. by Matthew J. Brauer, Jie Yuan, Bryson D. Bennett, et al.Wenyun Lu, Elizabeth Kimball, David Botstein, Joshua D. Rabinowitz posted to metabolite metabolism mdb-manuscript-1 by michaelbarton on 2009-10-06 12:26:21 as along with 1 person fishtank
	A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. [My Copy] Molecular Biology and Evolution, Vol. 18, No. 5. (1 May 2001), pp. 691-699. by S. Whelan, N. Goldman posted to mdb-thesis mdb-manuscript-1 evolutionary-rate amino-acid-substitution by michaelbarton on 2009-08-07 16:36:02 as along with 7 people calderonv BioNica bpb chrn ssgong gjuggler gisle
	Amino acid difference formula to help explain protein evolution. [My Copy] Science (New York, N.Y.), Vol. 185, No. 4154. (6 September 1974), pp. 862-864. by R. Grantham posted to mdb-manuscript-1 amino-acid-usage amino-acid-substitution by michaelbarton on 2009-07-23 10:13:08 as along with 4 people and 1 group thegoose2 tharris Iden-J_GluR gisle C. elegans / WormBase
	Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models. [My Copy] Nucleic Acids Research, Vol. 31, No. 8. (15 April 2003), pp. 2242-2251. by R. Jansen, H. J. Bussemaker, M. Gerstein posted to yeast mdb-thesis mdb-manuscript-1 gene-expression codon-usage by michaelbarton on 2009-07-19 19:35:03 as along with 1 person nedwards
	Gene Ontology annotations at SGD: new data sources and annotation methods. [My Copy] Nucleic Acids Research, Vol. 36, No. Database. (23 December 2008), pp. D577-D581. by E. L. Hong, R. Balakrishnan, Q. Dong, et al.K. R. Christie, J. Park, G. Binkley, M. C. Costanzo, S. S. Dwight, S. R. Engel, D. G. Fisk, J. E. Hirschman, B. C. Hitz, C. J. Krieger, M. S. Livstone, S. R. Miyasato, R. S. Nash, R. Oughtred, M. S. Skrzypek, S. Weng, E. D. Wong, K. K. Zhu, K. Dolinski, D. Botstein, J. M. Cherry posted to yeast mdb-thesis mdb-manuscript-1 database by michaelbarton on 2009-06-24 15:52:35 as along with 5 people fgibson taroleo dullhunk hplatero carlk
	Coding-sequence determinants of gene expression in Escherichia coli [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 255-258. by Grzegorz Kudla, Andrew W. Murray, David Tollervey, Joshua B. Plotkin posted to rna-structure protein-production mdb-manuscript-1 gene-expression gc-content ecoli codon-usage by michaelbarton on 2009-04-22 10:15:15 as along with 33 people and 1 group codonusage balabu yyfwuhan dbikard kinestetika samgj dswan bpcusack emptyhb sameersoi dpsuslo8 anwazo Vincent_Rouilly kintoki erel10 fenghezi VGreiff ramanuja austin twatanab coela polivares rpatward lizbiogen jdbowes operon jasontsai absterga jbhiatt jjray kshundyak zwang friendpine BergmanLab
	Selection on synthesis cost affects interprotein amino acid usage in all three domains of life [My Copy] Journal of Molecular Evolution, Vol. 64, No. 5. (6 May 2007), pp. 558-571. by Jonathan Swire posted to mdb-thesis mdb-manuscript-1 amino-acid-usage amino-acid-cost by michaelbarton on 2009-03-04 18:05:26 as along with 1 person youdon
	A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 2. (22 January 2003), pp. 185-193. by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed posted to statistics normalisation mdb-thesis mdb-manuscript-1 by michaelbarton on 2009-03-04 17:58:38 as along with 22 people jperkins vplagnol brianb neils ipark-kaist shikin emptyhb noushin huiminC cassj Dax42 pcahan1 chad_davis RMGraze gjuggler filmsternchen qmwwallace joepickrell ghattem bertelsen vertikalist GeeSharpMinor
	R: A Language and Environment for Statistical Computing [My Copy] by R Development Core Team posted to statistics software mdb-thesis mdb-manuscript-1 by michaelbarton on 2009-03-04 17:54:52 as along with 5 people asmusolsen bertelsen humburg kohei-h thegoose
