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	BioNetBuilder2.0: bringing systems biology to chicken and other model organisms. [My Copy] BMC genomics, Vol. 10 Suppl 2 (2009) by Jay H. Konieczka, Kevin Drew, Alex Pine, et al.Kevin Belasco, Sean Davey, Tatiana A. Yatskievych, Richard Bonneau, Parker B. Antin posted to systems-biology cytoscape by guhjy on 2009-11-26 06:10:30 as
	Traversing the conceptual divide between biological and statistical epistasis: systems biology and a more modern synthesis [My Copy] BioEssays, Vol. 27, No. 6. (2005), pp. 637-646. by Jason H. Moore, Scott M. Williams posted to systems-biology pleiotropy modelling epistasis by tomhebbron on 2009-11-25 14:06:10 as
	Synthetic biology: Engineering Escherichia coli to see light [My Copy] Nature, Vol. 438, No. 7067. (24 November 2005), pp. 441-442. by Anselm Levskaya, Aaron A. Chevalier, Jeffrey J. Tabor, et al.Zachary B. Simpson, Laura A. Lavery, Matthew Levy, Eric A. Davidson, Alexander Scouras, Andrew D. Ellington, Edward M. Marcotte, Christopher A. Voigt posted to transduction synthetic_biology light escherichia_coli by dbikard to the group Synthetic Biology on 2009-11-25 08:52:28 as along with 4 people and 2 groups abhishek_tiwari ClaireFB marcius dansullivanblk BioinfoCIPF SGU-CIPF
	The Edinburgh human metabolic network reconstruction and its functional analysis. [My Copy] Molecular systems biology, Vol. 3 (2007) by H. Ma, A. Sorokin, A. Mazein, et al.A. Selkov, E. Selkov, O. Demin, I. Goryanin posted to systems_biology metabolic_reconstruction metabolic_pathways human_metabolism edinburgh bow_tie by JeremyZucker on 2009-11-25 00:00:50 as along with 10 people vpenelle peterli schwartzjmc Garamonfok dullhunk grahamc fishtank cjeans shung mdstobbe
	Next Generation Simulation Tools: The Systems Biology Workbench and BioSPICE Integration [My Copy] OMICS: A Journal of Integrative Biology, Vol. 7, No. 4. (December 2003), pp. 355-372. by Herbert M. Sauro, Michael Hucka, Andrew Finney, et al.Cameron Wellock, Hamid Bolouri, John Doyle, Hiroaki Kitano posted to systems_biology by jonathancooper on 2009-11-24 17:20:05 as along with 2 people and 1 group dagmar bootsy compneur
	Systems biology and the virtual physiological human. [My Copy] Molecular systems biology, Vol. 5 (28 July 2009) by Peter Kohl, Denis Noble posted to vph systems_biology by jonathancooper on 2009-11-24 11:40:43 as along with 3 people and 1 group qayub roys reyez Journal picks
	Design Principles for Riboswitch Function [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (17 April 2009), e1000363. by Chase L. Beisel, Christina D. Smolke posted to synthetic_biology rna riboswitch gene_regulation expression by pmalkus on 2009-11-24 01:07:44 as along with 6 people leemond31 austin swapanjain boko4ikameto erel10 reyez
	Bifurcation analysis of a model of the budding yeast cell cycle [My Copy] Chaos: An Interdisciplinary Journal of Nonlinear Science, Vol. 14, No. 3. (2004), pp. 653-661. by Dorjsuren Battogtokh, John J. Tyson posted to systems_biology cell_cycle by pjmaybank on 2009-11-23 17:33:01 as
	A High-Throughput Screen for Synthetic Riboswitches Reveals Mechanistic Insights into Their Function [My Copy] Chemistry & Biology, Vol. 14, No. 2. (February 2007), pp. 173-184. by Sean A. Lynch, Shawn K. Desai, Hari K. Sajja, Justin P. Gallivan posted to synthetic_biology screening riboswitches riboswitch design by Vincent_Rouilly on 2009-11-23 16:53:08 as
