mmuecke's bioinformatics [17 articles] Export

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	A Highly Parameterized and Efficient FPGA-Based Skeleton for Pairwise Biological Sequence Alignment [My Copy] Very Large Scale Integration (VLSI) Systems, IEEE Transactions on In Very Large Scale Integration (VLSI) Systems, IEEE Transactions on, Vol. 17, No. 4. (2009), pp. 561-570. by K. Benkrid, Ying Liu, A. Benkrid posted to bioinformatics fpga genomesequencing high-performance_computing reconfigurable_computing by mmuecke on 2009-04-28 08:40:36 as
	A Novel Representation Approach to DNA Sequence and Its Application [My Copy] Signal Processing Letters, IEEE In Signal Processing Letters, IEEE, Vol. 16, No. 4. (2009), pp. 275-278. by S. Y. Wang, F. C. Tian, X. Liu, J. Wang posted to bioinformatics genomesequencing protein_sequences by mmuecke on 2009-03-15 20:03:58 as
	Computing with Proteins [My Copy] Computer In Computer, Vol. 42, No. 1. (2009), pp. 47-56. by Naren Ramakrishnan, Upinder S. Bhalla, John J. Tyson posted to bioinformatics protein_sequences trends by mmuecke on 2009-02-09 13:50:41 as
	A Survey of FPGAs for Acceleration of High Performance Computing and their Application to Computational Molecular Biology [My Copy] TENCON 2005 2005 IEEE Region 10 In TENCON 2005 2005 IEEE Region 10 (2005), pp. 1-6. by T. Ramdas, G. Egan posted to bioinformatics fpgasupercomputing genomesequencing molecular_docking molecular_dynamics reconfigurable_computing survey trends by mmuecke on 2008-07-01 08:14:09 as along with 1 person and 1 group nevarcds Reconfigurable Computing
	Reconfigurable architectures for bio-sequence database scanning on FPGAs [My Copy] Circuits and Systems II: Express Briefs, IEEE Transactions on [see also Circuits and Systems II: Analog and Digital Signal Processing, IEEE Transactions on] In Circuits and Systems II: Express Briefs, IEEE Transactions on [see also Circuits and Systems II: Analog and Digital Signal Processing, IEEE Transactions on], Vol. 52, No. 12. (2005), pp. 851-855. by T. F. Oliver, B. Schmidt, D. L. Maskell posted to bioinformatics fpga protein_sequences reconfigurable_computing by mmuecke on 2008-01-30 18:34:00 as
	Grid computing and biomolecular simulation [My Copy] Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 363, No. 1833. (2005), pp. 2017-2035. by Christopher J. Woods, Muan H. Ng, Steven Johnston, et al.Stuart E. Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Paul Jeffreys, Simon Cox, Jeremy G. Frey, Mark S. Sansom, Jonathan W. Essex posted to bioinformatics high-performance_computing molecular_docking molecular_dynamics by mmuecke on 2008-01-21 12:27:45 as
	Protein-Protein Interfaces: Properties, Preferences, and Projections [My Copy] J. Proteome Res., Vol. 6, No. 7. (6 July 2007), pp. 2576-2586. by J. J. Headd, Y. E. A. Ban, P. Brown, H. Edelsbrunner, M. Vaidya, J. Rudolph posted to bioinformatics molecular_docking by mmuecke on 2008-01-08 16:58:26 as along with 1 person higueruelo
	Structure-based virtual screening: an overview [My Copy] Drug Discovery Today, Vol. 7, No. 20. (15 October 2002), pp. 1047-1055. by Paul D. Lyne posted to bioinformatics molecular_docking by mmuecke on 2007-03-01 12:10:43 as along with 2 people LamBras nickolay
	Accelerator design for protein sequence HMM search [My Copy] In ICS '06: Proceedings of the 20th annual international conference on Supercomputing (2006), pp. 288-296. by Rahul P. Maddimsetty, Jeremy Buhler, Roger D. Chamberlain, Mark A. Franklin, Brandon Harris posted to bioinformatics fpga protein_sequences by mmuecke on 2007-02-21 15:04:52 as
	Hardware-accelerated analysis of non-protein-coding RNAs [My Copy] (2005) by Ola Snøve posted to bioinformatics fpga by mmuecke on 2007-02-15 16:43:07 as
	Real-time primer design for DNA chips [My Copy] Parallel and Distributed Processing Symposium, 2003. Proceedings. International (2003), 8 pp.. by H. Simmler, H. Singpiel, R. Manner posted to bioinformatics fpga by mmuecke on 2006-12-07 19:02:19 as
	An experimental study of optimizing bioinformatics applications [My Copy] Parallel and Distributed Processing Symposium, 2006. IPDPS 2006. 20th International (2006), 8 pp.. by Guangming Tan, Lin Xu, Shengzhong Feng, Ninghui Sun posted to bioinformatics fpga fpgasupercomputing by mmuecke on 2006-12-07 18:57:29 as along with 1 person smithmc
	Protein Explorer: A Petaflops Special-Purpose Computer System for Molecular Dynamics Simulations [My Copy] In SC '03: Proceedings of the 2003 ACM/IEEE conference on Supercomputing (2003) by Makoto Taiji, Tetsu Narumi, Yousuke Ohno, et al.Noriyuki Futatsugi, Atsushi Suenaga, Naoki Takada, Akihiko Konagaya posted to bioinformatics high-performance_computing by mmuecke on 2006-11-28 13:00:33 as
	Heterogeneous Processing: a Strategy for Augmenting Moore's Law [My Copy] Linux Journal by Amar Shan posted to bioinformatics fpgasupercomputing genomesequencing by mmuecke on 2006-11-23 18:05:32 as
	Bioinformatics---an introduction for computer scientists [My Copy] ACM Comput. Surv., Vol. 36, No. 2. (June 2004), pp. 122-158. by Jacques Cohen posted to bioinformatics by mmuecke on 2006-11-13 14:57:15 as along with 16 people and 3 groups suzhan ruichu MarcoAlvarez druvus pwais neilernst malenitah2 asilva Ayest smithco eweaver afragop bigbossman sugarexpletive quianominorleo bozdagd CHISEL Complex_Real_Networks Plant-Tissue-Simulation
	Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology [My Copy] In SC '05: Proceedings of the 2005 ACM/IEEE conference on Supercomputing (2005) by Yun Zhang, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova posted to bioinformatics by mmuecke on 2006-11-13 14:42:44 as along with 1 person and 1 group AbnerCYH CSBBGraphTheory
	Manifold similarity search of DNA sequences with reconfigurable hardware [My Copy] In FPGA '06: Proceedings of the 2006 ACM/SIGDA 14th international symposium on Field programmable gate arrays (2006), pp. 231-231. by Thinh N. Tran, Surin Kittitornkun, Shigenori Tomiyama posted to bioinformatics genomesequencing by mmuecke on 2006-10-30 14:12:34 as

