n00c's genome [47 articles] Export

Recent papers added to n00c's library classified by the tag genome. You can also see everyone's genome.

	Simultaneous alignment of short reads against multiple genomes [My Copy] Genome Biology, Vol. 10, No. 9. (17 September 2009), R98. by Korbinian Schneeberger, Jorg Hagmann, Stephan Ossowski, et al.Norman Warthmann, Sandra Gesing, Oliver Kohlbacher, Detlef Weigel posted to short-read map genomemapper genome by n00c on 2009-11-24 23:05:35 as along with 12 people seninp darian maren megraw djkt fstrozzi jamselem justinhjohnson torfinnnome reyez natstreet druvus
	Initial sequencing and analysis of the human genome [My Copy] Nature, Vol. 409, No. 6822. (15 February 2001), pp. 860-921. posted to sequencing genome by n00c on 2009-11-24 22:47:03 as along with 38 people and 3 groups rshe timflutre bicko jmanning2k kentz humburg vplagnol mqbphcw3 ThomasDOtto psique timhubbard jo_davies daforerog taroleo micromassive wimufi sgoetz fisherp reyez bozdagd cthachuk Cortel dragonrez jnemecek gg Dax42 aprasad yas balajis xdeupi dullhunk dgront djkt olympos nagendraproj incovoma yoanjacquemin brant Proteinkinases T_lab LabCompMed
	BFAST: An Alignment Tool for Large Scale Genome Resequencing [My Copy] PLoS ONE, Vol. 4, No. 11. (11 November 2009), e7767. by Nils Homer, Barry Merriman, Stanley F. Nelson posted to tool software resequencing mapper map genome bfast alignment algorithm by n00c on 2009-11-18 22:33:20 as along with 5 people friendpine zwang druvus torfinnnome idonaldson
	The HuRef Browser: a web resource for individual human genomics [My Copy] Nucl. Acids Res., Vol. 37, No. Database issue. (26 November 2008), gkn939. by Nelson Axelrod, Yuan Lin, Pauline C. Ng, et al.Timothy B. Stockwell, Jonathan Crabtree, Jiaqi Huang, Ewen Kirkness, Robert L. Strausberg, Marvin E. Frazier, J. Craig Venter, Saul Kravitz, Samuel Levy posted to venter huref genome browser by n00c on 2009-11-09 21:40:24 as along with 3 people daforerog operon guhjy
	1000 Genomes project [My Copy] Nat Biotech, Vol. 26, No. 3. (01 March 2008), pp. 256-256. by Nayanah Siva posted to tpgp genome 1000-genomes by n00c on 2009-11-06 19:34:24 as along with 4 people balajis mqbphcw3 maralena psique
	Cataloging Coding Sequence Variations in Human Genome Databases [My Copy] PLoS ONE, Vol. 3, No. 10. (30 October 2008), e3575. by Hong-Hee Won, Hee-Jin Kim, Kyung-A Lee, Jong-Won Kim posted to variation tpgp sequence genome database by n00c on 2009-11-06 18:54:18 as along with 1 person daforerog
	The YH database: the first Asian diploid genome database [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D1025-1028. by Guoqing Li, Lijia Ma, Chao Song, et al.Zhentao Yang, Xiulan Wang, Hui Huang, Yingrui Li, Ruiqiang Li, Xiuqing Zhang, Huanming Yang, Jian Wang, Jun Wang posted to yh tpgp individual-human-genome genome database asian by n00c on 2009-11-06 18:49:27 as along with 1 person guhjy
	All about Craig: the first 'full' genome sequence [My Copy] Nature, Vol. 449, No. 7158. (05 September 2007), pp. 6-7. by Heidi Ledford posted to venter tpgp sequence individual-human-genome genome by n00c on 2009-11-06 18:47:30 as
	Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes [My Copy] Genome Research, Vol. 19, No. 7. (15 July 2009), pp. 1270-1278. by Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Sahinalp posted to variation structure sequencing genome combinatorics algorithm by n00c on 2009-11-06 17:06:53 as along with 17 people hzoltan rdiaz aezrin jandot GustavoLacerda guhjy jessopher megraw jonilaserson chrisamiller dandaman sameersoi djkt dakelley APRegier natstreet druvus
