n00c's algorithm [85 articles] Export

Recent papers added to n00c's library classified by the tag algorithm. You can also see everyone's algorithm.

	BreakDancer: an algorithm for high-resolution mapping of genomic structural variation [My Copy] Nature Methods, Vol. 6, No. 9. (09 August 2009), pp. 677-681. by Ken Chen, John W. Wallis, Michael D. McLellan, et al.David E. Larson, Joelle M. Kalicki, Craig S. Pohl, Sean D. McGrath, Michael C. Wendl, Qunyuan Zhang, Devin P. Locke, Xiaoqi Shi, Robert S. Fulton, Timothy J. Ley, Richard K. Wilson, Li Ding, Elaine R. Mardis posted to tool sv software map breakdancer algorithm by n00c on 2009-12-01 13:34:45 as along with 13 people and 1 group Leaflet heliopais stubrown dakelley fenghezi daed natstreet druvus sitalange qayub gdb jasontsai danmaclean Journal picks
	GR-Aligner: an algorithm for aligning pairwise genomic sequences containing rearrangement events [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2188-2193. by Te-Chin Chu, Tsunglin Liu, D. T. Lee, Greg C. Lee, Arthur C. Shih posted to structural-variation rearrangment pairwise gr-aligner alignment algorithm by n00c on 2009-12-01 00:12:24 as along with 3 people torfinnnome nlapalu jmeppley
	BFAST: An Alignment Tool for Large Scale Genome Resequencing [My Copy] PLoS ONE, Vol. 4, No. 11. (11 November 2009), e7767. by Nils Homer, Barry Merriman, Stanley F. Nelson posted to tool software resequencing mapper map genome bfast alignment algorithm by n00c on 2009-11-18 22:33:20 as along with 5 people friendpine zwang druvus torfinnnome idonaldson
	A block-sorting lossless data compression algorithm. [My Copy] No. 124. (1994) by M. Burrows, D. J. Wheeler posted to compression bwt burrows-wheeler algorithm by n00c on 2009-11-12 17:55:38 as along with 6 people and 2 groups kistijantoro stanley rahul michaelmampaey msakai langmead SRL ADMiRes
	Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes [My Copy] Genome Research, Vol. 19, No. 7. (15 July 2009), pp. 1270-1278. by Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Sahinalp posted to variation structure sequencing genome combinatorics algorithm by n00c on 2009-11-06 17:06:53 as along with 18 people darian hzoltan rdiaz aezrin jandot GustavoLacerda guhjy jessopher megraw jonilaserson chrisamiller dandaman sameersoi djkt dakelley APRegier natstreet druvus
	Weighted Connected Component Clustering [My Copy] by Chris Mueller posted to graph-theory graph connected-component clustering algorithm by n00c on 2009-10-29 10:03:41 as
	The GNUMAP Algorithm: Unbiased Probabilistic Mapping of Oligonucleotides from Next-Generation Sequencing [My Copy] Bioinformatics (27 October 2009), btp614. by Nathan L. Clement, Quinn Snell, Mark J. Clement, et al.Peter C. Hollenhorst, Jahnvi Purwar, Barbara J. Graves, Bradley R. Cairns, W. Evan Johnson posted to short-read map gnumap algorithm by n00c on 2009-10-28 23:01:09 as along with 4 people darian operon heliopais druvus
	Why greed works for shortest common superstring problem [My Copy] Theoretical Computer Science (15 September 2009) by Bin Ma posted to scs np-complete greed assembly algorithm by n00c on 2009-10-16 04:38:35 as along with 2 people seb1 Neeperando
	An Eulerian path approach to DNA fragment assembly. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 17. (14 August 2001), pp. 9748-9753. by P. A. Pevzner, H. Tang, M. S. Waterman posted to eulerian dna assembly algorithm by n00c on 2009-10-01 16:16:53 as along with 14 people and 2 groups aheilbut jengeldk robsyme Neeperando idoerg dakelley brl A_Olympia briann jmeppley AaronDarling nedwards azazello jwhitney Philosophy_of_Information Blog_and_Wiki_Research
