nedwards's library 612 articles Export

	Protein quantification across hundreds of experimental conditions [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15544-15548. by Zia Khan, Joshua S. Bloom, Benjamin A. Garcia, Mona Singh, Leonid Kruglyak posted to no-tag by nedwards on 2009-11-05 22:29:30 as along with 5 people brianb bennos tmmurali roys GeeSharpMinor
	Top-Down Identification of Protein Biomarkers in Bacteria with Unsequenced Genomes [My Copy] Analytical Chemistry, Vol. 0, No. 0. (0000) by Colin Wynne, Catherine Fenselau, Plamen A. Demirev, Nathan Edwards posted to top-down proteomics protein-identification prosight phylogenetic-analysis microorganism-identification by nedwards on 2009-11-05 22:20:30 as along with 1 person brianb
	Error-tolerant identification of peptides in sequence databases by peptide sequence tags. [My Copy] Analytical chemistry, Vol. 66, No. 24. (15 December 1994), pp. 4390-4399. by M. Mann, M. Wilm posted to no-tag by nedwards on 2009-11-03 20:31:58 as
	Shotgun proteomics: integrating technologies to answer biological questions. [My Copy] Current opinion in molecular therapeutics, Vol. 5, No. 3. (June 2003), pp. 302-309. by W. Hayes McDonald, John R. Yates posted to no-tag by nedwards on 2009-11-03 19:15:47 as
	Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics [My Copy] Physiol. Genomics, Vol. 33, No. 1. (8 October 2008), pp. 18-25. by Eric W. Deutsch, Henry Lam, Ruedi Aebersold posted to no-tag by nedwards on 2009-11-03 19:15:27 as along with 1 person guhjy
	Computational analysis of shotgun proteomics data [My Copy] Current Opinion in Chemical Biology In Proteomics and genomics, Vol. 9, No. 1. (February 2005), pp. 88-94. by M. Maccoss posted to no-tag by nedwards on 2009-11-03 18:58:36 as along with 1 person fishtank
	Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book [My Copy] Nature Methods, Vol. 1, No. 3. (18 November 2004), pp. 195-202. by Rovshan G. Sadygov, Daniel Cociorva, John R. Yates posted to no-tag by nedwards on 2009-11-03 18:57:34 as along with 1 person kallberg
	Protein Identification by Tandem Mass Spectrometry and Sequence Database Searching [My Copy] Mass Spectrometry Data Analysis in Proteomics, Vol. 367 (2007), pp. 87-119. by Alexey I. Nesvizhskii posted to no-tag by nedwards on 2009-11-03 18:42:44 as along with 2 people shikin fishtank
	Large-scale analysis of the yeast proteome by multidimensional protein identification technology [My Copy] Nature Biotechnology, Vol. 19, No. 3. (01 March 2001), pp. 242-247. by Michael P. Washburn, Dirk Wolters, John R. Yates posted to no-tag by nedwards on 2009-11-03 18:41:34 as along with 1 person and 1 group bala DictyosteliumGroup
	Mass spectrometry-based proteomics [My Copy] Nature, Vol. 422, No. 6928. (13 March 2003), pp. 198-207. by Ruedi Aebersold, Matthias Mann posted to no-tag by nedwards on 2009-11-03 18:28:35 as along with 9 people nzm emmackinnon jmeppley dgront frohike sverzijl olberd carlk taenneken
	N-Glycan Structure Annotation of Glycopeptides Using a Linearized Glycan Structure Database (GlyDB) [My Copy] Journal of Proteome Research, Vol. 6, No. 8. (1 August 2007), pp. 3162-3173. by Jian M. Ren, Tomas Rejtar, Lingyun Li, Barry L. Karger posted to no-tag by nedwards on 2009-10-25 23:14:21 as