	Genome assembly forensics: finding the elusive mis-assembly [My Copy] Genome Biology, Vol. 9, No. 3. (14 March 2008), R55. by Adam Phillippy, Michael Schatz, Mihai Pop posted to misassembly genome assembly by n00c on 2009-11-06 17:05:47 as along with 10 people and 1 group Thaverkamp kiekyon dakelley jasontsai orzenil druvus fernan lp2 Neeperando GustavoLacerda DeNovoAssembly-SIMR
	Mobile elements create structural variation: Analysis of a complete human genome [My Copy] Genome Research, Vol. 19, No. 9. (13 September 2009), pp. 1516-1526. by Jinchuan Xing, Yuhua Zhang, Kyudong Han, et al.Abdel H. Salem, Shurjo K. Sen, Chad D. Huff, Qiong Zhou, Ewen F. Kirkness, Samuel Levy, Mark A. Batzer, Lynn B. Jorde posted to variation structure human genome element by n00c on 2009-11-06 17:04:35 as along with 10 people and 1 group operon djkt sameersoi APRegier dchughes fenghezi jandot Dulcinea natstreet JustinCrocker Journal picks
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, N. Alice Yamada, Peter Tsang, Tera L. Newman, Eray Tuzun, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin McKernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. McCarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted to variant structure sequencing mapping genome cnv by n00c on 2009-10-30 19:28:05 as along with 35 people and 2 groups hzoltan daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak matthewsuderman jfr hpaces Ema bpb dchughes djkt balicea shikin psique kintoki kaniko aprasad vplagnol maximilianh chrisamiller guhjy skoch3 GeneGo Koch_Lab
	Single-molecule sequencing of an individual human genome [My Copy] Nature Biotechnology, Vol. 27, No. 9. (10 August 2009), pp. 847-850. by Dmitry Pushkarev, Norma F. Neff, Stephen R. Quake posted to single-molecule individual-human-genome helicos genome 3rd-generation by n00c on 2009-10-28 23:04:32 as along with 25 people and 3 groups JamesBarger ethanmj MurphysLab leliavski inesdesantiago fenghezi megraw kintoki neils daforerog gangcai mqbphcw3 jmanning2k jonilaserson druvus alexknight qayub natstreet mtagaya kinestetika guhjy installe psique SeaBird danmaclean Journal picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen Bioinformatics
	Recurring mutations found by sequencing an acute myeloid leukemia genome. [My Copy] The New England journal of medicine, Vol. 361, No. 11. (10 September 2009), pp. 1058-1066. by Elaine R. Mardis, Li Ding, David J. Dooling, et al.David E. Larson, Michael D. McLellan, Ken Chen, Daniel C. Koboldt, Robert S. Fulton, Kim D. Delehaunty, Sean D. McGrath, Lucinda A. Fulton, Devin P. Locke, Vincent J. Magrini, Rachel M. Abbott, Tammi L. Vickery, Jerry S. Reed, Jody S. Robinson, Todd Wylie, Scott M. Smith, Lynn Carmichael, James M. Eldred, Christopher C. Harris, Jason Walker, Joshua B. Peck, Feiyu Du, Adam F. Dukes, Gabriel E. Sanderson, Anthony M. Brummett, Eric Clark, Joshua F. McMichael, Rick J. Meyer, Jonathan K. Schindler, Craig S. Pohl, John W. Wallis, Xiaoqi Shi, Ling Lin, Heather Schmidt, Yuzhu Tang, Carrie Haipek, Madeline E. Wiechert, Jolynda V. Ivy, Joelle Kalicki, Glendoria Elliott, Rhonda E. Ries, Jacqueline E. Payton, Peter Westervelt, Michael H. Tomasson, Mark A. Watson, Jack Baty, Sharon Heath, William D. Shannon, Rakesh Nagarajan, Daniel C. Link, Matthew J. Walter, Timothy A. Graubert, John F. DiPersio, Richard K. Wilson, Timothy J. Ley posted to tpgp mutation leukemia individual-human-genome genome aml by n00c on 2009-10-28 22:54:37 as along with 8 people and 2 groups absterga woodson8 fenghezi ericsuh polivares prensner frohike jbhiatt JLab BergmanLab
	DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome [My Copy] Nature, Vol. 456, No. 7218. (06 November 2008), pp. 66-72. by Timothy J. Ley, Elaine R. Mardis, Li Ding, et al.Bob Fulton, Michael D. McLellan, Ken Chen, David Dooling, Brian H. Dunford-Shore, Sean McGrath, Matthew Hickenbotham, Lisa Cook, Rachel Abbott, David E. Larson, Dan C. Koboldt, Craig Pohl, Scott Smith, Amy Hawkins, Scott Abbott, Devin Locke, LaDeana W. Hillier, Tracie Miner, Lucinda Fulton, Vincent Magrini, Todd Wylie, Jarret Glasscock, Joshua Conyers, Nathan Sander, Xiaoqi Shi, John R. Osborne, Patrick Minx, David Gordon, Asif Chinwalla, Yu Zhao, Rhonda E. Ries, Jacqueline E. Payton, Peter Westervelt, Michael H. Tomasson, Mark Watson, Jack Baty, Jennifer Ivanovich, Sharon Heath, William D. Shannon, Rakesh Nagarajan, Matthew J. Walter, Daniel C. Link, Timothy A. Graubert, John F. DiPersio, Richard K. Wilson posted to tpgp sequence leukemia individual-human-genome genome aml by n00c on 2009-10-28 22:52:15 as along with 16 people tommcdonagh jonilaserson jessopher frohike jfr vmsr yupu kentsis suteedee lewista reyez caseybrown pkonings rodney davfre djkt
	A highly annotated whole-genome sequence of a Korean individual [My Copy] Nature, Vol. advance online publication, No. 7258. (08 July 2009), pp. 1011-1015. by Jong-Il Kim, Young S. Ju, Hansoo Park, et al.Sheehyun Kim, Seonwook Lee, Jae-Hyuk Yi, Joann Mudge, Neil A. Miller, Dongwan Hong, Callum J. Bell, Hye-Sun Kim, In-Soon Chung, Woo-Chung Lee, Ji-Sun Lee, Seung-Hyun Seo, Ji-Young Yun, Hyun N. Woo, Heewook Lee, Dongwhan Suh, Seungbok Lee, Hyun-Jin Kim, Maryam Yavartanoo, Minhye Kwak, Ying Zheng, Mi K. Lee, Hyunjun Park, Jeong Y. Kim, Omer Gokcumen, Ryan E. Mills, Alexander W. Zaranek, Joseph Thakuria, Xiaodi Wu, Ryan W. Kim, Jim J. Huntley, Shujun Luo, Gary P. Schroth, Thomas D. Wu, HyeRan Kim, Kap-Seok Yang, Woong-Yang Park, Hyungtae Kim, George M. Church, Charles Lee, Stephen F. Kingsmore, Jeong-Sun Seo posted to tpgp sequence individual-human-genome genome by n00c on 2009-10-28 22:49:41 as along with 8 people and 1 group fenghezi nicolesoranzo mtagaya reyez pkonings psique djkt jbhiatt Journal picks
	The first Korean genome sequence and analysis: Full genome sequencing for a socio-ethnic group [My Copy] Genome Research, Vol. 19, No. 9. (24 September 2009), pp. 1622-1629. by Sung-Min Ahn, Tae-Hyung Kim, Sunghoon Lee, et al.Deokhoon Kim, Ho Ghang, Dae-Soo Kim, Byoung-Chul Kim, Sang-Yoon Kim, Woo-Yeon Kim, Chulhong Kim, Daeui Park, Yong S. Lee, Sangsoo Kim, Rohit Reja, Sungwoong Jho, Chang G. Kim, Ji-Young Cha, Kyung-Hee Kim, Bonghee Lee, Jong Bhak, Seong-Jin Kim posted to tpgp sequence individual-human-genome genome by n00c on 2009-10-28 22:46:48 as along with 5 people and 1 group ppgardne djkt fenghezi jessopher daforerog Journal picks