	DiBayes: A SNP Detection Algorithm for Next-Generation Dibase Sequencing [My Copy] by Susan Tang, Fiona C. L. Hyland, Thomas C. Wessel, Jon Sorenson, Heather Peckham, Francisco M. De La Vega posted to solid snp-calling dibase bayesian algorithm abi by n00c on 2009-09-28 16:16:33 as
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted to tool software de-novo assembly allpaths algorithm by n00c on 2009-09-28 15:17:37 as along with 23 people and 1 group ajsferreira carlk jmanning2k APRegier pachorip jonilaserson operon thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor Mycology
	Introduction to Algorithms, Second Edition [My Copy] (01 September 2001) by Thomas H. Cormen, Charles E. Leiserson, Ronald L. Rivest, Clifford Stein posted to computer-science book algorithm by n00c on 2009-09-26 01:10:38 as along with 21 people newdawn seb1 ekatsyrk jmmcg Gorzomagnificent Fantozzi seninp dagmar citeUlike123 jcheng dragonrez marciolima gurkanbebek tmarscha dodger042 napvasconcelos chandlerc csacca pawelt eporreca sven_luzar
	A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG) [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2863-2864. by Michael Brudno, Paul Medvedev, Jens Stoye, Francisco M. De La Vega posted to short-read report algorithm by n00c on 2009-09-25 17:10:21 as along with 3 people seb1 idonaldson druvus
	A fast string searching algorithm [My Copy] Commun. ACM, Vol. 20, No. 10. (October 1977), pp. 762-772. by Robert S. Boyer, J. Strother Moore posted to string-scanning string-matching boyer-moore algorithm by n00c on 2009-09-24 03:24:24 as along with 6 people diegoceccarelli dmeister jrw sunniesheu sonofnel romano
	q-Gram Matching Using Tree Models [My Copy] IEEE Transactions on Knowledge and Data Engineering, Vol. 18, No. 4. (2006), pp. 433-447. by Prahlad Fogla, Wenke Lee posted to tree string-matching sliding-window q-gram pruning indexing data-structure algorithm by n00c on 2009-09-23 23:03:57 as
	Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences [My Copy] Journal of Computational Biology (22 September 2009), 090922085727012. by Kouichi Kimura, Yutaka Suzuki, Sumio Sugano, Asako Koike posted to solexa short-read illumina burrows-wheeler algorithm by n00c on 2009-09-23 21:05:06 as along with 3 people seb1 justinhjohnson druvus
	Compressed Compact Suffix Arrays [My Copy] Combinatorial Pattern Matching (2004), pp. 420-433. by Veli Mäkinen, Gonzalo Navarro posted to suffix-array fm-index data-structure algorithm by n00c on 2009-09-14 16:38:34 as along with 1 person dleinhaeuser
	Space Efficient Suffix Trees [My Copy] Foundations of Software Technology and Theoretical Computer Science (1998), pp. 1053-1053. by Ian Munro, Venkatesh Raman, Srinivasa S. Rao posted to suffix-stree space data-structure algorithm by n00c on 2009-09-14 16:36:51 as along with 1 person dleinhaeuser
	Efficient Construction of FM-index Using Overlapping Block Processing for Large Scale Texts [My Copy] Advances in Information Retrieval (2007), pp. 113-123. by Di Zhang, Yunquan Zhang, Jing Chen posted to text fm-index data-structure algorithm by n00c on 2009-09-14 16:35:55 as
	Algorithms on strings, trees, and sequences : computer science and computational biology [My Copy] (15 January 2007) by Dan Gusfield posted to string-matching sequence book algorithm by n00c on 2009-09-14 16:30:39 as along with 20 people and 2 groups abergeron stharward enricos Scis0000002 Neeperando mircea renewang timflutre ujh creswick tijl grzegorz luispedro emranmohdtamil hoangmit thonnardo pool007 nedwards ep161302 reyez Centre de Recherches Interdisciplinaires Pattern-Analysis