	A mass spectrometry\|[ndash]\|friendly database for cSNP identification [My Copy] Nat Meth, Vol. 4, No. 6. (01 June 2007), pp. 465-466. by Soren Schandorff, Jesper V. Olsen, Jakob Bunkenborg, et al.Blagoy Blagoev, Yong Zhang, Jens S. Andersen, Matthias Mann posted to sequence-database proteomics by nedwards on 2009-10-25 22:16:59 as
	SeMoP: A New Computational Strategy for the Unrestricted Search for Modified Peptides Using LC−MS/MS Data [My Copy] Journal of Proteome Research, Vol. 7, No. 9. (5 September 2008), pp. 4199-4208. by Christian Baumgartner, Tomas Rejtar, Majlinda Kullolli, Lakshmi M. Akella, Barry L. Karger posted to no-tag by nedwards on 2009-10-25 19:19:00 as along with 1 person guhjy
	Prediction of high-responding peptides for targeted protein assays by mass spectrometry [My Copy] Nat Biotech, Vol. 27, No. 2. (25 February 2009), pp. 190-198. by Vincent A. Fusaro, D. R. Mani, Jill P. Mesirov, Steven A. Carr posted to no-tag by nedwards on 2009-10-25 16:36:02 as along with 4 people guhjy prost8 absterga brianb
	PEPPeR, a Platform for Experimental Proteomic Pattern Recognition [My Copy] Mol Cell Proteomics, Vol. 5, No. 10. (1 October 2006), pp. 1927-1941. by Jacob D. Jaffe, D. R. Mani, Kyriacos C. Leptos, George M. Church, Michael A. Gillette, Steven A. Carr posted to protomics protein-quantitation mass-spectrometry label-free by nedwards on 2009-10-25 15:14:00 as along with 1 person olberd
	Simulation and Prediction of the Adaptive Immune Response to Influenza A Virus Infection [My Copy] J. Virol., Vol. 83, No. 14. (15 July 2009), pp. 7151-7165. by Ha Y. Lee, David J. Topham, Sung Y. Park, et al.Joseph Hollenbaugh, John Treanor, Tim R. Mosmann, Xia Jin, Brian M. Ward, Hongyu Miao, Jeanne Holden-Wiltse, Alan S. Perelson, Martin Zand, Hulin Wu posted to no-tag by nedwards on 2009-10-01 15:50:29 as along with 1 person friendpine
	Interpreting Top-Down Mass Spectra Using Spectral Alignment [My Copy] Analytical Chemistry, Vol. 80, No. 7. (1 April 2008), pp. 2499-2505. by Ari M. Frank, James J. Pesavento, Craig A. Mizzen, Neil L. Kelleher, Pavel A. Pevzner posted to top-down tandem-mass-spectrometry proteomics by nedwards on 2009-09-30 21:32:59 as along with 3 people alexgeorgiou guhjy brianb
	Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol. [My Copy] Genome research, Vol. 19, No. 1. (January 2009), pp. 128-135. by Sébastien Gallien, Emmanuel Perrodou, Christine Carapito, et al.Caroline Deshayes, Jean-Marc M. Reyrat, Alain Van Dorsselaer, Olivier Poch, Christine Schaeffer, Odile Lecompte posted to no-tag by nedwards on 2009-09-16 01:49:13 as along with 1 person guhjy
	The Complete Genome and Proteome of Mycoplasma mobile [My Copy] Genome Research, Vol. 14, No. 8. (August 2004), pp. 1447-1461. by Jacob D. Jaffe, Nicole Stange-Thomann, Cherylyn Smith, et al.David DeCaprio, Sheila Fisher, Jonathan Butler, Sarah Calvo, Tim Elkins, Michael G. FitzGerald, Nabil Hafez, Chinnappa D. Kodira, John Major, Shunguang Wang, Jane Wilkinson, Robert Nicol, Chad Nusbaum, Bruce Birren, Howard C. Berg, George M. Church posted to no-tag by nedwards on 2009-09-16 01:43:01 as along with 1 person operon
	Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 886-896. by Geoffrey D. Findlay, Michael J. MacCoss, Willie J. Swanson posted to no-tag by nedwards on 2009-09-16 01:39:58 as