	The diploid genome sequence of an Asian individual. [My Copy] Nature, Vol. 456, No. 7218. (6 November 2008), pp. 60-65. by Jun Wang, Wei Wang, Ruiqiang Li, et al.Yingrui Li, Geng Tian, Laurie Goodman, Wei Fan, Junqing Zhang, Jun Li, Juanbin Zhang, Yiran Guo, Binxiao Feng, Heng Li, Yao Lu, Xiaodong Fang, Huiqing Liang, Zhenglin Du, Dong Li, Yiqing Zhao, Yujie Hu, Zhenzhen Yang, Hancheng Zheng, Ines Hellmann, Michael Inouye, John Pool, Xin Yi, Jing Zhao, Jinjie Duan, Yan Zhou, Junjie Qin, Lijia Ma, Guoqing Li, Zhentao Yang, Guojie Zhang, Bin Yang, Chang Yu, Fang Liang, Wenjie Li, Shaochuan Li, Dawei Li, Peixiang Ni, Jue Ruan, Qibin Li, Hongmei Zhu, Dongyuan Liu, Zhike Lu, Ning Li, Guangwu Guo, Jianguo Zhang, Jia Ye, Lin Fang, Qin Hao, Quan Chen, Yu Liang, Yeyang Su, A. San, Cuo Ping, Shuang Yang, Fang Chen, Li Li, Ke Zhou, Hongkun Zheng, Yuanyuan Ren, Ling Yang, Yang Gao, Guohua Yang, Zhuo Li, Xiaoli Feng, Karsten Kristiansen, Gane K. Wong, Rasmus Nielsen, Richard Durbin, Lars Bolund, Xiuqing Zhang, Songgang Li, Huanming Yang, Jian Wang posted to tpgp sequence individual-human-genome genome asian by n00c on 2009-10-28 20:16:15 as along with 15 people rshe fenghezi jonilaserson kmdaily daforerog jessopher dakelley vmsr psique GustavoLacerda reyez guhjy caseybrown pkonings djkt
	The Diploid Genome Sequence of an Individual Human [My Copy] PLoS Biol, Vol. 5, No. 10. (4 September 2007), e254. by Samuel Levy, Granger Sutton, Pauline C. Ng, et al.Lars Feuk, Aaron L. Halpern, Brian P. Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F. Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R. MacDonald, Andy W. Pang, Mary Shago, Timothy B. Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A. Kravitz, Dana A. Busam, Karen Y. Beeson, Tina C. McIntosh, Karin A. Remington, Josep F. Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E. Frazier, Stephen W. Scherer, Robert L. Strausberg, J. Craig Venter posted to venter tpgp sequence individual-human-genome genome by n00c on 2009-10-28 20:14:44 as along with 30 people and 1 group jgill pachorip Scis0000002 daforerog jessopher psique dakelley noushin jo_davies frohike adijr Neeperando operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs xingxu hpaces maburkitt nhp Bioinformatics
	ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads [My Copy] Genome Biology, Vol. 10, No. 10. (1 October 2009), R103. by Iain MacCallum, Dariusz Przybylski, Sante Gnerre, et al.Joshua Burton, Ilya Shlyakhter, Andreas Gnirke, Joel Malek, Kevin McKernan, Swati Ranade, Terrance Shea, Louise Williams, Sarah Young, Chad Nusbaum, David Jaffe posted to short-read paired-end genome de-brujin bacterial assembly allpaths2 allpaths by n00c on 2009-10-28 13:10:39 as along with 10 people and 1 group djkt azazello dakelley jgill GustavoLacerda ramonvidal justinhjohnson stajich druvus neils Mycology
	Diploid Human Genome Browser \| HuRef 1.0 \| Home [My Copy] posted to venter huref human genome browser by n00c on 2009-10-20 22:48:21 as
	Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing [My Copy] Plant Biotechnology Journal, Vol. 7, No. 4. (May 2009), pp. 347-354. by Peter C. Bundock, Frances G. Eliott, Gary Ablett, et al.Adam D. Benson, Rosanne E. Casu, Karen S. Aitken, Robert J. Henry posted to snp-discovery snp sequencing polybayes plant genome 454 by n00c on 2009-10-01 16:17:51 as along with 2 people orzenil natstreet
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice FranÃ§ois, Laurent Farinelli, Magne Ãsterã¥s, Jacques Schrenzel posted to short-read sequencing genome de-novo bacterial assembly by n00c on 2009-10-01 16:16:31 as along with 15 people and 4 groups GeeSharpMinor pachorip operon druvus dakelley acn nmohelli GustavoLacerda jmeppley stajich azazello Katje iris42 balicea Neeperando DeNovoAssembly-SIMR microbiology_nijmegen Mycology gatech-compgenomics