	Fast algorithms for large-scale genome alignment and comparison [My Copy] Nucl. Acids Res., Vol. 30, No. 11. (1 June 2002), pp. 2478-2483. by Arthur L. Delcher, Adam Phillippy, Jane Carlton, Steven L. Salzberg posted to tree mummer genome data-structure alignment algorithm by n00c on 2009-09-14 16:22:58 as along with 6 people umit treangen urgi yoanjacquemin bozdagd Neeperando
	Reducing the space requirement of suffix trees [My Copy] Software: Practice and Experience, Vol. 29, No. 13. (November 1999), pp. 1149-1171. by Stefan Kurtz posted to suffix-tree space data-structure algorithm by n00c on 2009-09-14 16:22:15 as along with 3 people dleinhaeuser nedwards ep161302
	New strategy to detect single nucleotide polymorphisms. [My Copy] Genetics and molecular research : GMR, Vol. 5, No. 1. (31 March 2006), pp. 143-153. by Miguel Galves, José Augusto Amgarten A. Quitzau, Zanoni Dias posted to snp-discovery snp-calling snp algorithm by n00c on 2009-09-13 09:23:02 as along with 1 person Ayest
	Application of machine learning in SNP discovery [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 4. by Lakshmi Matukumalli, John Grefenstette, David Hyten, Ik Y. Choi, Perry Cregan, Curtis Van Tassell posted to snp-discovery snp-calling machine-learning algorithm by n00c on 2009-09-13 09:21:42 as along with 1 person and 1 group druvus Visiting Position
	BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing [My Copy] Genome Research, Vol. 19, No. 10. (6 October 2009), pp. 1884-1895. by Wei-Chun Kao, Kristian Stevens, Yun S. Song posted to tool solexa software short-read sequencing illumina bustard bayesian bayescall algorithm by n00c on 2009-09-13 07:34:18 as along with 13 people and 2 groups heliopais dakelley lp2 megraw rdiaz torfinnnome djkt farhat druvus polivares stajich fpattyn jbhiatt BergmanLab Mycology
	SNP discovery using advanced algorithms and neural networks [My Copy] Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2528-2530. by Per Unneberg, Michael Stromberg, Fredrik Sterky posted to tool software snp-discovery snp neural-network forage algorithm by n00c on 2009-09-13 07:27:20 as along with 1 group Daniel
	Streaming Algorithms for Biological Sequence Alignment on GPUs [My Copy] Parallel and Distributed Systems, IEEE Transactions on In Parallel and Distributed Systems, IEEE Transactions on, Vol. 18, No. 9. (2007), pp. 1270-1281. by Liu Weiguo, B. Schmidt, G. Voss, W. Muller-Wittig posted to multiple-alignment gpu alignment algorithm by n00c on 2009-09-05 10:46:39 as
	Velvet: Algorithms for de novo short read assembly using de Bruijn graphs [My Copy] Genome Research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted to velvet sequencing graph de-novo de-brujin assembly algorithm by n00c on 2009-09-04 16:41:03 as along with 42 people and 3 groups ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq dswan dakelley jasontsai acn druvus natstreet nmohelli stajich farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb Bioinformatics DeNovoAssembly-SIMR Mycology
	Whole genome assembly from 454 sequencing output via modified DNA graph concept [My Copy] Computational Biology and Chemistry, Vol. 33, No. 3. (04 June 2009), pp. 224-230. by Jacek Blazewicz, Marcin Bryja, Marek Figlerowicz, et al.Piotr Gawron, Marta Kasprzak, Edward Kirton, Darren Platt, Jakub Przybytek, Aleksandra Swiercz, Lukasz Szajkowski posted to sequencing graph de-novo assembly algorithm 454 by n00c on 2009-09-04 13:12:14 as along with 5 people and 1 group GustavoLacerda stajich orzenil natstreet druvus Mycology
