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mrm's library [44 articles]

Recent papers added to mrm's library.
  • Connected Components in Random Graphs with Given Expected Degree Sequences
    Annals of Combinatorics, Vol. 6, No. 2. (November 2002), pp. 125-145.
    by Fan Chung, Linyuan Lu
    posted to graphs by mrm on 2005-08-03 20:03:00 as ***
  • The Average Distances in Random Graphs with Given Expected Degrees
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 25. (2002), pp. 15879-15882.
    by Fan Chung, Linyuan Lu
    posted to graphs by mrm on 2005-08-03 19:56:47 as read along with 1 person kikiblue7
  • Neural Codes: Firing Rates and beyond
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 24. (1997), pp. 12740-12741.
    by Wulfram Gerstner, Andreas K Kreiter, Henry Markram, Andreas VM Herz
    posted to neural_coding by mrm on 2005-08-03 19:53:44 as **
  • Modelling genetic networks with noisy and varied experimental data: the circadian clock in Arabidopsis thaliana.
    J Theor Biol, Vol. 234, No. 3. (7 June 2005), pp. 383-393.
    by JC Locke, AJ Millar, MS Turner
    posted to circadian regulatory_networks by mrm on 2005-04-11 12:07:35 as read along with 1 person Happybene
  • Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data.
    Bioinformatics, Vol. 20, No. 12. (12 August 2004), pp. 1877-1886.
  • Open source software for the analysis of microarray data.
    Biotechniques, Vol. Suppl (March 2003), pp. 45-51.
  • Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control.
    FEBS J, Vol. 272, No. 1. (January 2005), pp. 244-258.
  • Shape and dynamics of thermoregulating honey bee clusters.
    J Theor Biol, Vol. 204, No. 1. (7 May 2000), pp. 1-14.
    by DJ Sumpter, DS Broomhead
    posted to discrete_agents by mrm on 2005-01-21 16:11:57 as **
  • Ants and agents: a process algebra approach to modelling ant colony behaviour.
    Bull Math Biol, Vol. 63, No. 5. (September 2001), pp. 951-980.
    posted to discrete_agents by mrm on 2005-01-21 16:11:36 as **
  • Relating individual behaviour to population dynamics.
    Proc R Soc Lond B Biol Sci, Vol. 268, No. 1470. (7 May 2001), pp. 925-932.
    by DJ Sumpter, DS Broomhead
    posted to discrete_agents by mrm on 2005-01-21 16:11:19 as **
  • Centralized immunogens as a vaccine strategy to overcome HIV-1 diversity.
    Expert Rev Vaccines, Vol. 3, No. 4 Suppl. (August 2004)
    by F Gao, BT Korber, E Weaver, HX Liao, BH Hahn, BF Haynes
    posted to hiv by mrm on 2005-01-21 16:08:07 as **
  • Scientific collaboration networks. II. Shortest paths, weighted networks, and centrality.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 64, No. 1 Pt 2. (July 2001)
    by ME Newman
  • Scientific collaboration networks. I. Network construction and fundamental results.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 64, No. 1 Pt 2. (July 2001)
    by ME Newman
  • Are randomly grown graphs really random?
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 64, No. 4 Pt 1. (October 2001)
    by DS Callaway, JE Hopcroft, JM Kleinberg, ME Newman, SH Strogatz
    posted to graphs probability by mrm on 2005-01-21 16:04:53 as *** along with 3 people Borelli junwang4 kei_s
  • Scaling and percolation in the small-world network model.
    Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics, Vol. 60, No. 6 Pt B. (December 1999), pp. 7332-7342.
    by ME Newman, DJ Watts
    posted to social_networks by mrm on 2005-01-21 16:03:35 as read along with 1 person yoh
  • Community structure in social and biological networks.
    Proc Natl Acad Sci U S A, Vol. 99, No. 12. (11 June 2002), pp. 7821-7826.
    by M Girvan, ME Newman
  • Assortative mixing in networks.
    Phys Rev Lett, Vol. 89, No. 20. (11 November 2002)
    by ME Newman
    posted to social_networks by mrm on 2005-01-21 15:59:24 as read along with 1 person yoh
  • Mixing patterns in networks.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 67, No. 2 Pt 2. (February 2003)
    by ME Newman
    posted to social_networks by mrm on 2005-01-21 15:59:01 as read
  • Why social networks are different from other types of networks.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 68, No. 3 Pt 2. (September 2003)
    by ME Newman, J Park
  • Finding and evaluating community structure in networks.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 69, No. 2 Pt 2. (February 2004)
    by ME Newman, M Girvan
    posted to social_networks by mrm on 2005-01-21 15:58:02 as ** along with 3 people rasca adriandefroment iris_2001
  • From The Cover: Diffusion-based method for producing density-equalizing maps.
    Proc Natl Acad Sci U S A, Vol. 101, No. 20. (18 May 2004), pp. 7499-7504.
    by MT Gastner, ME Newman
    posted to plain_cool by mrm on 2005-01-21 15:57:36 as **** along with 1 person ianturton
  • Analysis of weighted networks.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 70, No. 5 Pt 2. (November 2004)
    by ME Newman
  • On noise reduction methods for chaotic data.