	Computational methods for discovering gene networks from expression data [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 408-423. by Wei-Po Lee, Wen-Shyong Tzou posted to review regulation gene_networks by jfr on 2009-11-23 14:23:16 as along with 9 people and 1 group jperkins sotacam GustavoLacerda gotgenes ruichu antonkratz renatomilani lp2 TRHvidsten Orengo Group Journal Picks
	Construction of a genetic toggle switch in Escherichia coli [My Copy] Nature, Vol. 403, No. 6767. (20 January 2000), pp. 339-342. by Timothy S. Gardner, Charles R. Cantor, James J. Collins posted to synthetic_biology switch by dbikard on 2009-11-23 14:05:40 as along with 12 people genocad sjayanthi marcio rdowell reidw Borelli ClaireFB lenov rklancer satsumakenji tvdbulck austin
	Systems biology in the cell nucleus. [My Copy] Journal of cell science, Vol. 118, No. Pt 18. (15 September 2005), pp. 4083-4092. by Stanislaw Gorski, Tom Misteli posted to systems_biology by karthikraman on 2009-11-23 12:19:20 as along with 2 people and 1 group singhsh karthikram Neoscientists
	Quantitative analysis of a molecular model of mitotic control in fission yeast [My Copy] Journal of Theoretical Biology, Vol. 173, No. 3. (07 April 1995), pp. 283-305. by B. Novak, J. Tyson posted to systems_biology cell_cycle by pjmaybank on 2009-11-23 10:04:27 as
	Explosive Percolation in the Human Protein Homology Network [My Copy] (20 Nov 2009) by Hernán D. Rozenfeld, Lazaros K. Gallos, Hernán A. Makse posted to preprint percolation networks explosive_percolation biological_networks by davidecellai on 2009-11-23 08:44:40 as along with 1 person deanmalmgren
	Automated design of synthetic ribosome binding sites to control protein expression. [My Copy] Nature biotechnology, Vol. 27, No. 10. (04 October 2009), pp. 946-950. by Howard M. Salis, Ethan A. Mirsky, Christopher A. Voigt posted to fresh synthetic_biology by pmalkus on 2009-11-20 20:50:10 as along with 4 people and 1 group johntheap mhamidi dbikard michaelbarton BergmanLab
	FACS-optimized mutants of the green fluorescent protein (GFP). [My Copy] Gene, Vol. 173, No. 1 Spec No. (1996), pp. 33-38. by B. P. Cormack, R. H. Valdivia, S. Falkow posted to synthetic_biology reporter_gene genetic_parts fluorescent_protein escherichia_coli by genocad on 2009-11-20 18:50:16 as along with 1 person davidng
	Is the amino acid but not the nucleotide sequence of the Escherichia coli araC gene conserved? [My Copy] Journal of molecular biology, Vol. 154, No. 4. (5 February 1982), pp. 649-652. by C. M. Stoner, R. Schleif posted to synthetic_biology genetic_parts escherichia_coli by genocad on 2009-11-20 18:33:32 as
	Nucleotide sequence of the luxR and luxI genes and structure of the primary regulatory region of the lux regulon of Vibrio fischeri ATCC 7744 [My Copy] Biochemistry, Vol. 27, No. 2. (1 January 1988), pp. 837-842. by Jerry H. Devine, Cari Countryman, Thomas O. Baldwin posted to synthetic_biology quorum_sensing genetic_parts by genocad on 2009-11-20 18:06:40 as
	Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli [My Copy] BMC Molecular Biology, Vol. 4, No. 1. (2003), 11. by Kenan Murphy, Kenneth Campellone posted to synthetic_biology genocad genetic_parts escherichia_coli by genocad on 2009-11-20 17:53:49 as
	Stable high-copy-number bacteriophage lambda promoter vectors for overproduction of proteins in Escherichia coli. [My Copy] Gene, Vol. 176, No. 1-2. (17 October 1996), pp. 49-53. by C. A. Love, P. E. Lilley, N. E. Dixon posted to synthetic_biology phage_lambda genetic_parts escherichia_coli by genocad on 2009-11-20 17:20:27 as