	PAML 4: Phylogenetic analysis by maximum likelihood [My Copy] Molecular Biology and Evolution, Vol. 24, No. 8. (1 August 2007), pp. 1586-1591. by Ziheng Yang posted to mdb-thesis mdb-manuscript-1 evolutionary-rate by michaelbarton on 2009-03-02 22:52:02 as along with 13 people and 1 group ckenaley biomcgary dquest druvus operon akifumi hdopazo BioNica stajich ryanraaum RamuAnandakrishnan CharlesM Ema Mycology
	Regulatory on/off minimization of metabolic flux changes after genetic perturbations. [My Copy] Proceedings of the National Academy of Sciences, Vol. 102, No. 21. (24 May 2005), pp. 7695-7700. by T. Shlomi, O. Berkman, E. Ruppin posted to suboptimal-solution mdb-thesis mdb-manuscript-1 genome-scale-model flux-balance-analysis by michaelbarton on 2009-02-03 16:12:19 as along with 3 people yujiangwang koller roys
	Variation among species in proteomic sulphur content is related to environmental conditions. [My Copy] Proceedings of the Royal Society B, Vol. 273, No. 1591. (22 May 2006), pp. 1293-1300. by J. G. Bragg, D. Thomas, P. Baudouin-Cornu posted to nutrient-limitation mdb-thesis mdb-manuscript-1 gene-characteristics atomic-content amino-acid-usage by michaelbarton on 2009-02-03 15:35:22 as
	Amino acid cost and codon-usage biases in 6 prokaryotic genomes: a whole-genome analysis [My Copy] Molecular Biology and Evolution, Vol. 23, No. 9. (1 September 2006), pp. 1670-1680. by Esley M. Heizer, Douglas W. Raiford, Michael L. Raymer, Travis E. Doom, Robert V. Miller, Dan E. Krane posted to mdb-thesis mdb-manuscript-1 gene-characteristics cost-minimisation amino-acid-usage by michaelbarton on 2009-02-03 15:33:06 as along with 4 people codonusage operon dylan77 bpcusack
	Metabolic systems cost-benefit analysis for interpreting network structure and regulation. [My Copy] Bioinformatics (7 March 2007) by Ross P P. Carlson posted to mdb-thesis mdb-manuscript-1 genome-scale-model flux-balance-analysis cost-minimisation by michaelbarton on 2009-01-29 19:06:08 as along with 1 person aswin
	Molecular evolution of protein atomic composition [My Copy] Science, Vol. 293, No. 5528. (13 July 2001), pp. 297-300. by Peggy Baudouin-Cornu, Yolande Surdin-Kerjan, Philippe Marliere, Dominique Thomas posted to proteins protein-structure protein-atomic-content nutrient-limitation metabolism mdb-thesis mdb-manuscript-1 evolution environment cost-minimisation amino-acid-usage by michaelbarton on 2009-01-29 18:43:46 as
	An analysis of determinants of amino acids substitution rates in bacterial proteins. [My Copy] Molecular Biology and Evolution, Vol. 21, No. 1. (January 2004), pp. 108-116. by E. P. Rocha, A. Danchin posted to mdb-thesis mdb-manuscript-1 evolutionary-rate evolution ecoli cost-minimisation amino-acid-usage amino-acid-substitution by michaelbarton on 2009-01-29 17:15:51 as along with 5 people and 1 group bjorns tny penka jpoyatos skumagai Nie
	Do amino acid biosynthetic costs constrain protein evolution in Saccharomyces cerevisiae? [My Copy] Journal of Molecular Evolution (21 October 2008), pp. 621-630. by Douglas W. Raiford, Esley M. Heizer, Robert V. Miller, Hiroshi Akashi, Michael L. Raymer, Dan E. Krane posted to yeast translation transcription mdb-thesis mdb-manuscript-1 gene-expression evolutionary-rate amino-acid-usage amino-acid-cost by michaelbarton on 2009-01-16 16:49:34 as along with 1 group BergmanLab