	Proteogenomics: needs and roles to be filled by proteomics in genome annotation [My Copy] Brief Funct Genomic Proteomic, Vol. 7, No. 1. (1 January 2008), pp. 50-62. by Charles Ansong, Samuel O. Purvine, Joshua N. Adkins, Mary S. Lipton, Richard D. Smith posted to no-tag by nedwards on 2009-09-16 01:38:04 as
	Alliance of Proteomics and Genomics to Unravel the Specificities of Sahara Bacterium Deinococcus deserti [My Copy] PLoS Genet, Vol. 5, No. 3. (27 March 2009), e1000434. by Arjan de Groot, Rémi Dulermo, Philippe Ortet, et al.Laurence Blanchard, Philippe Guérin, Bernard Fernandez, Benoit Vacherie, Carole Dossat, Edmond Jolivet, Patricia Siguier, Michael Chandler, Mohamed Barakat, Alain Dedieu, Valérie Barbe, Thierry Heulin, Suzanne Sommer, Wafa Achouak, Jean Armengaud posted to no-tag by nedwards on 2009-09-16 01:37:05 as
	A perfect genome annotation is within reach with the proteomics and genomics alliance [My Copy] Current Opinion in Microbiology, Vol. 12, No. 3. (4 June 2009), pp. 292-300. by Jean Armengaud posted to no-tag by nedwards on 2009-09-16 01:34:17 as along with 2 people brianb guhjy
	T3-Sequencing: Targeted Characterization of the N- and C-Termini of Undigested Proteins by Mass Spectrometry [My Copy] Analytical Chemistry, Vol. 75, No. 21. (1 November 2003), pp. 5817-5824. by Detlev Suckau, Anja Resemann posted to no-tag by nedwards on 2009-09-15 18:30:13 as
	Protein sequencing by mass analysis of polypeptide ladders after controlled protein hydrolysis [My Copy] Nature Biotechnology, Vol. 22, No. 10. (07 September 2004), pp. 1291-1296. by Hongying Zhong, Ying Zhang, Zhihui Wen, Liang Li posted to tandem-mass-spectrometry proteomics n-terminal-peptides by nedwards on 2009-09-15 18:02:06 as
	Proteomic Analysis of an Extreme Halophilic Archaeon, Halobacterium sp. NRC-1 [My Copy] Mol Cell Proteomics, Vol. 2, No. 8. (1 August 2003), pp. 506-524. by Young A. Goo, Eugene C. Yi, Nitin S. Baliga, et al.Weiguo A. Tao, Min Pan, Ruedi Aebersold, David R. Goodlett, Leroy Hood, Wailap V. Ng posted to no-tag by nedwards on 2009-09-15 15:39:22 as
	Characterization of the Human Small-Ribosomal-Subunit Proteins by N-Terminal and Internal Sequencing, and Mass Spectrometry [My Copy] European Journal of Biochemistry, Vol. 239, No. 1. (1996), pp. 144-149. by Sergey N. Vladimirov, Anton V. Ivanov, Galina G. Karpova, et al.Alekxander K. Musolyamov, Tsezi A. Egorov, Bernd Thiede, Brigitte Wittmann-Liebold, Albrecht Otto posted to no-tag by nedwards on 2009-09-11 17:01:40 as
	Characterization and Analysis of Posttranslational Modifications of the Human Large Cytoplasmic Ribosomal Subunit Proteins by Mass Spectrometry and Edman Sequencing [My Copy] Journal of Protein Chemistry, Vol. 22, No. 3. (1 April 2003), pp. 249-258. by Tatyana I. Odintsova, Eva-Christina Müller, Anton V. Ivanov, et al.Tsezi A. Egorov, Ralf Bienert, Serguei N. Vladimirov, Susanne Kostka, Albrecht Otto, Brigitte Wittmann-Liebold, Galina G. Karpova posted to no-tag by nedwards on 2009-09-11 17:00:53 as
	Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 9. (30 April 2002), pp. 5942-5947. by Sang-Won Lee, Scott J. Berger, Suzana MartinoviÄ, et al.Ljiljana PaÅ¡a-ToliÄ, Gordon A. Anderson, Yufeng Shen, Rui Zhao, Richard D. Smith posted to no-tag by nedwards on 2009-09-11 16:51:28 as along with 1 person gorlitsky
	Informatics solutions for high-throughput proteomics [My Copy] Drug Discovery Today, Vol. 11, No. 11-12. (June 2006), pp. 509-516. by T. Topaloglou posted to no-tag by nedwards on 2009-09-11 14:57:29 as
