natstreet's ngs [63 articles] Export

Recent papers added to natstreet's library classified by the tag ngs. You can also see everyone's ngs.

	Parallel short sequence assembly of transcriptomes [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009), S14. by Benjamin Jackson, Patrick Schnable, Srinivas Aluru posted to ngs de-novo assembly by natstreet on 2009-11-12 11:57:50 as along with 2 people Scis0000002 dakelley
	Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays [My Copy] Science (5 November 2009), 1181498. by Radoje Drmanac, Andrew B. Sparks, Matthew J. Callow, et al.Aaron L. Halpern, Norman L. Burns, Bahram G. Kermani, Paolo Carnevali, Igor Nazarenko, Geoffrey B. Nilsen, George Yeung, Fredrik Dahl, Andres Fernandez, Bryan Staker, Krishna P. Pant, Jonathan Baccash, Adam P. Borcherding, Anushka Brownley, Ryan Cedeno, Linsu Chen, Dan Chernikoff, Alex Cheung, Razvan Chirita, Benjamin Curson, Jessica C. Ebert, Coleen R. Hacker, Robert Hartlage, Brian Hauser, Steve Huang, Yuan Jiang, Vitali Karpinchyk, Mark Koenig, Calvin Kong, Tom Landers, Catherine Le, Jia Liu, Celeste E. McBride, Matt Morenzoni, Robert E. Morey, Karl Mutch, Helena Perazich, Kimberly Perry, Brock A. Peters, Joe Peterson, Charit L. Pethiyagoda, Kaliprasad Pothuraju, Claudia Richter, Abraham M. Rosenbaum, Shaunak Roy, Jay Shafto, Uladzislau Sharanhovich, Karen W. Shannon, Conrad G. Sheppy, Michel Sun, Joseph V. Thakuria, Anne Tran, Dylan Vu, Alexander W. Zaranek, Xiaodi Wu, Snezana Drmanac, Arnold R. Oliphant, William C. Banyai, Bruce Martin, Dennis G. Ballinger, George M. Church, Clifford A. Reid posted to ngs by natstreet on 2009-11-11 06:45:18 as along with 12 people and 1 group JonD qayub sandfire daforerog Peiyong chvlyl JamesBarger heliopais rwst orzenil zufar frohike Journal picks
	Sense from sequence reads: methods for alignment and assembly [My Copy] Nat Meth, Vol. 6, No. 11s. (15 November 2009), pp. S6-S12. by Paul Flicek, Ewan Birney posted to ngs mapping alignment by natstreet on 2009-11-04 07:31:37 as along with 13 people and 1 group pst owenlancaster robertrentzsch oannes74 Thaverkamp jasontsai seb1 druvus chvlyl GeeSharpMinor n00c venancio desany Orengo Group Journal Picks
	BARCRAWL and BARTAB: Software tools for the design and implementation of barcoded primers for highly multiplexed DNA sequencing [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (29 October 2009), 362. by Daniel Frank posted to ngs barcode by natstreet on 2009-11-04 07:30:35 as along with 4 people and 1 group druvus MarkFiers ppgardne heliopais Journal picks
	inGAP: an integrated next-generation genome analysis pipeline [My Copy] Bioinformatics (30 October 2009), btp615. by Ji Qi, Fangqing Zhao, Anne Buboltz, Stephan C. Schuster posted to software snp ngs indel by natstreet on 2009-11-04 07:22:01 as along with 4 people jasontsai n00c heliopais druvus
	RePS: a sequence assembler that masks exact repeats identified from the shotgun data. [My Copy] Genome research, Vol. 12, No. 5. (1 May 2002), pp. 824-831. by Jun Wang, Gane Ka-Shu K. Wong, Peixiang Ni, et al.Yujun Han, Xiangang Huang, Jianguo Zhang, Chen Ye, Yong Zhang, Jianfei Hu, Kunlin Zhang, Xin Xu, Lijuan Cong, Hong Lu, Xide Ren, Xiaoyu Ren, Jun He, Lin Tao, Douglas A. Passey, Jian Wang, Huanming Yang, Jun Yu, Songgang Li posted to ngs combined-assembly assembly by natstreet on 2009-11-02 16:41:55 as along with 3 people seb1 n00c orzenil
	Genome-wide mapping of alternative splicing in Arabidopsis thaliana [My Copy] Genome Research (26 October 2009) by Sergei A. Filichkin, Henry D. Priest, Scott A. Givan, et al.Rongkun Shen, Douglas W. Bryant, Samuel E. Fox, Weng-Keen Wong, Todd C. Mockler posted to rnaseq ngs alternative-splicing by natstreet on 2009-10-27 08:15:06 as along with 4 people cajunsushi bpcusack kshameer GeeSharpMinor
	DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. [My Copy] Bioinformatics (Oxford, England) (24 October 2009), btp612. by Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xuegong Zhang posted to rnaseq r ngs by natstreet on 2009-10-26 13:40:07 as along with 7 people hzoltan ramonvidal jmeppley heliopais GeeSharpMinor juokcho druvus
	SOAP2: an improved ultrafast tool for short read alignment [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1966-1967. by Ruiqiang Li, Chang Yu, Yingrui Li, et al.Tak-Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang posted to paired-end ngs mapping alignment by natstreet on 2009-10-26 09:04:57 as along with 26 people and 6 groups hzoltan agbiotec torfinnnome cthachuk jforment GustavoLacerda adijr bozdagd stubrown polivares guhjy ollieredfernwork operon cassj adamjamesreid Stew jamselem dswan idonaldson TRHvidsten humburg djkt farhat n00c jmeppley druvus Bioinformatics Core Service BergmanLab Orengo Group Journal Picks Bioinformatics - CRUK Bioinformatics Journal picks
	Updates to the RMAP short-read mapping software [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2841-2842. by Andrew D. Smith, Wen-Yu Chung, Emily Hodges, et al.Jude Kendall, Greg Hannon, James Hicks, Zhenyu Xuan, Michael Q. Zhang posted to paired-end ngs mapping by natstreet on 2009-10-26 08:15:50 as along with 8 people and 1 group seb1 darian djkt rtogawa idonaldson heliopais n00c druvus Journal picks
	Large-scale SNP genotyping in crosses between outbred lines: how useful is it\|[quest]\| [My Copy] Heredity (21 October 2009) by M. C. Ledur, N. Navarro, M. Perez-Enciso posted to snp pooled ngs gwa by natstreet on 2009-10-24 16:06:43 as along with 1 person druvus
	Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 479. by Hindrik Kerstens, Richard Crooijmans, Albertine Veenendaal, et al.Bert Dibbits, Thomas Chin, Johan den Dunnen, Martien Groenen posted to snp ngs by natstreet on 2009-10-20 13:31:50 as
	Characterizing natural variation using next-generation sequencing technologies [My Copy] Trends in Genetics, Vol. 25, No. 10. (02 October 2009), pp. 463-471. by Yoav Gilad, Jonathan K. Pritchard, Kevin Thornton posted to ngs association-mapping association by natstreet on 2009-10-19 07:18:35 as along with 5 people and 1 group operon jwfoley skembel djkt n00c iSEEM
	miRExpress: Analyzing high-throughput sequencing data for profiling microRNA expression [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (12 October 2009), 328. by Wei C. Wang, Feng M. Lin, Wen C. Chang, Kuan Y. Lin, Hsien Da Huang, Na S. Lin posted to software ngs mirna db by natstreet on 2009-10-13 11:43:50 as along with 5 people and 1 group mmartin GeeSharpMinor ealloza heliopais druvus microRNA
	Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome [My Copy] BMC Genomics, Vol. 9, No. 1. (2008), 404. by Nicole Quinn, Natasha Levenkova, William Chow, et al.Pascal Bouffard, Keith Boroevich, James Knight, Thomas Jarvie, Krzysztof Lubieniecki, Brian Desany, Ben Koop, Timothy Harkins, William Davidson posted to ngs assembly by natstreet on 2009-10-07 16:24:51 as along with 4 people seb1 druvus orzenil neils
	The phusion assembler. [My Copy] Genome research, Vol. 13, No. 1. (January 2003), pp. 81-90. by James C. Mullikin, Zemin Ning posted to ngs assembly by natstreet on 2009-10-05 12:50:54 as along with 5 people druvus bpb wenhan dmc azazello