	A new look at the statistical model identification [My Copy] Automatic Control, IEEE Transactions on, Vol. 19, No. 6. (06 January 2003), pp. 716-723. by H. Akaike posted to model-fitting mdb-thesis mdb-manuscript-1 log-likelihood akaike-information-criterion by michaelbarton on 2008-12-30 13:04:54 as along with 17 people and 4 groups anitabanerji Borelli sbarthelme TLVincent filippone bennett_tg fabiobayer gwenknight tvdbulck jford ppeeling tyler abrentnall cursonivel1 ntvandehey stefanoallesina durduran Forest inventory and monitoring QFRMC_ConsumerCredit cursonivel1 Wisconsin PET
	Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs. [My Copy] Journal of Molecular Biology, Vol. 158, No. 4. (15 July 1982), pp. 573-597. by T. Ikemura posted to yeast mdb-thesis mdb-manuscript-1 ecoli codon-usage by michaelbarton on 2008-12-30 13:00:49 as along with 3 people and 1 group danatcaret bjorns cisevol BergmanLab
	Growth control of the eukaryote cell: a systems biology study in yeast. [My Copy] Journal of Biology, Vol. 6, No. 2. (30 April 2007), 4. by Juan I. Castrillo, Leo A. Zeef, David C. Hoyle, et al.Nianshu Zhang, Andrew Hayes, David C. Gardner, Michael J. Cornell, June Petty, Luke Hakes, Leanne Wardleworth, Bharat Rash, Marie Brown, Warwick B. Dunn, David Broadhurst, Kerry O'Donoghue, Svenja S. Hester, Tom P. Dunkley, Sarah R. Hart, Neil Swainston, Peter Li, Simon J. Gaskell, Norman W. Paton, Kathryn S. Lilley, Douglas B. Kell, Stephen G. Oliver posted to yeast translation transcriptome transcription proteome metabolome mdb-thesis mdb-manuscript-1 by michaelbarton on 2008-12-30 12:54:53 as along with 13 people and 1 group cgaugain mqbphcw3 schwartzjmc neilswainston aalibes alexg dullhunk balabu dylan77 cabbagezs Stew roys alanrw EisenLab
	lpsolve : Open source (Mixed-Integer) Linear Programming system [My Copy] by Michel Berkelaar, Kjell Eikland, Peter Notebaert posted to software mdb-thesis mdb-manuscript-1 linear-optimisation by michaelbarton on 2008-12-19 18:14:21 as along with 1 person francolq
	Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox. [My Copy] Nature Protocols, Vol. 2, No. 3. (2007), pp. 727-738. by S. A. Becker, A. M. Feist, M. L. Mo, G. Hannum, Palsson, M. J. Herrgard posted to mdb-thesis mdb-manuscript-1 flux-balance-analysis by michaelbarton on 2008-12-19 18:06:19 as along with 6 people eline_koers yujiangwang lflorez guhjy alexg edwardmorrissey
	An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). [My Copy] Genome Biology, Vol. 4, No. 9. (2003), R54. by Jennifer L. Reed, Thuy D. Vo, Christophe H. Schilling, Bernhard O. Palsson posted to systems-biology metabolism mdb-thesis mdb-manuscript-1 genome-scale-model flux-balance-analysis ecoli by michaelbarton on 2008-12-19 18:01:13 as along with 5 people and 2 groups schwartzjmc csanford cate bjorns JeremyZucker biospec MetabolicModeling
	Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network. [My Copy] Proceedings of the National Academy of Sciences, Vol. 100, No. 23. (11 November 2003), pp. 13134-13139. by I. Famili, J. Förster, J. Nielsen, B. O. Palsson posted to yeast systems-biology metabolism mdb-thesis mdb-manuscript-1 genome-scale-model flux-balance-analysis diauxic-shift by michaelbarton on 2008-12-12 15:01:29 as along with 2 people JeremyZucker koller
	Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model. [My Copy] Genome Research, Vol. 14, No. 7. (July 2004), pp. 1298-1309. by N. C. Duarte, M. J. Herrgård, B. O. Palsson posted to yeast mdb-thesis mdb-manuscript-1 genomics genome-scale-model flux-balance-analysis by michaelbarton on 2008-12-11 14:55:10 as along with 3 people RMGraze edwardmorrissey westoll