	Proteome informatics II: Bioinformatics for comparative proteomics [My Copy] PROTEOMICS, Vol. 6, No. 20. (October 2006), pp. 5445-5466. by Frédérique Lisacek, Sarah Cohen-Boulakia, Ron D. Appel posted to no-tag by nedwards on 2009-09-11 14:55:34 as along with 4 people Sonix guhjy agileproteomics pgan
	Proteome informatics I: Bioinformatics tools for processing experimental data [My Copy] PROTEOMICS, Vol. 6, No. 20. (2006), pp. 5435-5444. by Patricia M. Palagi, Patricia Hernandez, Daniel Walther, Ron D. Appel posted to no-tag by nedwards on 2009-09-11 14:55:13 as along with 5 people and 1 group Sonix guhjy agileproteomics pgan fgibson GelML
	Computational prediction of proteotypic peptides. [My Copy] Expert review of proteomics, Vol. 4, No. 3. (June 2007), pp. 351-354. by Josip Blonder, Timothy D. Veenstra posted to no-tag by nedwards on 2009-09-10 22:09:33 as
	Proteomic Studies of the Intrinsically Unstructured Mammalian Proteome [My Copy] Journal of Proteome Research, Vol. 5, No. 10. (1 October 2006), pp. 2839-2848. by Charles A. Galea, Vishwajeeth R. Pagala, John C. Obenauer, Cheon-Gil Park, Clive A. Slaughter, Richard W. Kriwacki posted to no-tag by nedwards on 2009-09-10 22:05:36 as
	Alignment of LC-MS images, with applications to biomarker discovery and protein identification. [My Copy] Proteomics, Vol. 8, No. 4. (February 2008), pp. 650-672. by Mathias Vandenbogaert, Sébastien Li-Thiao-Té, Hans-Michael M. Kaltenbach, Runxuan Zhang, Tero Aittokallio, Benno Schwikowski posted to proteomics protein-quantitation mass-spectrometry label-free by nedwards on 2009-09-10 21:27:36 as along with 2 people guhjy olberd
	Statistical and computational methods for comparative proteomic profiling using liquid chromatography-tandem mass spectrometry. [My Copy] Molecular & cellular proteomics : MCP, Vol. 4, No. 4. (1 April 2005), pp. 419-434. by Jennifer Listgarten, Andrew Emili posted to review proteomics protein-quantitation mass-spectrometry label-free by nedwards on 2009-09-10 21:26:32 as along with 4 people ptrobajo ml_and_apps waszak olberd
	Comparative LC-MS: A landscape of peaks and valleys [My Copy] PROTEOMICS, Vol. 8, No. 4. (February 2008), pp. 731-749. by Antoine H. P. America, Jan H. G. Cordewener posted to review proteomics protein-quantitation mass-spectrometry label-free by nedwards on 2009-09-10 21:09:15 as along with 4 people brianb talponer guhjy olberd
	Quantitative mass spectrometry in proteomics: a critical review [My Copy] Analytical and Bioanalytical Chemistry, Vol. 389, No. 4. (1 October 2007), pp. 1017-1031. by Marcus Bantscheff, Markus Schirle, Gavain Sweetman, Jens Rick, Bernhard Kuster posted to review proteomics protein-quantitation mass-spectrometry label-free isotope-label by nedwards on 2009-09-10 21:05:29 as along with 3 people robert Yanno guhjy
	Label-free mass spectrometry-based protein quantification technologies in proteomic analysis [My Copy] Brief Funct Genomic Proteomic, Vol. 7, No. 5. (1 September 2008), pp. 329-339. by Mu Wang, Jinsam You, Kerry G. Bemis, Tony J. Tegeler, Dawn P. G. Brown posted to review proteomics protein-quantitation mass-spectrometry label-free by nedwards on 2009-09-10 21:00:54 as along with 2 people nuin guhjy