	An improved positive selection plasmid vector constructed by oligonucleotide mediated mutagenesis. [My Copy] Nucleic acids research, Vol. 11, No. 22. (25 November 1983), pp. 8019-8030. by B. Nilsson, M. Uhlén, S. Josephson, S. Gatenbeck, L. Philipson posted to synthetic_biology phage_lambda genetic_parts escherichia_coli by genocad on 2009-11-20 16:39:53 as
	Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion [My Copy] The EMBO Journal, Vol. 20, No. 10. (15 May 2001), pp. 2528-2535. by Attila Becskei, Bertrand Seraphin, Luis Serrano posted to synthetic_biology switch noise gene_expression feedback by dbikard on 2009-11-20 14:52:43 as
	Bistability by multiple phosphorylation of regulatory proteins [My Copy] Progress in Biophysics and Molecular Biology, Vol. 100, No. 1-3. (11 September 2009), pp. 47-56. by Orsolya Kapuy, Debashis Barik, Maria R. Domingo Sananes, John J. Tyson, Béla Novák posted to systems_biology by pjmaybank on 2009-11-20 11:03:18 as
	Novel Electrochemically Active Bacterium Phylogenetically Related to Arcobacter butzleri, Isolated from a Microbial Fuel Cell [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 23. (1 December 2009), pp. 7326-7334. by Viatcheslav Fedorovich, Matthew C. Knighton, Eulyn Pagaling, F. Bruce Ward, Andrew Free, Igor Goryanin posted to synthetic_biology energy electron_acceptors electricity bacteria by dbikard on 2009-11-20 10:34:44 as
	Potential impact of synthetic biology on the development of microbial systems for the production of renewable fuels and chemicals [My Copy] Current Opinion in Biotechnology, Vol. 20, No. 3. (27 June 2009), pp. 325-329. by Stephen Picataggio posted to synthetic_biology review metabolic_engineering by Vincent_Rouilly on 2009-11-19 18:05:15 as along with 1 person druvus
	Metagenomics, biotechnology with non-culturable microbes [My Copy] Applied Microbiology and Biotechnology, Vol. 75, No. 5. (1 July 2007), pp. 955-962. by Christel Schmeisser, Helen Steele, Wolfgang Streit posted to synthetic_biology review microbial_ecology microbes metagenomics by Vincent_Rouilly on 2009-11-19 18:04:45 as
	Systems-level dynamic analyses of fate change in murine embryonic stem cells [My Copy] Nature, Vol. 462, No. 7271. (19 November 2009), pp. 358-362. by Rong Lu, Florian Markowetz, Richard D. Unwin, et al.Jeffrey T. Leek, Edoardo M. Airoldi, Ben D. MacArthur, Alexander Lachmann, Roye Rozov, Avi Ma/'ayan, Laurie A. Boyer, Olga G. Troyanskaya, Anthony D. Whetton, Ihor R. Lemischka posted to systems-biology human data cell-fate by pedrobeltrao on 2009-11-19 00:15:07 as along with 3 people and 1 group gbloeb frohike balabu Journal picks
	Combining chromatin immunoprecipitation and oligonucleotide tiling arrays (ChIP-Chip) for functional genomic studies. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 556 (2009), pp. 155-164. by Jérôme Eeckhoute, Mathieu Lupien, Myles Brown posted to tiling systems-biology oligonucleotide microarray functional-genomics chromatin chip-chip array by bertelsen on 2009-11-18 22:43:10 as
	Models and computational strategies linking physiological response to molecular networks from large-scale data. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 366, No. 1878. (13 September 2008), pp. 3067-3089. by Fernando Ortega, Katrin Sameith, Nil Turan, et al.Russell Compton, Victor Trevino, Marina Vannucci, Francesco Falciani posted to systems-biology review physiology pathways networks multi-scale molecular modularity models integration complexity by bertelsen on 2009-11-18 20:26:07 as along with 2 people aviad_work cswinburne