	Genome assembly reborn: recent computational challenges [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 354-366. by Mihai Pop posted to review genome assembly by n00c on 2009-09-29 16:28:13 as along with 30 people and 1 group jfr hzoltan cthachuk GustavoLacerda agbiotec shabhonam pachorip APRegier jmcq stevebs jonilaserson michaelbarton inesdesantiago GeeSharpMinor bertelsen aprasad ananta_samudra sandfire jmeppley mlangill fgibson ppgardne TRHvidsten pengchy robsyme nuin kiekyon natstreet druvus idoerg Journal picks
	Accurate whole human genome sequencing using reversible terminator chemistry. [My Copy] Nature, Vol. 456, No. 7218. (6 November 2008), pp. 53-59. by David R. Bentley, Shankar Balasubramanian, Harold P. Swerdlow, et al.Geoffrey P. Smith, John Milton, Clive G. Brown, Kevin P. Hall, Dirk J. Evers, Colin L. Barnes, Helen R. Bignell, Jonathan M. Boutell, Jason Bryant, Richard J. Carter, R. Keira Cheetham, Anthony J. Cox, Darren J. Ellis, Michael R. Flatbush, Niall A. Gormley, Sean J. Humphray, Leslie J. Irving, Mirian S. Karbelashvili, Scott M. Kirk, Heng Li, Xiaohai Liu, Klaus S. Maisinger, Lisa J. Murray, Bojan Obradovic, Tobias Ost, Michael L. Parkinson, Mark R. Pratt, Isabelle M. J. Rasolonjatovo, Mark T. Reed, Roberto Rigatti, Chiara Rodighiero, Mark T. Ross, Andrea Sabot, Subramanian V. Sankar, Aylwyn Scally, Gary P. Schroth, Mark E. Smith, Vincent P. Smith, Anastassia Spiridou, Peta E. Torrance, Svilen S. Tzonev, Eric H. Vermaas, Klaudia Walter, Xiaolin Wu, Lu Zhang, Mohammed D. Alam, Carole Anastasi, Ify C. Aniebo, David M. D. Bailey, Iain R. Bancarz, Saibal Banerjee, Selena G. Barbour, Primo A. Baybayan, Vincent A. Benoit, Kevin F. Benson, Claire Bevis, Phillip J. Black, Asha Boodhun, Joe S. Brennan, John A. Bridgham, Rob C. Brown, Andrew A. Brown, Dale H. Buermann, Abass A. Bundu, James C. Burrows, Nigel P. Carter, Nestor Castillo, Maria Chiara, Simon Chang, R. Neil Cooley, Natasha R. Crake, Olubunmi O. Dada, Konstantinos D. Diakoumakos, Belen Dominguez-Fernandez, David J. Earnshaw, Ugonna C. Egbujor, David W. Elmore, Sergey S. Etchin, Mark R. Ewan, Milan Fedurco, Louise J. Fraser, Karin V. Fuentes Fajardo, W. Scott Furey, David George, Kimberley J. Gietzen, Colin P. Goddard, George S. Golda, Philip A. Granieri, David E. Green, David L. Gustafson, Nancy F. Hansen, Kevin Harnish, Christian D. Haudenschild, Narinder I. Heyer, Matthew M. Hims, Johnny T. Ho, Adrian M. Horgan, Katya Hoschler, Steve Hurwitz, Denis V. Ivanov, Maria Q. Johnson, Terena James, T. A. Huw Jones, Gyoung-Dong Kang, Tzvetana H. Kerelska, Alan D. Kersey, Irina Khrebtukova, Alex P. Kindwall, Zoya Kingsbury, Paula I. Kokko-Gonzales, Anil Kumar, Marc A. Laurent, Cynthia T. Lawley, Sarah E. Lee, Xavier Lee, Arnold K. Liao, Jennifer A. Loch, Mitch Lok, Shujun Luo, Radhika M. Mammen, John W. Martin, Patrick G. McCauley, Paul McNitt, Parul Mehta, Keith W. Moon, Joe W. Mullens, Taksina Newington, Zemin Ning, Bee L. Ng, Sonia M. Novo, Michael J. O'Neill, Mark A. Osborne, Andrew Osnowski, Omead Ostadan, Lambros L. Paraschos, Lea Pickering, Andrew C. Pike, Alger C. Pike, D. Chris Pinkard, Daniel P. Pliskin, Joe Podhasky, Victor J. Quijano, Come Raczy, Vicki H. Rae, Stephen R. Rawlings, Ana C. Rodriguez, Phyllida M. Roe, John Rogers, Maria C. Rogert Bacigalupo, Nikolai Romanov, Anthony Romieu, Rithy K. Roth, Natalie J. Rourke, Silke T. Ruediger, Eli Rusman, Raquel M. Sanches-Kuiper, Martin R. Schenker, Josefina M. Seoane, Richard J. Shaw, Mitch K. Shiver, Steven W. Short, Ning L. Sizto, Johannes P. Sluis, Melanie A. Smith, Jean