	Archaeal N-terminal Protein Maturation Commonly Involves N-terminal Acetylation: A Large-scale Proteomics Survey [My Copy] Journal of Molecular Biology, Vol. 362, No. 5. (06 October 2006), pp. 915-924. by Michaela Falb, Michalis Aivaliotis, Carolina Garcia-Rizo, et al.Birgit Bisle, Andreas Tebbe, Christian Klein, Kosta Konstantinidis, Frank Siedler, Friedhelm Pfeiffer, Dieter Oesterhelt posted to no-tag by nedwards on 2009-09-08 22:05:56 as
	Tools for analyzing and predicting N-terminal protein modifications [My Copy] PROTEOMICS, Vol. 8, No. 4. (February 2008), pp. 626-649. by Thierry Meinnel, Carmela Giglione posted to no-tag by nedwards on 2009-09-08 21:21:37 as along with 1 person guhjy
	Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger [My Copy] BMC Genomics, Vol. 10, No. 1. (04 February 2009), 61. by James Wright, Deana Sugden, Sue F. McIntyre, et al.Isabel R. Garcia, Simon Gaskell, Igor Grigoriev, Scott Baker, Robert Beynon, Simon Hubbard posted to tandem-mass-spectra proteomics genome-annotation by nedwards on 2009-09-08 19:22:00 as along with 3 people and 1 group bcondon nlapalu stajich Mycology
	Organellar peptide deformylases: universality of the N-terminal methionine cleavage mechanism [My Copy] Trends in Plant Science, Vol. 6, No. 12. (1 December 2001), pp. 566-572. by C. Giglione posted to no-tag by nedwards on 2009-09-08 19:08:01 as
	The N-end rule: functions, mysteries, uses [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 93, No. 22. (29 October 1996), pp. 12142-12149. by A. Varshavsky posted to no-tag by nedwards on 2009-09-08 19:07:29 as along with 1 person MarcJungbluth
	Straightforward ladder sequencing of peptides using a Lys-N metalloendopeptidase [My Copy] Nat Meth, Vol. 5, No. 5. (20 May 2008), pp. 405-407. by Nadia Taouatas, Madalina M. Drugan, Albert J. R. Heck, Shabaz Mohammed posted to no-tag by nedwards on 2009-08-24 22:04:16 as along with 1 person alexgeorgiou
	Automated Proteomics of E. coli via Top-Down Electron-Transfer Dissociation Mass Spectrometry [My Copy] Analytical Chemistry, Vol. 80, No. 5. (1 March 2008), pp. 1459-1467. by Maureen K. Bunger, Benjamin J. Cargile, Anne Ngunjiri, Jonathan L. Bundy, James L. Stephenson posted to no-tag by nedwards on 2009-08-24 21:05:09 as
	De novo glycan structure search with CID MS/MS spectra of native N-glycopeptides. [My Copy] Glycobiology (6 March 2009) by Hannu Peltoniemi, Sakari Joenväärä, Risto Renkonen posted to glycoproteins glycomics by nedwards on 2009-08-20 21:59:30 as along with 2 people fishtank Terkko
	N-Glycoproteomics - An automated workflow approach [My Copy] Glycobiology, Vol. 18, No. 4. (1 April 2008), pp. 339-349. by Sakari Joenvaara, Ilja Ritamo, Hannu Peltoniemi, Risto Renkonen posted to glyomics glycoproteins by nedwards on 2009-08-20 21:38:20 as along with 2 people Terkko guhjy
	Off-Line Two-Dimensional Liquid Chromatography with Maximized Sample Loading to Reversed-Phase Liquid Chromatography-Electrospray Ionization Tandem Mass Spectrometry for Shotgun Proteome Analysis [My Copy] Analytical Chemistry, Vol. 81, No. 3. (1 February 2009), pp. 1049-1060. by Nan Wang, Chuanhui Xie, J. Bryce Young, Liang Li posted to protoemics fractionation by nedwards on 2009-08-20 21:35:37 as along with 1 person brianb