	T-REKS: identification of Tandem REpeats in sequences with a K-meanS based algorithm [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2632-2638. by Julien Jorda, Andrey V. Kajava posted to tandem t-reks repeats k-means algorithm by n00c on 2009-08-14 22:17:27 as along with 4 people and 1 group jforment reyez natstreet robfsouza Bioinformatics Core Service
	Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing [My Copy] Genome Research, Vol. 19, No. 7. (4 July 2009), pp. 1309-1315. by Wei Qu, Shin-ichi Hashimoto, Shinichi Morishita posted to algorithm cluster map rna-seq short-read tree by n00c on 2009-08-07 02:30:07 as along with 9 people mpizbioinfo heliopais druvus megraw nlapalu dakelley djkt operon natstreet
	Maximum likelihood genome assembly. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 8. (August 2009), pp. 1101-1116. by Paul Medvedev, Michael Brudno posted to algorithm assembly genome maximum-likelihood by n00c on 2009-08-05 21:57:26 as along with 7 people dakelley nuin walshtp djkt natstreet druvus operon
	A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1609-1616. by Zia Khan, Joshua S. Bloom, Leonid Kruglyak, Mona Singh posted to 454 algorithm alignment suffix-array by n00c on 2009-08-05 17:08:46 as along with 2 people guhjy djkt
	Text Algorithms [My Copy] (1994) by M. Crochemore, W. Rytter posted to algorithm book string-matching by n00c on 2009-08-04 16:06:05 as
	Short read DNA fragment anchoring algorithm [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009), S17. by Wendi Wang, Peiheng Zhang, Xinchun Liu posted to algorithm alignment short-read by n00c on 2009-07-31 18:24:28 as along with 1 person druvus
	RazerS--fast read mapping with sensitivity control. [My Copy] Genome research, Vol. 19, No. 9. (10 September 2009), pp. 1646-1654. by David Weese, Anne-Katrin K. Emde, Tobias Rausch, Andreas Döring, Knut Reinert posted to algorithm map razers short-read software tool by n00c on 2009-07-31 13:56:26 as along with 6 people and 1 group torfinnnome heliopais jandot reyez druvus natstreet Journal picks
	Tandem repeats finder: a program to analyze DNA sequences [My Copy] Nucl. Acids Res., Vol. 27, No. 2. (15 January 1999), pp. 573-580. by G. Benson posted to trf tool tandem-repeat-finder tandem software repeats lbi bu algorithm by n00c on 2009-07-28 21:37:57 as along with 6 people and 1 group Phobos natstreet druvus timflutre urgi bozdagd RubStudent
	Tree traversal in C without recursion [My Copy] C/C++ Users J., Vol. 18, No. 7. (July 2000), pp. 56-59. by Valery Creux posted to algorithm tree by n00c on 2009-07-23 23:30:51 as along with 1 person hgfernan
	Local alignment of two-base encoded DNA sequence [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (09 June 2009), 175. by Nils Homer, Barry Merriman, Stanley Nelson posted to abi algorithm alignment color-space solid by n00c on 2009-07-23 21:39:49 as along with 2 people lianping jmanning2k
	Factor Oracle: A New Structure for Pattern Matching [My Copy] SOFSEM’99: Theory and Practice of Informatics (2009), pp. 758-758. by Cyril Allauzen, Maxime Crochemore, Mathieu Raffinot posted to algorithm compression data-structure factor-oracle string-matching suffix-tree by n00c on 2009-07-22 04:37:46 as
	Converting suffix trees into factor/suffix oracles [My Copy] Journal of Discrete Algorithms, Vol. 6, No. 2. (June 2008), pp. 324-340. by I. Rusu posted to algorithm compression data-structure suffix-tree by n00c on 2009-07-22 04:13:55 as
	Faster Approximate String Matching [My Copy] Algorithmica, Vol. 23 (1999), pp. 127-158. by Ricardo B. Yates, Gonzalo Navarro posted to algorithm navarro string-matching by n00c on 2009-07-21 18:16:44 as
	A Guided Tour to Approximate String Matching [My Copy] ACM Computing Surveys, Vol. 33 (1999) by Gonzalo Navarro posted to algorithm alignment error-bound review string-matching by n00c on 2009-07-21 18:14:39 as
