The HuRef Browser: a web resource for individual human genomics Export

@article{citeulike:3725249, abstract = {The HuRef Genome Browser is a web application for the navigation and analysis of the previously published genome of a human individual, termed HuRef. The browser provides a comparative view between the NCBI human reference sequence and the HuRef assembly, and it enables the navigation of the HuRef genome in the context of HuRef, NCBI and Ensembl annotations. Single nucleotide polymorphisms, indels, inversions, structural and copy-number variations are shown in the context of existing functional annotations on either genome in the comparative view. Demonstrated here are some potential uses of the browser to enable a better understanding of individual human genetic variation. The browser provides full access to the underlying reads with sequence and quality information, the genome assembly and the evidence supporting the identification of DNA polymorphisms. The HuRef Browser is a unique and versatile tool for browsing genome assemblies and studying individual human sequence variation in a diploid context. The browser is available online at http://huref.jcvi.org. 10.1093/nar/gkn939}, author = {Axelrod, Nelson and Lin, Yuan and Ng, Pauline C. and Stockwell, Timothy B. and Crabtree, Jonathan and Huang, Jiaqi and Kirkness, Ewen and Strausberg, Robert L. and Frazier, Marvin E. and Venter, J. Craig and Kravitz, Saul and Levy, Samuel}, citeulike-article-id = {3725249}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/nar/gkn939}, citeulike-linkout-1 = {http://nar.oxfordjournals.org/content/gkn939v1/.abstract}, citeulike-linkout-2 = {http://nar.oxfordjournals.org/content/gkn939v1/.full.pdf}, citeulike-linkout-3 = {http://nar.oxfordjournals.org/cgi/content/abstract/37/suppl_1/D1018}, citeulike-linkout-4 = {http://view.ncbi.nlm.nih.gov/pubmed/19036787}, citeulike-linkout-5 = {http://www.hubmed.org/display.cgi?uids=19036787}, day = {26}, doi = {10.1093/nar/gkn939}, issn = {1362-4962}, journal = {Nucl. Acids Res.}, keywords = {browser, genome, huref, venter}, month = {November}, number = {Database issue}, pages = {gkn939+}, posted-at = {2009-11-09 21:40:24}, priority = {2}, title = {The HuRef Browser: a web resource for individual human genomics}, url = {http://dx.doi.org/10.1093/nar/gkn939}, volume = {37}, year = {2008} }

TY - JOUR ID - citeulike:3725249 L3 - citeulike-article-id:3725249 N2 - The HuRef Genome Browser is a web application for the navigation and analysis of the previously published genome of a human individual, termed HuRef. The browser provides a comparative view between the NCBI human reference sequence and the HuRef assembly, and it enables the navigation of the HuRef genome in the context of HuRef, NCBI and Ensembl annotations. Single nucleotide polymorphisms, indels, inversions, structural and copy-number variations are shown in the context of existing functional annotations on either genome in the comparative view. Demonstrated here are some potential uses of the browser to enable a better understanding of individual human genetic variation. The browser provides full access to the underlying reads with sequence and quality information, the genome assembly and the evidence supporting the identification of DNA polymorphisms. The HuRef Browser is a unique and versatile tool for browsing genome assemblies and studying individual human sequence variation in a diploid context. The browser is available online at http://huref.jcvi.org. 10.1093/nar/gkn939 IS - Database issue JF - Nucl. Acids Res. SN - 1362-4962 TI - The HuRef Browser: a web resource for individual human genomics VL - 37 SP - gkn939 KW - browser KW - genome KW - huref KW - venter AU - Axelrod, Nelson AU - Lin, Yuan AU - Ng, Pauline AU - Stockwell, Timothy AU - Crabtree, Jonathan AU - Huang, Jiaqi AU - Kirkness, Ewen AU - Strausberg, Robert AU - Frazier, Marvin AU - Venter, Craig AU - Kravitz, Saul AU - Levy, Samuel PY - 2008/11/26/ UR - http://dx.doi.org/10.1093/nar/gkn939 ER -