	Rapid inexpensive genome-wide association using pooled whole blood. [My Copy] Genome research, Vol. 19, No. 11. (3 October 2009), pp. 2075-2080. by Jamie E. Craig, Alex W. Hewitt, Amy E. McMellon, et al.Anjali K. Henders, Lingjun Ma, Leanne Wallace, Shiwani Sharma, Kathryn P. Burdon, Peter M. Visscher, Grant W. Montgomery, Stuart Macgregor posted to pooled ngs association-mapping by natstreet on 2009-10-05 12:50:05 as along with 5 people daforerog neils giovanni rdiaz merpublic
	Personalized copy number and segmental duplication maps using next-generation sequencing. [My Copy] Nature genetics, Vol. 41, No. 10. (30 October 2009), pp. 1061-1067. by Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, et al.Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler posted to ngs cnv by natstreet on 2009-09-30 07:58:47 as along with 30 people and 1 group ongenetics chvlyl leemachado daed gbenson n00c bozdagd dakelley sbmontgomery eshirdel merpublic shyamsg scmelton qayub fenghezi Annab djkt nuin xingxu jamesmorris rdiaz brant torfinnnome jandot pkonings danmaclean daforerog frohike rschulz gangcai Journal picks
	Allele-specific DNA methylation in mouse strains is mainly determined by cis-acting sequences [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2028-2035. by Elmar Schilling, Carol El Chartouni, Michael Rehli posted to ngs methylation allele-specific by natstreet on 2009-09-30 07:39:01 as along with 4 people djkt bpcusack sebastien_vigneau rschulz
	RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2615-2616. by Nicole Cloonan, Qinying Xu, Geoffrey J. Faulkner, et al.Darrin F. Taylor, Dave T. P. Tang, Gabriel Kolle, Sean M. Grimmond posted to software rnaseq ngs by natstreet on 2009-09-29 17:26:32 as along with 14 people and 1 group hzoltan idonaldson cthachuk ethanmj cassj GeeSharpMinor sbmontgomery shyamsg dswan druvus samgj n00c guhjy GustavoLacerda Journal picks
	galign: A Tool for Rapid Genome Polymorphism Discovery [My Copy] PLoS ONE, Vol. 4, No. 9. (25 September 2009), e7188. by Shai Shaham posted to software snp polymorphism ngs by natstreet on 2009-09-29 17:26:11 as along with 7 people and 1 group maren scmelton Benedikt_Zimmermann n00c torfinnnome druvus stajich Mycology
	Next-generation DNA sequencing techniques [My Copy] New Biotechnology, Vol. 25, No. 4. (03 April 2009), pp. 195-203. by Wilhelm J. Ansorge posted to ngs by natstreet on 2009-09-26 14:07:18 as along with 7 people inesdesantiago heliopais druvus guhjy n00c svenrahmann ImranRaoufMalik
	Next-generation DNA sequencing methods. [My Copy] Annual review of genomics and human genetics, Vol. 9, No. 1. (19 June 2008), pp. 387-402. by Elaine R. Mardis posted to ngs by natstreet on 2009-09-26 14:06:39 as along with 15 people rshe heliopais daforerog stsaft n00c druvus Vincent_Rouilly Annab floatingpoint yupu LorraineThompson giovenko aheilbut reyez guhjy
	Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2865-2871. by Kai Ye, Marcel H. Schulz, Quan Long, Rolf Apweiler, Zemin Ning posted to paired-end ngs indel by natstreet on 2009-09-26 14:05:48 as along with 5 people torfinnnome dakelley n00c druvus vplagnol
	Finishing Repetitive Regions Automatically with Dupfinisher [My Copy] by Cliff S. Han, Patrick Chain posted to resequencing repeat ngs by natstreet on 2009-09-26 14:04:52 as along with 1 person druvus
	Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response. [My Copy] BMC genomics, Vol. 10, No. 1. (23 September 2009), 449. by Jingyu Zhang, Yunyuan Xu, Qing Huan, Kang Chong posted to srna ngs mirna by natstreet on 2009-09-24 07:20:07 as along with 3 people samgj neils druvus
	Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex [My Copy] Nature Methods, Vol. 5, No. 3. (10 February 2008), pp. 235-237. by Micah Hamady, Jeffrey J. Walker, J. Kirk Harris, Nicholas J. Gold, Rob Knight posted to ngs barcode by natstreet on 2009-09-22 12:55:22 as along with 10 people and 1 group druvus stubrown sandfire jlgreen jbhiatt skembel pdexheimer guhjy slevy03 sconlan iSEEM
	BreakDancer: an algorithm for high-resolution mapping of genomic structural variation [My Copy] Nature Methods, Vol. 6, No. 9. (09 August 2009), pp. 677-681. by Ken Chen, John W. Wallis, Michael D. McLellan, et al.David E. Larson, Joelle M. Kalicki, Craig S. Pohl, Sean D. McGrath, Michael C. Wendl, Qunyuan Zhang, Devin P. Locke, Xiaoqi Shi, Robert S. Fulton, Timothy J. Ley, Richard K. Wilson, Li Ding, Elaine R. Mardis posted to paired-end ngs indel by natstreet on 2009-09-22 12:54:29 as along with 12 people and 1 group Leaflet heliopais stubrown dakelley fenghezi daed druvus sitalange qayub gdb jasontsai danmaclean Journal picks
	Simultaneous alignment of short reads against multiple genomes [My Copy] Genome Biology, Vol. 10, No. 9. (17 September 2009), R98. by Korbinian Schneeberger, Jorg Hagmann, Stephan Ossowski, et al.Norman Warthmann, Sandra Gesing, Oliver Kohlbacher, Detlef Weigel posted to ngs comparative-genetics assembly alignment by natstreet on 2009-09-18 10:15:28 as along with 10 people darian maren megraw djkt fstrozzi jamselem justinhjohnson torfinnnome reyez druvus
	De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data. [My Copy] Genome biology, Vol. 10, No. 9. (2009), R94. by Scott Diguistini, Nancy Y. Liao, Darren Platt, et al.Gordon Robertson, Michael Seidel, Simon K. Chan, T. Roderick Docking, Inanc Birol, Robert A. Holt, Martin Hirst, Elaine Mardis, Marco A. Marra, Richard C. Hamelin, Jörg Bohlmann, Colette Breuil, Steven Jm J. Jones posted to ngs genome-assembly de-novo by natstreet on 2009-09-16 15:48:32 as along with 9 people and 2 groups GustavoLacerda sotacam gillianturgeon druvus jamselem sujaikumar kiekyon ppgardne stajich Journal picks Mycology
	Identifying regulatory elements in eukaryotic genomes [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 4. (1 July 2009), pp. 215-230. by Leelavati Narlikar, Ivan Ovcharenko posted to ngs motif chromatin chipseq by natstreet on 2009-09-14 09:05:47 as along with 3 people and 1 group daveGerrard ppgardne idonaldson Journal picks
	Fast mapping of short sequences with mismatches, insertions and deletions using index structures. [My Copy] PLoS computational biology, Vol. 5, No. 9. (11 September 2009), e1000502. by Steve Hoffmann, Christian Otto, Stefan Kurtz, et al.Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller posted to ngs alignment by natstreet on 2009-09-12 05:49:29 as along with 19 people and 4 groups cthachuk hzoltan darian nuin fenghezi behindtherabbit jandot walshtp torfinnnome stubrown dswan polivares orzenil djkt jmcq n00c heliopais ppgardne druvus Bioinformatics BergmanLab iSEEM Journal picks
	Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 374. by Andreia Amaral, Hendrik J. Megens, Hindrik Kerstens, et al.Henri Heuven, Bert Dibbits, Richard Crooijmans, Johan den Dunnen, Martien Groenen posted to snp ngs by natstreet on 2009-09-10 07:44:24 as along with 2 people jsatkosk danmaclean