	GlycoCT—a unifying sequence format for carbohydrates [My Copy] Carbohydrate Research, Vol. 343, No. 12. (11 August 2008), pp. 2162-2171. by S. Herget, R. Ranzinger, K. Maass, Lieth posted to glycomics by nedwards on 2009-08-18 17:56:48 as

Note: You may cite this page as: http://www.citeulike.org/user/nedwards

Result page: 1 2 3 4 5 6 7 8 9 10 Next

proteomics	327
tandem-mass-spectrometry	183
peptide-identification	143
mass-spectrometry	98
microorganism-identification	52
protein-quantitation	51
systems-biology	51
sequence-alignment	46
string-matching	40
peptide-identification-statistics	38
gapped-seeds	33
denovo-interpretation	30
n-terminal-peptides	28
genome-annotation	24
label-free	24
top-down	19
heterogeneous-data-sources	16
peak-detection	16
phosphorylation	16
isotope-cluster-modeling	15
protein-protein-interactions	14
proteomics-software	14
bacillus	13
string-indexing	13
bchb-583-review	11
data-integration	11
nopdf	11
oligonucleotide-design	11
spectral-matching	10
high-accuracy	9
cancer-biomarkers	8
seed-strategies	8
serum-profiling	8
alternative-splicing	7
bchb-583	7
biomarkers	7
isotope-label	7
machine-learning	7
protein-identification	7
protein-quantitation-statistics	7
antibiotic-resistance	6
dna-based	6
gene-expression	6
genome-assembly	6
locality-sensitive-hashing	6
peptide-spectrum-score	6
post-translational-modifications	6
proteomics-data-standards	6
review	6
sequence-database	6
sequencing-by-hybridization-graph	6
acid-cleavage	5
c-terminal-peptides	5
ft-ms	5
membrane	5
proteolytic-trimming	5
proteomics-data	5
proteomics-data-repository	5
unique-oligonucleotides	5
breast-cancer	4
inexact-string-matching	4
msblast	4
peptide-atlas	4
proteomics-workflows	4
stable-isotope-labeling	4
algorithms	3
alignment-anchors	3
cadmium	3
cancer	3
glycomics	3
glycoproteins	3
haplotypes	3
malaria	3
mascot	3
motif-finding	3
prosight-score	3
protein-homology	3
ribosomal-proteins	3
short-read-sequencing	3
tandem	3
translation-initiation	3
approximate-graph-matching	2
burrows-wheeler	2
estrogen	2
external-algorithms	2
gene-finders	2
graph-algorithms	2
hidden-markov-models	2
hupo-ppp	2
mudpit	2
omssa	2
organelle	2
peptide-identification-combiners	2
phasing	2
proteoimcs	2
proteomics-projects	2
signal-peptide	2
species-signatures	2
spectral-counting	2
subtractive-proteomics	2
suffix-trees	2
tandem-mass-spectra	2
acetylation	1
alzheimers-disease	1
androgen	1
applied-statistics	1
approximation-algorithms	1
beta-lactamase	1
biomarker	1
cloud-computing	1
codon-adaption-index	1
combinatorics	1
correlation	1
data-resources	1
digest-specificity	1
drug-resistance	1
dynamic-exclusion	1
electron-transfer-dissociation	1
fractionation	1
gas-phase-fractionation	1
genetic-engineering	1
glyomics	1
gycomics	1
hd-exchange	1
histones	1
maldi	1
metabolomics	1
middle-down	1
multidrug-resistance	1
multiplexed-pcr	1
optimization	1
orbitrap	1
ovarian-cancer	1
partial-digest-problem	1
peptide-enumeration	1
phosphopeptide	1
phylogenetic-analysis	1
plasma	1
profile-correlation	1
prosight	1
prostate-cancer	1
protein-families	1
protein-informatics	1
protein-isoforms	1
protein-motif-statistics	1
proteogenomics	1
proteomcs	1
protoemics	1
protomics	1
randomized-algorithms	1
sensitivity	1
sequencing-technologies	1
sequest	1
shotgun	1
shutgun-proteomics	1
specificity	1
spectral-processing	1
staphylococcus-aureus	1
statistical-significance	1
subcelluar-fractionation	1
ubiquitination	1

nedwards's library 612 articles Export

nedwards's tags