Ernest Sohna Sohna, Eric J. Spence, Kim Stevens, Neil Sutton, Lukasz Szajkowski, Carolyn L. Tregidgo, Gerardo Turcatti, Stephanie vandeVondele, Yuli Verhovsky, Selene M. Virk, Suzanne Wakelin, Gregory C. Walcott, Jingwen Wang, Graham J. Worsley, Juying Yan, Ling Yau, Mike Zuerlein, Jane Rogers, James C. Mullikin, Matthew E. Hurles, Nick J. McCooke, John S. West, Frank L. Oaks, Peter L. Lundberg, David Klenerman, Richard Durbin, Anthony J. Smith posted to yoruba tpgp solexa resequencing maq individual-human-genome illumina genome eland by n00c on 2009-09-28 15:30:03 as along with 29 people and 1 group hzoltan rshe pst gbenson giovenko clearbluespring xingxu dna austin jessopher daforerog vmsr jfr azazello nuin usagi-kirin Archaeogenetics malcook psique tsherig jbhiatt pengchy reyez jmcq inesdesantiago ojabado caseybrown pkonings djkt SIMR bioinformatics
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted to short-read genome bacterial assembly assembler by n00c on 2009-09-28 15:27:39 as along with 17 people and 5 groups skembel operon michaelbarton azazello Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus vaulot djkt Katje stajich semrich BergmanLab Papers recommended by the Roscoff Plankton Group iSEEM microbiology_nijmegen Mycology
	Short read fragment assembly of bacterial genomes [My Copy] Genome Research, Vol. 18, No. 2. (1 February 2008), pp. 324-330. by Mark J. Chaisson, Pavel A. Pevzner posted to tool software short-read genome eulerian assembly assembler by n00c on 2009-09-28 15:23:30 as along with 17 people pachorip APRegier thegoose2 dakelley Neeperando hpaces idoerg druvus jasontsai acn orzenil azazello GustavoLacerda dandaman caseybrown iris42 tharris
	ssahaSNP A Polymorphism Detection Tool on a Whole Genome Scale [My Copy] 2005 IEEE Computational Systems Bioinformatics Conference - Workshops, Vol. 0 (2005), pp. 251-254. by Zemin Ning, Mario Caccamo, James C. Mullikin posted to tool ssahasnp software snp polymorphism genome by n00c on 2009-09-26 02:39:24 as
	Bayesian statistical methods for genetic association studies. [My Copy] Nature reviews. Genetics, Vol. 10, No. 10. (01 October 2009), pp. 681-690. by Matthew Stephens, David J. Balding posted to genome genetic_association_studies bayesian by n00c on 2009-09-21 23:27:27 as along with 24 people and 1 group welliegirl Geknitics shikin heliopais Zephyrus nuin matjes pkonings fastjoe23 guhjy maren gregdavisfromnj natstreet TRHvidsten zufar lwaldron megraw rdiaz kimorley leliavski misonneh qayub daforerog druvus Journal picks
	Origin of Saxitoxin Biosynthetic Genes in Cyanobacteria [My Copy] PLoS ONE, Vol. 4, No. 6. (1 June 2009), e5758. by Ahmed Moustafa, Jeannette E. Loram, Jeremiah D. Hackett, Donald M. Anderson, F. Gerald Plumley, Debashish Bhattacharya posted to seqman newbler genome 454 by n00c on 2009-09-21 23:14:59 as along with 1 person ahmedmoustafa
	Analyzing salt-marsh fungal diversity: comparing ARISA fingerprinting with clone sequencing and pyrosequencing [My Copy] Fungal Ecology, Vol. 2, No. 4. (November 2009), pp. 160-167. by Patrick M. Gillevet, Masoumeh Sikaroodi, Albert P. Torzilli posted to sequencing seqman pyrosequencing genome by n00c on 2009-09-21 23:09:28 as
	The Complete Genome Sequence of Escherichia coli DH10B: Insights into the Biology of a Laboratory Workhorse [My Copy] J. Bacteriol., Vol. 190, No. 7. (1 April 2008), pp. 2597-2606. by Tim Durfee, Richard Nelson, Schuyler Baldwin, et al.Guy Plunkett, Valerie Burland, Bob Mau, Joseph F. Petrosino, Xiang Qin, Donna M. Muzny, Mulu Ayele, Richard A. Gibbs, Balint Csorgo, Gyorgy Posfai, George M. Weinstock, Frederick R. Blattner posted to seqman genome by n00c on 2009-09-21 23:05:34 as along with 1 person austin