	Locating alignments with k differences for nucleotide and amino acid sequences. [My Copy] Computer applications in the biosciences : CABIOS, Vol. 4, No. 1. (March 1988), pp. 19-24. by G. M. Landau, U. Vishkin, R. Nussinov posted to algorithm alignment error-bound landau nussinov vishkin by n00c on 2009-07-21 16:55:06 as
	Adjust quality scores from alignment and improve sequencing accuracy. [My Copy] Nucleic acids research, Vol. 32, No. 17. (2004), pp. 5183-5191. by M. Li, M. Nordborg, L. M. Li posted to algorithm alignment error-model phred quality by n00c on 2009-07-20 17:24:26 as
	An efficient string matching algorithm with k differences for nucleotide and amino acid sequences. [My Copy] Nucleic acids research, Vol. 14, No. 1. (10 January 1986), pp. 31-46. by G. M. Landau, U. Vishkin, R. Nussinov posted to algorithm alignment error-bound landau nussinov vishkin by n00c on 2009-07-20 17:19:36 as
	A parallel strategy for biological sequence alignment in restricted memory space [My Copy] Journal of Parallel and Distributed Computing, Vol. 68, No. 4. (April 2008), pp. 548-561. by R. Batista, A. Boukerche, A. Demelo posted to algorithm alignment error-bound parallel by n00c on 2009-07-20 17:09:04 as along with 1 person operon
	Fast Semi-Local Alignment for DN Sequence Database Search [My Copy] Pattern Recognition, International Conference on, Vol. 3 (2002), 31019. by Yong S. Chen, Yi P. Hung, Chiou S. Fuh posted to algorithm alignment error-bound semi-global semi-local by n00c on 2009-07-20 16:37:56 as
	OASIS: An Online and Accurate Technique for Local-alignment Searches on Biological Sequences [My Copy] In In VLDB (2003), pp. 910-921. by Colin Meek, Jignesh M. Patel, Shruti Kasetty posted to algorithm alignment local oasis smith-waterman suffix-tree by n00c on 2009-07-19 23:07:01 as
	A Space-Economical Suffix Tree Construction Algorithm [My Copy] J. ACM, Vol. 23, No. 2. (1976), pp. 262-272. by Edward M. Mccreight posted to algorithm suffix tree by n00c on 2009-07-17 19:49:54 as

Note: You may cite this page as: http://www.citeulike.org/user/n00c/tag/algorithm

Result page: 1 2 Next

short-read	92
algorithm	85
software	69
map	51
genome	51
tool	51
snp	50
resequencing	45
alignment	45
sequencing	41
454	39
snp-discovery	33
assembly	29
snp-calling	28
rna-seq	27
illumina	23
solexa	23
review	20
data-structure	19
sequence	17
transcriptome	16
burrows-wheeler	15
tpgp	15
bayesian	14
string-matching	14
web-service	12
individual-human-genome	11
de-novo	11
visualization	11
pyrosequencing	11
mosaik	11
variant	11
abi	10
error-bound	10
solid	10
assembler	10
pipeline	10
indexing	10
repeats	9
viewer	9
bioinformatics	9
lcs	9
error-model	8
polybayes	8
comparison	8
suffix-tree	8
suffix-array	8
microarray	8
quality	8
base-calling	7
error	7
database	7
genomics	6
tandem	6
suffix	5
genotyping	5
jennifer-beane	5
li	5
cnv	5
multiplexing	5
seqman	5
methods	5
tree	5
variation	5
graph	5
dna	5
presentation	5
gigabayes	5
library	5
web	5
paired-end	4
compression	4
coverage	4
structure	4
pool-design	4
polymorphism	4
venter	4
bu	4
machine-learning	4
sff	4
pool	4
fm-index	4
color-space	4
sv	4
cloud-computing	4
clc	4
tandem-repeats	4
enhanced-suffix-array	4
book	4
text	4
bowtie	4
copy-number	3
r	3
data	3
vishkin	3
browser	3
research	3
maq	3
bacterial	3
differential-gene-expression	3
3rd-generation	3
de-brujin	3
ssahasnp	3
workflow	3
nqs	3
pyrobayes	3
soapsnp	3
open-source	3
landau	3
statistics	3
space	3
newbler	3
lbi	3
variant-calling	3
durbin	2
dbsnp	2
low-complexity	2
tfs	2
bias	2
allpaths	2
enrichment	2
ace	2
nussinov	2
pdf	2
est	2
bioconductor	2
apple	2
tutorial	2
annotation	2
multiple-alignment	2