	Complete Resequencing of 40 Genomes Reveals Domestication Events and Genes in Silkworm (Bombyx) [My Copy] Science, Vol. 326, No. 5951. (16 October 2009), pp. 433-436. by Qingyou Xia, Yiran Guo, Ze Zhang, et al.Dong Li, Zhaoling Xuan, Zhuo Li, Fangyin Dai, Yingrui Li, Daojun Cheng, Ruiqiang Li, Tingcai Cheng, Tao Jiang, Celine Becquet, Xun Xu, Chun Liu, Xingfu Zha, Wei Fan, Ying Lin, Yihong Shen, Lan Jiang, Jeffrey Jensen, Ines Hellmann, Si Tang, Ping Zhao, Hanfu Xu, Chang Yu, Guojie Zhang, Jun Li, Jianjun Cao, Shiping Liu, Ningjia He, Yan Zhou, Hui Liu, Jing Zhao, Chen Ye, Zhouhe Du, Guoqing Pan, Aichun Zhao, Haojing Shao, Wei Zeng, Ping Wu, Chunfeng Li, Minhui Pan, Jingjing Li, Xuyang Yin, Dawei Li, Juan Wang, Huisong Zheng, Wen Wang, Xiuqing Zhang, Songgang Li, Huanming Yang, Cheng Lu, Rasmus Nielsen, Zeyang Zhou, Jian Wang, Zhonghuai Xiang, Jun Wang posted to variation snp resequencing population ngs by natstreet on 2009-09-02 07:56:56 as along with 6 people and 2 groups venancio cisevol dinnes fstrozzi operon biomcgary BergmanLab Journal picks
	HAPLOWSER: a whole-genome haplotype browser for personal genome and metagenome [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2430-2431. by Jong H. Kim, Woo-Cheol Kim, Michael S. Waterman, Sanghyun Park, Lei M. Li posted to ngs haplotype genome-browser by natstreet on 2009-09-01 08:20:37 as along with 3 people dakelley djkt guhjy
	Assisted assembly: how to improve a de novo genome assembly by using related species [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R88. by Sante Gnerre, Eric Lander, Kerstin L. Toh, David Jaffe posted to shotgun ngs assembly by natstreet on 2009-08-30 15:36:11 as along with 17 people and 2 groups operon fstrozzi kiekyon torfinnnome dakelley jamselem err129 djkt darian APRegier thegoose danmaclean stajich neils druvus GustavoLacerda avilella Mycology Journal picks
	Benchmarking Next-Generation Transcriptome Sequencing for Functional and Evolutionary Genomics [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2731-2744. by John G. Gibbons, Eric M. Janson, Chris T. Hittinger, Mark Johnston, Patrick Abbot, Antonis Rokas posted to ngs by natstreet on 2009-08-26 10:10:13 as along with 7 people and 1 group djkt mlog kiekyon biomcgary GustavoLacerda stajich druvus Mycology
	Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants. [My Copy] PLoS computational biology, Vol. 5, No. 7. (10 July 2009), e1000432. by Jiang Du, Robert D. Bjornson, Zhengdong D. Zhang, Yong Kong, Michael Snyder, Mark B. Gerstein posted to ngs by natstreet on 2009-08-26 07:53:02 as along with 5 people operon nuin rdiaz dakelley guhjy
	Single-molecule sequencing of an individual human genome [My Copy] Nature Biotechnology, Vol. 27, No. 9. (10 August 2009), pp. 847-850. by Dmitry Pushkarev, Norma F. Neff, Stephen R. Quake posted to ngs by natstreet on 2009-08-19 08:00:02 as along with 25 people and 3 groups JamesBarger n00c ethanmj MurphysLab leliavski inesdesantiago fenghezi megraw kintoki neils daforerog gangcai mqbphcw3 jmanning2k jonilaserson druvus alexknight qayub mtagaya kinestetika guhjy installe psique SeaBird danmaclean Journal picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen Bioinformatics
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted to ngs genome-browser by natstreet on 2009-08-14 10:00:52 as along with 27 people and 2 groups hzoltan darian dakelley tonamswish inesdesantiago Thaverkamp idonaldson heliopais owhitney GustavoLacerda ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil operon guhjy kongl stajich n00c torfinnnome nuin kshameer neils druvus BergmanLab Mycology
	PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2514-2521. by Yangho Chen, Tade Souaiaia, Ting Chen posted to solid ngs mapping by natstreet on 2009-08-12 15:41:52 as along with 8 people and 1 group darian dswan operon fishtank polivares n00c torfinnnome druvus BergmanLab
	ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 19. (1 October 2009), pp. 2607-2608. by Martin Morgan, Simon Anders, Michael Lawrence, Patrick Aboyoun, Hervé Pagès, Robert Gentleman posted to ngs r software by natstreet on 2009-08-06 17:02:19 as along with 13 people and 1 group darian jforment fstrozzi rschulz djkt jmeppley dswan torfinnnome walshtp jamesmorris joaocarrico n00c druvus Bioinformatics Core Service
	Upcoming challenges for multiple sequence alignment methods in the high-throughput era [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2455-2465. by Carsten Kemena, Cedric Notredame posted to alignment ngs by natstreet on 2009-08-03 18:32:06 as along with 10 people and 2 groups fstrozzi manduca djkt rdiaz sjcockell torfinnnome walshtp nuin druvus ollieredfernwork Journal picks Orengo Group Journal Picks
	Maximum likelihood genome assembly. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 8. (August 2009), pp. 1101-1116. by Paul Medvedev, Michael Brudno posted to genome-assembly ngs by natstreet on 2009-08-03 18:31:48 as along with 7 people dakelley nuin walshtp djkt n00c druvus operon
	Comparison of next generation sequencing technologies for transcriptome characterization. [My Copy] BMC genomics, Vol. 10, No. 1. (1 August 2009), 347. by P. Kerr Wall, Jim Leebens-Mack, André S. Chanderbali, et al.Abdelali Barakat, Erik Wolcott, Haiying Liang, Lena Landherr, Lynn P. Tomsho, Yi Hu, John E. Carlson, Hong Ma, Stephan C. Schuster, Douglas E. Soltis, Pamela S. Soltis, Naomi Altman, Claude W. dePamphilis posted to ngs rnaseq by natstreet on 2009-08-03 18:31:17 as along with 19 people and 4 groups hzoltan daveGerrard daforerog feeldead n00c debasis jgill mqbphcw3 sotacam GustavoLacerda adamjamesreid dswan mlog gwallau ewilban1 ThomasDOtto jasontsai polivares druvus Journal picks Bioinformatics LabDros BergmanLab
	Mapping Accuracy of Short Reads from Massively Parallel Sequencing and the Implications for Quantitative Expression Profiling [My Copy] PLoS ONE, Vol. 4, No. 7. (28 July 2009), e6323. by Nicola Palmieri, Christian Schlötterer posted to ngs rnaseq by natstreet on 2009-07-30 12:41:58 as along with 16 people and 3 groups torfinnnome hzoltan darian debasis mqbphcw3 stubrown Thaverkamp PabloMarin jasontsai ThomasDOtto heliopais guhjy cisevol n00c druvus jbhiatt Journal picks JLab BergmanLab
	Microarray-based multicycle-enrichment of genomic subsets for targeted next-generation sequencing [My Copy] Genome Research, Vol. 19, No. 9. (28 September 2009), pp. 1616-1621. by Daniel Summerer, Haiguo Wu, Bettina Haase, et al.Yang Cheng, Nadine Schracke, Cord F. StÃ¤hler, Mark S. Chee, Peer F. StÃ¤hler, Markus Beier posted to ngs sequence-enrichment by natstreet on 2009-07-29 11:16:47 as along with 4 people xingxu torfinnnome guhjy jbhiatt
	Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding [My Copy] Genome Research, Vol. 19, No. 9. (22 September 2009), pp. 1527-1541. by Kevin J. McKernan, Heather E. Peckham, Gina L. Costa, et al.Stephen F. McLaughlin, Yutao Fu, Eric F. Tsung, Christopher R. Clouser, Cisyla Duncan, Jeffrey K. Ichikawa, Clarence C. Lee, Zheng Zhang, Swati S. Ranade, Eileen T. Dimalanta, Fiona C. Hyland, Tanya D. Sokolsky, Lei Zhang, Andrew Sheridan, Haoning Fu, Cynthia L. Hendrickson, Bin Li, Lev Kotler, Jeremy R. Stuart, Joel A. Malek, Jonathan M. Manning, Alena A. Antipova, Damon S. Perez, Michael P. Moore, Kathleen C. Hayashibara, Michael R. Lyons, Robert E. Beaudoin, Brittany E. Coleman, Michael W. Laptewicz, Adam E. Sannicandro, Michael D. Rhodes, Rajesh K. Gottimukkala, Shan Yang, Vineet Bafna, Ali Bashir, Andrew MacBride, Can Alkan, Jeffrey M. Kidd, Evan E. Eichler, Martin G. Reese, Francisco M. De La Vega, Alan P. Blanchard posted to ngs snp by natstreet on 2009-07-28 07:52:12 as along with 17 people hzoltan gbenson adijr chrisamiller heliopais daforerog druvus djkt psique sameersoi APRegier fenghezi jmanning2k xingxu pkonings n00c jandot