	Modelling dynamic processes in yeast [My Copy] Yeast, Vol. 24, No. 11. (2007), pp. 943-959. by Edda Klipp posted to yeast systems_biology dynamic_model by schwartzjmc on 2009-11-18 14:45:37 as along with 2 people pmalkus Katieleonard
	Architecture-Dependent Noise Discriminates Functionally Analogous Differentiation Circuits [My Copy] Cell, Vol. 139, No. 3. (30 October 2009), pp. 512-522. by Tolga Çağatay, Marc Turcotte, Michael B. Elowitz, Jordi Garcia-Ojalvo, Gürol M. Süel posted to systems_biology by maren on 2009-11-18 14:06:35 as along with 4 people dbikard jjray samubernard venancio
	Impact of systems biology on metabolic engineering of <i>Saccharomyces cerevisiae</i> [My Copy] FEMS Yeast Research, Vol. 8, No. 1. (February 2008), pp. 122-131. by Jens Nielsen, Michael C. Jewett posted to yeast_saccharomyces_cerevisiae yeast systems_biology review metabolic_engineering by Vincent_Rouilly on 2009-11-18 12:05:22 as along with 1 group BioVT
	Does massively parallel DNA resequencing signify the end of histopathology as we know it? [My Copy] The Journal of Pathology, Vol. 9999, No. 9999. (2009), n/a. by Samuel A. J. R. Aparicio, David G. Huntsman posted to sysbio pathology genomics by brianb on 2009-11-17 21:15:50 as
	Accurate prediction of gene feedback circuit behavior from component properties [My Copy] Mol Syst Biol, Vol. 3 (13 November 2007) by Nitzan Rosenfeld, Jonathan W. Young, Uri Alon, Peter S. Swain, Michael B. Elowitz posted to syntheticbiology feedback_circuit by Antoine_Decrulle on 2009-11-17 15:54:16 as along with 4 people austin balicea rsantana cjeans
	A computational model of gene expression in an inducible synthetic circuit. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2010), pp. 409-420. by Francesca Ceroni, Simone Furini, Silvio Cavalcanti posted to synthetic_biology by karthikraman on 2009-11-17 11:00:04 as
	In silico biology. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2010), pp. 477-480. by Chrisantha T. Fernando, Richard A. Goldstein, Phil Husbands, Dov J. Stekel posted to systems_biology by karthikraman on 2009-11-17 10:51:40 as
	Systems Biology: The elements and principles of Life. [My Copy] FEBS letters (12 November 2009) by Hans V. Westerhoff, Catherine Winder, Hanan Messiha, et al.Evangelos Simeonides, Malgorzata Adamczyk, Malkhey Verma, Frank J. Bruggeman, Warwick Dunn posted to systems_biology by karthikraman on 2009-11-17 10:50:13 as along with 1 person flbarroso
	REVERSE ENGINEERING AND SYNTHESIS OF BIOMOLECULAR SYSTEMS - Session Introduction. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2010), pp. 383-384. by Gil Alterovitz, Silvio Cavalcanti, Taro M. Muso, Marco F. Ramoni, May Wang posted to synthetic_biology by karthikraman on 2009-11-17 10:49:46 as
	The challenges of informatics in synthetic biology: from biomolecular networks to artificial organisms. [My Copy] Briefings in bioinformatics (11 November 2009), bbp054. by Gil Alterovitz, Taro Muso, Marco F. Ramoni posted to synthetic_biology by karthikraman on 2009-11-17 10:48:48 as along with 3 people renatomilani Vincent_Rouilly druvus
	Simulation-based model selection for dynamical systems in systems and population biology [My Copy] (9 Nov 2009) by Tina Toni, Michael P. H. Stumpf posted to sysbio sequential_monte_carlo model_selection mcmc bioinformatics bayes arxiv abc by dah on 2009-11-17 09:46:17 as along with 1 person tomt21