	Genomic Diversity and Evolution of Mycobacterium ulcerans Revealed by Next-Generation Sequencing [My Copy] PLoS Pathog, Vol. 5, No. 9. (11 September 2009), e1000580. by Weihong Qi, Michael Käser, Katharina Röltgen, Dorothy Yeboah-Manu, Gerd Pluschke posted to mosaik microbial_genetics genome by n00c on 2009-09-21 22:53:53 as along with 2 people druvus maren
	Next-generation sequencing of vertebrate experimental organisms. [My Copy] Mammalian genome : official journal of the International Mammalian Genome Society, Vol. 20, No. 6. (19 June 2009), pp. 327-338. by Daniel J. Turner, Thomas M. Keane, Ian Sudbery, David J. Adams posted to sequencing mosaik genome by n00c on 2009-09-21 22:43:30 as along with 6 people and 1 group jmcq guhjy jasontsai jessopher druvus AlexBateman Journal picks
	Disruption of LANA in Rhesus Rhadinovirus Generates a Highly Lytic Recombinant Virus [My Copy] J. Virol., Vol. 83, No. 19. (1 October 2009), pp. 9786-9802. by Kwun W. Wen, Dirk P. Dittmer, Blossom Damania posted to virus genomics genome clc by n00c on 2009-09-21 21:30:25 as
	Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 6. (10 February 2009), pp. 1886-1891. by Qi Zhao, Otavia L. Caballero, Samuel Levy, et al.Brian J. Stevenson, Christian Iseli, Sandro J. de Souza, Pedro A. Galante, Dana Busam, Margaret A. Leversha, Kalyani Chadalavada, Yu-Hui Rogers, J. Craig Venter, Andrew J. G. Simpson, Robert L. Strausberg posted to transcriptome newbler genomics genome clc cancer 454 by n00c on 2009-09-21 21:17:12 as along with 2 people stubrown xingxu
	Genomics made easier: An introductory tutorial to genome datamining [My Copy] Genomics, Vol. 93, No. 3. (4 March 2009), pp. 187-195. by Peter Schattner posted to tutorial tools software genomics genome datamining data by n00c on 2009-09-21 21:14:27 as along with 6 people jmeppley Thaverkamp druvus dullhunk idonaldson guhjy
	JBrowse: A next-generation genome browser [My Copy] Genome Research, Vol. 19, No. 9. (1 September 2009), pp. 1630-1638. by Mitchell E. Skinner, Andrew V. Uzilov, Lincoln D. Stein, Christopher J. Mungall, Ian H. Holmes posted to web visualization viewer tool software jbrowse javascript gff genome browser by n00c on 2009-09-17 23:59:31 as along with 28 people and 2 groups hzoltan darian mkiyer daforerog torfinnnome fenghezi djkt WXuan Zephyrus idonaldson pkonings inesdesantiago jcbarret jamselem aprasad urgi polivares cassj guhjy giovanni druvus natstreet fpattyn cisevol danmaclean timhubbard operon neils BergmanLab Journal picks
	REPuter: fast computation of maximal repeats in complete genomes [My Copy] Bioinformatics, Vol. 15, No. 5. (1 May 1999), pp. 426-427. by S. Kurtz, C. Schleiermacher posted to tandem-repeats reputer repeats palindromes genome by n00c on 2009-09-14 16:28:48 as along with 1 person ep161302
	Fast algorithms for large-scale genome alignment and comparison [My Copy] Nucl. Acids Res., Vol. 30, No. 11. (1 June 2002), pp. 2478-2483. by Arthur L. Delcher, Adam Phillippy, Jane Carlton, Steven L. Salzberg posted to tree mummer genome data-structure alignment algorithm by n00c on 2009-09-14 16:22:58 as along with 6 people umit treangen urgi yoanjacquemin bozdagd Neeperando