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high-performance_computing	75
fpga	74
hdl	74
high_level_synthesis	66
floating_point	64
mpi	59
performance_analysis	51
parallel_programming	48
reconfigurable_computing	41
survey	39
computer_architecture	33
fpgas_in_hep	28
vlsi_design	28
error_analysis	27
fpgasupercomputing	27
fixedpoint	26
functional	26
vhdl	25
dsl	24
language_design	23
trends	23
matrix	22
molecular_dynamics	22
mpi_tools	22
reconfigurable_platforms	20
image_processing	19
compiler_design	18
bioinformatics	17
hdl_tool	17
dfg	16
numa	16
communication_algorithms	15
scientific_publishing	15
book	14
electronics_design_automation	13
mixed_precision	13
architecture_comparison	12
charmm	12
dsp_on_fpga	12
formal_language_theory	11
linear_algebra	11
svm	11
fft	10
multicore	10
teaching	10
interval_arithmetic	8
matrix_sparse	7
molecular_docking	7
parallel_algorithms	7
performance_modelling	7
signal_processing_theory	7
sopc	7
systemc	7
term_rewriting	7
computer_arithmetic	6
lhcb	6
lhc_transversefeedbacksystem	6
verification	6
genomesequencing	5
vlsi_design_theory	5
adl	4
case_study	4
formal_synthesis	4
gpu	4
hw_ip_reuse	4
infiniband	4
open_source_eda	4
protein_sequences	4
cell_cpu	3
confluence	3
language_embedding	3
middle_ware	3
unix_linux_solaris	3
analog_computing	2
generative_programming	2
people	2
powerefficient_computing	2
structural_computing	2
wsn	2
echo_state_networks	1
fpaa	1
graph_theory	1
image_feature_descriptors	1
mixed_signal	1
multi_stage_programming	1
nuclear_fusion	1
pde_solvers	1
quantization_noise	1
run-time_reconfiguration	1

mmuecke's bioinformatics [17 articles] Export

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