	Pathway knowledge base: An integrated pathway resource using BioPAX [My Copy] Applied Ontology, Vol. 3, No. 4. (1 January 2008), pp. 235-245. by Nikesh Kotecha, Kyle Bruck, William Lu, Nigam Shah posted to systems-biology rdf pathway biopax by fgibson on 2009-11-16 13:45:24 as along with 2 people kshameer allysonlister
	Applications of genome-scale metabolic reconstructions [My Copy] Molecular Systems Biology, Vol. 5 (03 November 2009) by Matthew A. Oberhardt, Bernhard O. Palsson, Jason A. Papin posted to systems_biology by pjmaybank on 2009-11-16 12:29:15 as along with 3 people michaelbarton arne pablocarb
	Integrating BioPAX pathway knowledge with SBML models [My Copy] IET Systems Biology, Vol. 3, No. 5. (2009), pp. 317-328. by O. Ruebenacker, I. I. Moraru, J. C. Schaff, M. L. Blinov posted to systems-biology semantic-data-integration sbml data-integration biopax by allysonlister on 2009-11-16 11:19:06 as
	Graph theory and networks in Biology [My Copy] Systems Biology, IET In Systems Biology, IET, Vol. 1, No. 2. (2007), pp. 89-119. by O. Mason, M. Verwoerd posted to weighted_graphs topology theoretical_techniques systems_biology synchronisation molecular_networks interaction_networks hierarchical_structure disease_propagation centrality biology by winterstream on 2009-11-16 09:09:40 as along with 4 people pedagand lalgarve AbnerCYH mjoach
	When kinases meet mathematics: the systems biology of MAPK signalling. [My Copy] FEBS letters, Vol. 579, No. 8. (21 March 2005), pp. 1891-1895. by Walter Kolch, Muffy Calder, David Gilbert posted to systems-biology mapk by guhjy on 2009-11-16 02:45:10 as along with 2 people agonzale arne
	On the basic computational structure of gene regulatory networks [My Copy] Mol. BioSyst., Vol. 5, No. 12. (2009), pp. 1617-1629. by Carlos Rodriguez-Caso, Bernat Corominas-Murtra, Ricard V. Sole posted to gene_networks computing by karthikraman on 2009-11-14 17:35:48 as
	Coexpression network based on natural variation in human gene expression reveals gene interactions and functions [My Copy] Genome Research, Vol. 19, No. 11. (1 November 2009), pp. 1953-1962. by Renuka R. Nayak, Michael Kearns, Richard S. Spielman, Vivian G. Cheung posted to natural_variation human_gene_expression gene_networks by nsc129psu on 2009-11-13 18:58:43 as along with 9 people and 1 group antonkratz iskathy lp2 TRHvidsten megraw owhitney rdiaz tmmurali natstreet Journal picks
	A generic algorithm for layout of biological networks [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 375. by Falk Schreiber, Tim Dwyer, Kim Marriott, Michael Wybrow posted to network layout graph_layout generic_algorithm biological_networks bioinformatics by davidmam on 2009-11-13 10:07:48 as along with 3 people calderonv karthikraman ngehlenborg
	Myopic selection of novel information drives evolution [My Copy] Current Opinion in Biotechnology, Vol. 20, No. 4. (21 August 2009), pp. 504-508. by Antoine Danchin posted to synthetic-biology evolution enzyme_evolution enzyme enzy by pablocarb on 2009-11-13 09:57:03 as
	The pedestrian watchmaker: Genetic clocks from engineered oscillators [My Copy] FEBS Letters (10 November 2009) by Natalie A. Cookson, Lev S. Tsimring, Jeff Hasty posted to synthetic_biology circadian_oscillators by karthikraman on 2009-11-13 07:24:15 as along with 1 person drmacgregor

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mmt's watchlist [more than 800 articles] Export

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