	Analysis of optimality in natural and perturbed metabolic networks. [My Copy] Proceedings of the National Academy of Sciences, Vol. 99, No. 23. (12 November 2002), pp. 15112-15117. by D. Segrè, D. Vitkup, G. M. Church posted to moma mdb-thesis mdb-manuscript-1 gene-dispensability flux-balance-analysis by michaelbarton on 2008-10-30 17:51:01 as along with 8 people rklancer nirfriedman koller gcalda kdang roys carlk JeremyZucker
	Genome-scale analysis of the uses of the Escherichia coli genome: model-driven analysis of heterogeneous data sets. [My Copy] Journal of bacteriology, Vol. 185, No. 21. (November 2003), pp. 6392-6399. by T. E. Allen, M. J. Herrgård, M. Liu, et al.Y. Qiu, J. D. Glasner, F. R. Blattner, Palsson posted to translation transcription systems-biology ribosomal reviewed promoters nutrient-limitation mrn-degradation metabolism mdb-thesis mdb-manuscript-1 gene-length gene-expression-degradation gene-expression flux-balance-analysis energy-production ecoli density cost-benefit-analysis amino-acid-usage by michaelbarton on 2008-10-17 14:55:43 as
	Selection costs of amino acid substitutions in ColE1 and ColIa gene clusters harbored by Escherichia coli. [My Copy] Molecular Biology and Evolution, Vol. 15, No. 6. (June 1998), pp. 774-776. by C. L. Craig, R. S. Weber posted to mdb-thesis mdb-manuscript-1 cost-minimisation amino-acid-usage by michaelbarton on 2008-10-10 14:50:09 as
	Cost-minimization of amino acid usage [My Copy] Journal of Molecular Evolution, Vol. 56, No. 2. (1 February 2003), pp. 151-161. by Hervé Seligmann posted to mdb-thesis mdb-manuscript-1 cost-minimisation amino-acid-usage amino-acid-cost by michaelbarton on 2008-10-10 14:46:56 as along with 1 person Ema
	Energy constraints on the evolution of gene expression [My Copy] Mol Biol Evol, Vol. 22, No. 6. (1 June 2005), pp. 1365-1374. by Andreas Wagner posted to mdb-thesis mdb-manuscript-1 cost-minimisation amino-acid-usage by michaelbarton on 2008-10-10 14:46:26 as along with 4 people operon jjray jknabe Ema
	Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis. [My Copy] Proceedings of the National Academy of Sciences, Vol. 99, No. 6. (19 March 2002), pp. 3695-3700. by H. Akashi, T. Gojobori posted to mdb-thesis mdb-manuscript-1 evolution energy-production ecoli cost-minimisation codon-usage amino-acid-usage by michaelbarton on 2008-10-10 10:50:38 as along with 4 people and 1 group bpcusack kinestetika bjorns tny microbiology_nijmegen
	Understanding the Control of Metabolism [My Copy] (01 November 1996) by David Fell posted to metabolism metabolic-control-analysis mdb-thesis mdb-manuscript-1 by michaelbarton on 2008-08-29 15:45:28 as along with 1 person Borelli
	Integrated analysis of metabolic phenotypes in Saccharomyces cerevisiae. [My Copy] BMC Genomics, Vol. 5, No. 1. (8 September 2004) by N. C. Duarte, Palsson, P. Fu posted to yeast mdb-manuscript-1 genome-scale-model flux-balance-analysis by michaelbarton on 2008-08-29 15:35:01 as along with 1 person and 1 group JeremyZucker MetabolicModeling
	Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli [My Copy] Molecular Systems Biology, Vol. 3 (10 July 2007) by Robert Schuetz, Lars Kuepfer, Uwe Sauer posted to mdb-manuscript-1 by michaelbarton on 2008-07-11 12:29:41 as along with 7 people and 1 group yyfwuhan agomez dullhunk alexg fishtank zwang Ema Bioinformatics
	A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information [My Copy] Molecular Systems Biology, Vol. 3 (26 June 2007), 121. by Adam M. Feist, Christopher S. Henry, Jennifer L. Reed, et al.Markus Krummenacker, Andrew R. Joyce, Peter D. Karp, Linda J. Broadbelt, Vassily Hatzimanikatis, Bernhard O. Palsson posted to mdb-thesis mdb-manuscript-1 genome-scale-model by michaelbarton on 2008-07-11 12:27:00 as along with 7 people winterstream aheilbut schwartzjmc alexg cjeans hryk JeremyZucker
	Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states. [My Copy] Genome Res, Vol. 14, No. 9. (September 2004), pp. 1797-1805. by J. L. Reed, Palsson posted to mdb-manuscript-1 by michaelbarton on 2008-07-10 18:19:37 as along with 3 people yujiangwang comb lylu
	Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates. [My Copy] Applied Environmental Microbiology, Vol. 59, No. 8. (August 1993), pp. 2465-2473. by A. Varma, B. W. Boesch, B. O. Palsson posted to shadow-prices reviewed metabolism mdb-thesis mdb-manuscript-1 glycolysis genome-scale-model flux-balance-analysis energy-production ecoli diauxic-shift cost-minimisation by michaelbarton on 2008-06-17 11:19:02 as along with 1 person madhadron
	Evidence of selection for low cognate amino acid bias in amino acid biosynthetic enzymes [My Copy] Molecular Microbiology, Vol. 56, No. 4. (May 2005), pp. 1017-1034. by Rui Alves, Michael A. Savageau posted to mdb-manuscript-1 amino-acid-usage by michaelbarton on 2008-06-17 10:22:32 as
	Adaptive eradication of methionine and cysteine from cyanobacterial light-harvesting proteins. [My Copy] Nature, Vol. 341, No. 6239. (21 September 1989), pp. 245-248. by D. Mazel, P. Marlière posted to nutrient-limitation mdb-thesis mdb-manuscript-1 atomic-content amino-acid-usage by michaelbarton on 2008-06-17 10:20:34 as
	Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures. [My Copy] Mol Biol Cell, Vol. 16, No. 5. (May 2005), pp. 2503-2517. by M. J. Brauer, A. J. Saldanha, K. Dolinski, D. Botstein posted to yeast mdb-manuscript-1 gene-expression diauxic-shift by michaelbarton on 2008-04-22 13:39:59 as along with 1 person dbenn
	Functional genomic analysis of the rates of protein evolution. [My Copy] Proceedings of the National Academy of Sciences, Vol. 102, No. 15. (12 April 2005), pp. 5483-5488. by D. P. Wall, A. E. Hirsh, H. B. Fraser, et al.J. Kumm, G. Giaever, M. B. Eisen, M. W. Feldman posted to yeast synonymous-substitutions reviewed non-synonymous-substitutions noise mdb-thesis mdb-manuscript-1 gene-knockout gene-expression gene-dispensability evolutionary-rate evolution amino-acid-substitution by michaelbarton on 2008-04-22 12:32:12 as along with 7 people and 1 group mgomes phoenixzxl bjorns balajis opheliav penka RamuAnandakrishnan Nie
	Exploring the metabolic and genetic control of gene expression on a genomic scale. [My Copy] Science, Vol. 278, No. 5338. (24 October 1997), pp. 680-686. by J. L. DeRisi, V. R. Iyer, P. O. Brown posted to yeast mdb-manuscript-1 gene-expression diauxic-shift by michaelbarton on 2008-04-14 10:33:42 as along with 8 people and 3 groups thomaskelder macowell lfriedl lyongu fisherp raiyar incovoma dbenn kdl BUiGEM steinmetzlab
	Global analysis of protein expression in yeast [My Copy] Nature, Vol. 425, No. 6959. (16 October 2003), pp. 737-741. by Sina Ghaemmaghami, Won-Ki Huh, Kiowa Bower, et al.Russell W. Howson, Archana Belle, Noah Dephoure, Erin K. O'Shea, Jonathan S. Weissman posted to yeast translation tap-tag reviewed proteins mdb-thesis mdb-manuscript-1 gene-expression codon-usage by michaelbarton on 2008-04-01 16:51:51 as along with 14 people viren4388 phebden jporternj nzm MarcJungbluth rebeccahainess nirfriedman nm raiyar nicoleq roys faion dylanwalker chasmand
	Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae [My Copy] Journal of Molecular Biology, Vol. 268, No. 2. (2 May 1997), pp. 322-330. by Riccardo Percudani, Angelo Pavesi, Simone Ottonello posted to yeast trna-copy trna translational-selection translational-accuracy reviewed mdb-manuscript-1 genetic-code gene-expression gene-characteristics codon-usage amino-acid-usage by michaelbarton on 2008-03-31 11:38:04 as
	Translational selection and yeast proteome evolution. [My Copy] Genetics, Vol. 164, No. 4. (August 2003), pp. 1291-1303. by H. Akashi posted to yeast trna-copy trna translational-selection reviewed mdb-thesis mdb-manuscript-1 gene-length gene-expression gene-characteristics codon-usage amino-acid-usage by michaelbarton on 2008-03-10 11:52:39 as along with 2 people and 1 group bjorns penka Nie

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mdb-thesis	112
yeast	65
amino-acid-usage	50
mdb-manuscript-1	46
gene-expression	38
flux-balance-analysis	34
genome-scale-model	34
evolutionary-rate	29
evolution	25
cost-minimisation	24
codon-usage	23
reviewed	21
ecoli	20
gene-dispensability	20
metabolism	20
srs	17
systems-biology	15
amino-acid-substitution	13
environment	13
gene-characteristics	10
metabolic-control-analysis	10
metagenomics	10
nutrient-limitation	10
translation	10
diauxic-shift	8
genomics	8
gc-content	7
gene-duplication	7
transcription	7
evolutionary-systems-biology	6
phylogenomics	6
srs-resequencing	6
statistics	6
amino-acid-cost	5
atomic-content	5
comparative-genomics	5
fitness	5
gene-length	5
genome-annotation	5
genome-sequencing	5
glycolysis	5
haploinsufficiency	5
mutation	5
prote-evolution	5
srs-assembly	5
translational-selection	5
database	4
energy-production	4
extremophile	4
insertion-deletion	4
proteins	4
sequence-alignment	4
snp	4
thermophile	4
trna	4
cost-benefit-analysis	3
enzyme	3
gene-expression-degradation	3
metabolomics	3
pharmacology	3
phylogeny	3
population-genetics	3
protein-structure	3
sequence-homology	3
trna-copy	3
alignment-concatenation	2
classification	2
clustering	2
data-mining	2
drosophila	2
gene-knockout	2
genetic-code	2
genetic-variation	2
gene-transfer	2
genome-scale-model-construction	2
kinetic-modelling	2
model-fitting	2
moma	2
mrna-degradation	2
multiple-sequence-alignment	2
noise	2
non-synonymous-substitutions	2
proteome	2
regulation	2
software	2
srs-challenges	2
standards	2
suboptimal-solution	2
synonymous-substitutions	2
transcription-factors	2
transcriptome	2
translational-accuracy	2
akaike-information-criterion	1
alignment	1
bibliometrics	1
binding-sites	1
bioruby	1
bloggging	1
blogging	1
buchnera	1
chemicals	1
citation-analysis	1
collaboration	1
density	1
drug	1
endosymbiotic	1
eubacteria	1
functional-constaint	1
functional-constraint	1
gene-prediction	1
genome-annoation	1
genome-duplication	1
hiv	1
insertions-deletions	1
instance-rate-matrix	1
isoenzymes	1
lac-operon	1
lactose	1
linear-optimisation	1
log-likelihood	1
metabolic_efficiency	1
metabolic-engineering	1
metabolite	1
metabolome	1
microarray	1
modelling	1
mrna-stability	1
mrn-degradation	1
multivariate	1
network-analysis	1
non-coding-dna	1
normalisation	1
ontology	1
open-science	1
page-rank	1
paralogs	1
paramter-scanning	1
phenotype-prediction	1
promoters	1
protein-atomic-content	1
protein-degradation	1
protein-production	1
purifying-selection	1
regression	1
research	1
review	1
ribosomal	1
ribosomal-density	1
rna-structure	1
room	1
ruby	1
sequence	1
shadow-prices	1
solexa	1
species-tree	1
srs-deep	1
srs-simulation	1
strain-design	1
structural-constraint	1
sulfur	1
symbiosis	1
tap-tag	1
thermophiles	1
tiling-array	1
trace-metals	1
transcription-network	1
transposable-elements	1
virus	1

michaelbarton's mdb-manuscript-1 [46 articles] Export

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