    Chaos, Vol. 3, No. 2. (April 1993), pp. 127-141.
    by Peter Grassberger, Rainer Hegger, Holger Kantz, Carsten Schaffrath, Thomas Schreiber
    posted to stats time_series by mrm on 2005-01-21 15:53:33 as read
  • Estimating mutual information.
    Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 69, No. 6 Pt 2. (June 2004)
  • Go with the winners: a general Monte Carlo strategy
    Computer Physics Communications, Vol. 147, No. 1-2. (01 August 2002), pp. 64-70.
    by Peter Grassberger
    posted to markov_chains by mrm on 2005-01-21 15:47:00 as **
  • Random Graph Models of Social Networks
    by MEJ Newman, DJ Watts, SH Strogatz
  • Effects of Selective Neutrality on the Evolution of Molecular Species
    Proceedings: Biological Sciences, Vol. 265, No. 1403. (1998), pp. 1333-1338.
    by MEJ Newman, Robin Engelhardt
    posted to molecular_evolution by mrm on 2005-01-21 15:41:28 as **
  • Random Walks Arising in Random Number Generation
    The Annals of Probability, Vol. 15, No. 3. (1987), pp. 1148-1165.
    by FRK Chung, Persi Diaconis, RL Graham
    posted to markov_chains probability by mrm on 2005-01-21 15:38:22 as ***
  • A Geometric Interpretation of the Metropolis-Hastings Algorithm
    Statistical Science, Vol. 16, No. 4. (2001), pp. 335-339.
    by Louis J Billera, Persi Diaconis
    posted to markov_chains by mrm on 2005-01-21 15:35:25 as ***
  • Fair Dice
    The American Mathematical Monthly, Vol. 96, No. 4. (1989), pp. 337-339.
    by Persi Diaconis, Joseph B Keller
    posted to probability by mrm on 2005-01-21 15:34:55 as read along with 1 person josel0
  • Iterated Random Functions
    SIAM Review, Vol. 41, No. 1. (1999), pp. 45-76.
    by Persi Diaconis, David Freedman
    posted to ifs by mrm on 2005-01-21 15:33:35 as read along with 1 person josel0
  • Trailing the Dovetail Shuffle to its Lair
    The Annals of Applied Probability, Vol. 2, No. 2. (1992), pp. 294-313.
    by Dave Bayer, Persi Diaconis
    posted to probability by mrm on 2005-01-21 15:33:17 as **
  • Geometric Bounds for Eigenvalues of Markov Chains
    The Annals of Applied Probability, Vol. 1, No. 1. (1991), pp. 36-61.
    by Persi Diaconis, Daniel Stroock
    posted to markov_chains by mrm on 2005-01-21 15:32:44 as **
  • Shuffling Cards and Stopping Times
    The American Mathematical Monthly, Vol. 93, No. 5. (1986), pp. 333-348.
    by David Aldous, Persi Diaconis
    posted to probability by mrm on 2005-01-21 15:31:50 as ** along with 1 person josel0
  • Heat Conduction and Entropy Production in a One-Dimensional Hard-Particle Gas
    (1 August 2002)
    by Peter Grassberger, Walter Nadler, Lei Yang
    posted to stat_mech by mrm on 2005-01-21 15:25:27 as ***
  • Robustness, Flexibility, and the Role of Lateral Inhibition in the Neurogenic Network
    Current Biology, Vol. 12, No. 10. (14 May 2002), pp. 778-786.
    by Eli Meir, George von Dassow, Edwin Munro, Garrett M Odell
    posted to regulatory_networks robustness by mrm on 2005-01-18 21:23:35 as read along with 1 person rklancer
  • The segment polarity network is a robust developmental module.
    Nature, Vol. 406, No. 6792. (13 July 2000), pp. 188-192.
    by G von Dassow, E Meir, EM Munro, GM Odell
  • On the uniform generation of random graphs with prescribed degree sequences
    (30 May 2004)
    by R Milo, N Kashtan, S Itzkovitz, MEJ Newman, U Alon
  • The Silicon Cell Initiative
    Current Genomics, Vol. 5, No. 8., 687.
    by Jacky L Snoep, Hans V Westerhoff
    posted to simulation by mrm on 2005-01-18 21:01:55 as *** along with 2 people dullhunk rmj001
  • What makes biochemical networks tick?
    Eur J Biochem, Vol. 271, No. 19. (October 2004), pp. 3877-3887.
  • Random graphs with arbitrary degree distributions and their applications
    (7 May 2001)
    by MEJ Newman, SH Strogatz, DJ Watts
  • Mixing patterns in networks
    (4 February 2003)
    by MEJ Newman
  • The structure and function of complex networks
    (25 March 2003)
    by MEJ Newman
  • A measure of betweenness centrality based on random walks
    (1 September 2003)
    by MEJ Newman
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