cplusplus	2
bloom-filter	2
np-complete	2
registry	2
methodology	2
virus	2
segemehl	2
mapping	2
rolexa	2
organization	2
report	2
novosnp	2
seed	2
leukemia	2
single-molecule	2
linux	2
gpu	2
technology	2
bwa	2
helicos	2
capture	2
erange	2
bumc	2
venn-diagram	2
gene-expression	2
aml	2
waxman	2
asian	2
huref	2
mouse	2
eulerian	2
biomoby	2
hapmap	2
validation	2
human	2
combinatorics	2
haskell	2
nd	2
structural-variation	2
gff	2
rmap	2
ssaha2	2
watson	2
liver	2
graph-theory	2
soap	2
dust	2
nakatsu	2
user-group	2
flowgram	2
genetics	2
format	2
gwas	2
phred	2
paired-ends	2
sudoku	2
gui	2
lecroq	2
navarro	2
microbial_genetics	2
dibase	1
t-reks	1
zoom	1
perm	1
scs	1
probability	1
polyscan	1
haplosnper	1
trdb	1
sliding-window	1
sharcgs	1
global	1
splicing	1
genomemapper	1
crossbow	1
huffman	1
snpdetector	1
big-o	1
seqmap	1
nature	1
chemistry	1
rearrangment	1
mathworks	1
parallel	1
biohaskell	1
binding	1
detection	1
direct-rna-seq	1
alta-cyclic	1
consensus	1
clustering	1
csa	1
trapnell	1
ingap	1
javascript	1
maximum-likelihood	1
pacific-biosciences	1
textbook	1
snv	1
pass	1
depth-of-coverage	1
planet	1
survey	1
gastroenteritis	1
pooling	1
1000-genomes	1
soap2	1
reputer	1
pairwise	1
cap3	1
splice	1
pinesap	1
tools	1
mapper	1
arabidopsis	1
allpaths2	1
igraph	1
faq	1
pileup	1
genome-browser	1
gr-aligner	1
eagleview	1
shortread	1
misassembly	1
blast	1
roche	1
qsra	1
kautz-zeckendorf	1
breakdancer	1
sage	1
pooled	1
fastq	1
meeting	1
hash	1
patman	1
multiplex	1
asssembly	1
samtools	1
tagdust	1
casava	1
boyer-moore	1
matlab	1
haplotype	1
errors	1
file	1
semantic-web	1
stat5a	1
primer	1
array	1
alphabet	1
seqan	1
snp-o-matic	1
local	1
subsequence	1
rna	1
k-means	1
disorder	1
mom	1
datamining	1
inference	1
ncbi	1
exonerate	1
asymptotic	1
bachmann-landau	1
cluster	1
windowmasker	1
hawkeye	1
genetic_association_studies	1
forage	1
pindel	1
firefox	1
order	1
minisatellites	1
mendeley	1
ebi	1
gap	1
palindromes	1
difference	1
varscan	1
novosnp3	1
nimblegen	1
exome	1
indel	1
yh	1
plugin	1
f-seq	1
framework	1
web-server	1
tview	1
laboratory	1
subquadratic	1
mrfast	1
shrimp	1
ngsview	1
ucsc	1
target-region	1
polyfreq	1
pemer	1
hirschberg	1
factor-oracle	1
toolkit	1
pruning	1
euler	1
q-gram	1
piqa	1
unofficial	1
dynamic-programming	1
tile	1
sff_extract	1
toronto-2008	1
semantic	1
pachter	1
smith-waterman	1
population	1
myexperiment	1
heatmap	1
bwt-sw	1
findpeaks	1
hunt-szymanski	1
mvf	1
iphone	1
bustard	1
trf	1
sam	1
semi-global	1
gnumap	1
oslay	1
bfast	1
yoruba	1
galign	1
set	1
links	1
2nd-generation	1
shore	1
supplementary-information	1
personal-genomics	1
cloudburst	1
gamma-distribution	1
bank	1
ruby	1
junction	1
programming	1
bibliography	1
social	1
jbrowse	1
fm-kz	1
analysis	1
biomart	1
file-format	1
mutations	1
blat	1
conference	1
rna-mate	1
bound	1
connected-component	1
diagnostics	1
protocol	1
provenance	1
pet	1
mask	1
tophat	1
tileqc	1
barcoding	1
breakpoints	1
gsmapper	1
bwt	1
element	1
computer-science	1
function	1
greed	1
false-positive	1
mrna	1
genome-sequencer-flx	1
tandem-repeat-finder	1
lasergene	1
mapview	1
razers	1
avid	1
ssaha_pileup	1
string-scanning	1
mailing-list	1
lectures	1
lookseq	1
frequency	1
prediction	1
eland	1
swift	1
velvet	1
forum	1
in-silico	1
guide	1
finite-automaton	1
suffix-stree	1
papers	1
slider	1
plant	1
reps	1
cdna	1
consed	1
semi-local	1
cancer	1
snp-phage	1
genotyping-errors	1
mutation	1
color	1
probhd	1
scripting	1
myers	1
abyss	1
neural-network	1
ssaha	1
hnf4alpha	1
newsarticle	1
pts	1
mobyle	1
shorty	1
bayescall	1
mining	1
polymerase	1
python	1
notation	1
salzberg	1
cnv-seq	1
oasis	1
real-time	1
network	1
mummer	1
palma	1
sickle-cell	1
snp-discovert	1

n00c's algorithm [85 articles] Export

n00c's tags