	De Novo Next Generation Sequencing of Plant Genomes [My Copy] Rice, Vol. 2, No. 1. (1 March 2009), pp. 35-43. by Steve Rounsley, Pradeep Marri, Yeisoo Yu, et al.Ruifeng He, Nick Sisneros, Jose Goicoechea, So Lee, Angelina Angelova, Dave Kudrna, Meizhong Luo, Jason Affourtit, Brian Desany, James Knight, Faheem Niazi, Michael Egholm, Rod Wing posted to ngs de-novo by natstreet on 2009-07-27 14:35:50 as along with 4 people ramonvidal GustavoLacerda druvus orzenil
	Argonaute HITS-CLIP decodes microRNA\|[ndash]\|mRNA interaction maps [My Copy] Nature, Vol. 460, No. 7254. (17 June 2009), pp. 479-486. by Sung W. Chi, Julie B. Zang, Aldo Mele, Robert B. Darnell posted to mirna ngs by natstreet on 2009-07-27 08:55:02 as along with 17 people and 3 groups hzoltan pattersonee heliopais guhjy hcoller stajich rschulz kongl gbloeb fenghezi diaz0058 gdb jbhiatt megraw tonamswish giovenko valeriehilgers Mycology Journal picks microRNA

Note: You may cite this page as: http://www.citeulike.org/user/natstreet/tag/ngs

Result page: 1 2 Next

ngs	63
leaf-shape	40
mirna	39
software	32
poplar	28
transcriptomics	15
db	14
de-novo	14
alignment	12
snp	12
network	11
r	10
repeat	10
assembly	8
qtl	8
srna	8
abiotic-stress	7
association-mapping	7
gwa	7
motif	7
rnaseq	7
comparative-genomics	6
genomics	6
herbivory	6
mapping	6
rt-pcr	6
sex	6
stress	6
allele-specific	5
aspen	5
association	5
gene-family	5
gene-prediction	5
methylation	5
ontology	5
paired-end	5
biotic-stress	4
drought	4
endophyte	4
genome-browser	4
natural-variation	4
review	4
synteny	4
aba	3
amirna	3
annotation	3
barcode	3
chromatin	3
dna-extraction	3
evolution	3
gene-expression	3
indel	3
leaf-development	3
meta-analysis	3
mod	3
ncrna	3
promoter	3
qpcr	3
serration	3
alternative-splicing	2
chemical-defense	2
climate	2
cnv	2
comparative-genetics	2
co-regulation	2
cross-species	2
development	2
differentiation	2
diversifying_selection	2
ectomycorrhizal_fungi	2
epigenetics	2
epiphyte	2
genome	2
genome-assembly	2
haplotype	2
heteroblasty	2
leaf-area	2
microarray	2
module	2
orthology	2
over-enrichment	2
phenotype	2
photosynthesis	2
polymorphism	2
pooled	2
proteomics	2
regulation	2
resequencing	2
rna-extraction	2
sirna	2
systems-biology	2
affy	1
analysis-method	1
apex	1
arf	1
assay	1
assisted-assembly	1
asymmetry	1
bioconductor	1
bioenergy	1
bioinformatics	1
biotic-stres	1
chemical-genetics	1
chipseq	1
cis-regulation	1
cis-variation	1
cnr	1
co-expression	1
combined-assembly	1
combined-profiling	1
community	1
conservation	1
degradome	1
dna-binding	1
duplication	1
elp	1
endoreduplication	1
epigenome	1
epigenomics	1
epistasis	1
eqtl	1
error-bars	1
est	1
format-conversion	1
gbrowse	1
gene-set	1
genetical-genomics	1
genome-rearrangement	1
go	1
graphs	1
gui	1
heterosis	1
hybrid	1
integrative-analysis	1
intergeneic	1
labwork	1
latitude	1
leaf-chemistry	1
leaf_primordium	1
linkage	1
meristem	1
metabolomics	1
motig	1
mutation	1
nbs-lrr	1
neofunctionalization	1
non-coding	1
nucleosome	1
omics	1
pathway	1
pca	1
phase-transistion	1
phenotypic_plasticity	1
phylogeny	1
physiognomy	1
pipeline	1
plasticity	1
polarity	1
polyploidy	1
population	1
regulon	1
ril	1
senescence	1
sequence-enrichment	1
shotgun	1
solid	1
splice-variant	1
strand-specific	1
subfunctionalization	1
swasp	1
transciptome	1
transponson	1
transposon	1
uv-b	1
variation	1
visualisation	1
volatiles	1
web-resource	1
whole-genome-alignment	1

natstreet's ngs [63 articles] Export

natstreet's tags