	Genome-wide analysis of single-nucleotide polymorphisms in human expressed sequences [My Copy] Nat Genet, Vol. 26, No. 2. (01 October 2000), pp. 233-236. by Kris Irizarry, Vlad Kustanovich, Cheng Li, et al.Nik Brown, Stanley Nelson, Wing Wong, Christopher J. Lee posted to snp-calling snp genome bayesian by n00c on 2009-09-13 07:13:33 as along with 1 person slevy03
	Maximum likelihood genome assembly. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 8. (August 2009), pp. 1101-1116. by Paul Medvedev, Michael Brudno posted to algorithm assembly genome maximum-likelihood by n00c on 2009-08-05 21:57:26 as along with 7 people dakelley nuin walshtp djkt natstreet druvus operon
	The complete genome of an individual by massively parallel DNA sequencing. [My Copy] Nature, Vol. 452, No. 7189. (17 April 2008), pp. 872-876. by David A. Wheeler, Maithreyan Srinivasan, Michael Egholm, et al.Yufeng Shen, Lei Chen, Amy McGuire, Wen He, Yi-Ju Chen, Vinod Makhijani, G. Thomas Roth, Xavier Gomes, Karrie Tartaro, Faheem Niazi, Cynthia L. Turcotte, Gerard P. Irzyk, James R. Lupski, Craig Chinault, Xing-zhi Song, Yue Liu, Ye Yuan, Lynne Nazareth, Xiang Qin, Donna M. Muzny, Marcel Margulies, George M. Weinstock, Richard A. Gibbs, Jonathan M. Rothberg posted to watson tpgp snp resequencing pyrosequencing individual-human-genome genome 454 by n00c on 2009-07-28 18:47:35 as along with 23 people and 2 groups rshe jonilaserson jessopher daforerog behindtherabbit frohike reyez pengchy adijr jo_davies jfr orzenil dullhunk djkt ramensky psique caseybrown melting dbensasson bpb Neeperando Huub_odc guhjy parkinson's disease references microbiology_nijmegen
	EagleView: A genome assembly viewer for next-generation sequencing technologies [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1538-1543. by Weichun Huang, Gabor Marth posted to visualization viewer marth genome eagleview assembly ace by n00c on 2009-07-27 23:42:46 as along with 15 people Thaverkamp imaginatio hpaces darian xingxu natstreet abizar druvus balicea bcondon fpattyn APRegier Neeperando GustavoLacerda guhjy
	Annotating genomes with massive-scale RNA sequencing. [My Copy] Genome biology, Vol. 9, No. 12. (2008), R175. by France Denoeud, Jean-Marc M. Aury, Corinne Da Silva, et al.Benjamin Noel, Odile Rogier, Massimo Delledonne, Michele Morgante, Giorgio Valle, Patrick Wincker, Claude Scarpelli, Olivier Jaillon, François Artiguenave posted to annotation genome methodology rna-seq short-read by n00c on 2009-07-26 19:35:21 as along with 20 people and 1 group hzoltan cthachuk GustavoLacerda jamselem jonilaserson ghattem nlapalu jmcq dandaman abizar dakelley inesdesantiago mhamada pengchy balicea fhalbrit GeeSharpMinor natstreet druvus neils SIMR bioinformatics
	PALMA: mRNA to genome alignments using large margin algorithms [My Copy] Bioinformatics, Vol. 23, No. 15. (1 August 2007), pp. 1892-1900. by Uta Schulze, Bettina Hepp, Cheng S. Ong, Gunnar Ratsch posted to alignment genome mrna palma by n00c on 2009-07-12 17:12:45 as along with 6 people and 1 group thegoose2 natstreet druvus tharris cjeans GustavoLacerda C. elegans / WormBase
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted to compression difference genome by n00c on 2009-06-30 20:50:54 as along with 26 people and 3 groups daforerog hzoltan idonaldson kshameer operon guhjy druvus dnewburger djkt mmartin sobolevnrm jfr psique cisevol GeeSharpMinor neils dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley baker-group BergmanLab Bioinformatics

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