A Novel Representation Approach to DNA Sequence and Its Application Export

@article{citeulike:4179647, abstract = {<para> The representation of a DNA sequence is the first stage of genome analysis. A wide variety of approaches has been proposed for different applications in bioinformatics. In this letter, based on the principle of symbolic dynamics, a novel representation approach is proposed, which maps DNA sequence into 3-D chaotic sequences of sawtooth function and completely conserve its biological information. With the application of the new representation approach to DNA sequence, three extended Kalman filters are used to implement gene prediction. Simulation results are presented to illustrate the validity and feasibility of the proposed representation approach to DNA sequence. </para>}, author = {Wang, S. Y. and Tian, F. C. and Liu, X. and Wang, J.}, booktitle = {Signal Processing Letters, IEEE}, citeulike-article-id = {4179647}, citeulike-linkout-0 = {http://dx.doi.org/10.1109/LSP.2009.2014291}, citeulike-linkout-1 = {http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=4785267}, doi = {10.1109/LSP.2009.2014291}, journal = {Signal Processing Letters, IEEE}, keywords = {bioinformatics, genomesequencing, protein\_sequences}, number = {4}, pages = {275--278}, posted-at = {2009-03-15 20:03:58}, priority = {2}, title = {A Novel Representation Approach to DNA Sequence and Its Application}, url = {http://dx.doi.org/10.1109/LSP.2009.2014291}, volume = {16}, year = {2009} }

TY - JOUR ID - citeulike:4179647 L3 - citeulike-article-id:4179647 N2 - <para> The representation of a DNA sequence is the first stage of genome analysis. A wide variety of approaches has been proposed for different applications in bioinformatics. In this letter, based on the principle of symbolic dynamics, a novel representation approach is proposed, which maps DNA sequence into 3-D chaotic sequences of sawtooth function and completely conserve its biological information. With the application of the new representation approach to DNA sequence, three extended Kalman filters are used to implement gene prediction. Simulation results are presented to illustrate the validity and feasibility of the proposed representation approach to DNA sequence. </para> IS - 4 JF - Signal Processing Letters, IEEE EP - 278 TI - A Novel Representation Approach to DNA Sequence and Its Application VL - 16 T2 - Signal Processing Letters, IEEE SP - 275 KW - bioinformatics KW - genomesequencing KW - protein_sequences AU - Wang, SY AU - Tian, FC AU - Liu, X AU - Wang, J PY - 2009/// UR - http://dx.doi.org/10.1109/LSP.2009.2014291 ER -