nedwards's Yates:JR [20 articles] Export Sort

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	Systematic comparison of the human saliva and plasma proteomes [My Copy] PROTEOMICS - CLINICAL APPLICATIONS, Vol. 3, No. 1. (1 January 2009), pp. 116-134. by Weihong Yan, Rolf Apweiler, Brian M. Balgley, et al.Pinmanee Boontheung, Jonathan L. Bundy, Benjamin J. Cargile, Steve Cole, Xueping Fang, Mireya Gonzalez-Begne, Timothy J. Griffin, Fred Hagen, Shen Hu, Lawrence E. Wolinsky, Cheng S. Lee, Daniel Malamud, James E. Melvin, Rajasree Menon, Michael Mueller, Renli Qiao, Nelson L. Rhodus, Joel R. Sevinsky, David States, James L. Stephenson, Shawn Than, John R. Yates, Weixia Yu, Hongwei Xie, Yongming Xie, Gilbert S. Omenn, Joseph A. Loo, David T. Wong posted to no-tag by nedwards on 2009-11-13 20:52:56 as along with 1 person brianb
	Shotgun proteomics: integrating technologies to answer biological questions. [My Copy] Current opinion in molecular therapeutics, Vol. 5, No. 3. (June 2003), pp. 302-309. by W. Hayes McDonald, John R. Yates posted to no-tag by nedwards on 2009-11-03 19:15:47 as
	Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book [My Copy] Nature Methods, Vol. 1, No. 3. (18 November 2004), pp. 195-202. by Rovshan G. Sadygov, Daniel Cociorva, John R. Yates posted to no-tag by nedwards on 2009-11-03 18:57:34 as along with 1 person kallberg
	Large-scale analysis of the yeast proteome by multidimensional protein identification technology [My Copy] Nature Biotechnology, Vol. 19, No. 3. (01 March 2001), pp. 242-247. by Michael P. Washburn, Dirk Wolters, John R. Yates posted to no-tag by nedwards on 2009-11-03 18:41:34 as along with 1 person and 1 group bala DictyosteliumGroup
	Mass spectrometry for proteomics. [My Copy] Current opinion in chemical biology, Vol. 12, No. 5. (18 October 2008), pp. 483-490. by Xuemei Han, Aaron Aslanian, John R. Yates posted to proteomics by nedwards on 2009-05-01 18:30:52 as along with 4 people yujiangwang fishtank guhjy sjcockell
	Proteomics of organelles and large cellular structures [My Copy] Nature Reviews Molecular Cell Biology, Vol. 6, No. 9. (01 September 2005), pp. 702-714. by John R. Yates, Annalyn Gilchrist, Kathryn E. Howell, John J. M. Bergeron posted to organelle proteomics by nedwards on 2009-04-19 02:25:26 as
	Improving Protein Identification Sensitivity by Combining MS and MS/MS Information for Shotgun Proteomics Using LTQ-Orbitrap High Mass Accuracy Data [My Copy] Anal. Chem., Vol. 80, No. 6. (15 March 2008), pp. 2018-2025. by B. Lu, A. Motoyama, C. Ruse, J. Venable, J. R. Yates posted to high-accuracy peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2008-10-03 17:15:12 as along with 3 people fishtank guhjy brianb
	Mass spectrometry and the age of the proteome [My Copy] Journal of Mass Spectrometry, Vol. 33, No. 1. (1998), pp. 1-19. by John R. Yates posted to peptide-identification proteomics shotgun tandem-mass-spectrometry by nedwards on 2007-10-18 17:33:29 as
	Large Scale Protein Profiling by Combination of Protein Fractionation and Multidimensional Protein Identification Technology (MudPIT) [My Copy] Mol Cell Proteomics, Vol. 5, No. 1. (1 January 2006), pp. 53-56. by Emily I. Chen, Johannes Hewel, Brunhilde Felding-Habermann, John R. Yates posted to mudpit peptide-identification proteomics by nedwards on 2007-10-18 17:21:50 as
	A Hypergeometric Probability Model for Protein Identification and Validation Using Tandem Mass Spectral Data and Protein Sequence Databases [My Copy] Anal. Chem., Vol. 75, No. 15. (1 August 2003), pp. 3792-3798. by R. G. Sadygov, J. R. Yates posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2007-10-11 18:57:40 as
	Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development [My Copy] Genome Res., Vol. 17, No. 9. (1 September 2007), pp. 1378-1388. by Daniel B. Mcclatchy, Lujian Liao, Sung K. Park, John D. Venable, John R. Yates posted to isotope-label mass-spectrometry protein-quantitation proteomics by nedwards on 2007-10-01 21:11:02 as
	The minimum information about a proteomics experiment (MIAPE) [My Copy] Nature Biotechnology, Vol. 25, No. 8. (08 August 2007), pp. 887-893. by Chris F. Taylor, Norman W. Paton, Kathryn S. Lilley, et al.Pierre-Alain Binz, Randall K. Julian, Andrew R. Jones, Weimin Zhu, Rolf Apweiler, Ruedi Aebersold, Eric W. Deutsch, Michael J. Dunn, Albert J. R. Heck, Alexander Leitner, Marcus Macht, Matthias Mann, Lennart Martens, Thomas A. Neubert, Scott D. Patterson, Peipei Ping, Sean L. Seymour, Puneet Souda, Akira Tsugita, Joel Vandekerckhove, Thomas M. Vondriska, Julian P. Whitelegge, Marc R. Wilkins, Ioannnis Xenarios, John R. Yates, Henning Hermjakob posted to proteomics proteomics-data-standards proteomics-data-repository by nedwards on 2007-08-30 20:37:30 as along with 7 people and 1 group mtaschuk robert guhjy eweaver hpiwowar alanrw fgibson GelML
	Statistical models for protein validation using tandem mass spectral data and protein amino acid sequence databases. [My Copy] Anal Chem, Vol. 76, No. 6. (15 March 2004), pp. 1664-1671. by R. G. Sadygov, H. Liu, J. R. Yates posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2007-08-30 16:28:30 as along with 3 people kallberg fishtank nuin
	Probability-based validation of protein identifications using a modified SEQUEST algorithm. [My Copy] Anal Chem, Vol. 74, No. 21. (1 November 2002), pp. 5593-5599. by M. J. MacCoss, C. C. Wu, J. R. Yates posted to peptide-identification peptide-identification-statistics peptide-spectrum-score proteomics tandem-mass-spectrometry by nedwards on 2007-08-30 16:27:30 as along with 1 person kallberg
	Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database. [My Copy] Anal Chem, Vol. 67, No. 8. (15 April 1995), pp. 1426-1436. by J. R. Yates, J. K. Eng, A. L. McCormack, D. Schieltz posted to peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-30 16:27:03 as
	Nuclear Membrane Proteins with Potential Disease Links Found by Subtractive Proteomics [My Copy] Science, Vol. 301, No. 5638. (5 September 2003), pp. 1380-1382. by Eric C. Schirmer, Laurence Florens, Tinglu Guan, John R. Yates, Larry Gerace posted to proteomics proteomics-workflows subtractive-proteomics by nedwards on 2007-08-29 15:58:03 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	A model for random sampling and estimation of relative protein abundance in shotgun proteomics. [My Copy] Anal Chem, Vol. 76, No. 14. (15 July 2004), pp. 4193-4201. by H. Liu, R. G. Sadygov, J. R. Yates posted to peptide-identification peptide-identification-statistics protein-quantitation proteomics tandem-mass-spectrometry by nedwards on 2007-08-20 17:35:14 as along with 2 people chemnerd1 kentsis
	Method To Compare Collision-Induced Dissociation Spectra of Peptides: Potential for Library Searching and Subtractive Analysis [My Copy] Anal. Chem., Vol. 70, No. 17. (1 September 1998), pp. 3557-3565. by J. R. Yates, S. F. Morgan, C. L. Gatlin, P. R. Griffin, J. K. Eng posted to peptide-identification proteomics spectral-matching tandem-mass-spectrometry by nedwards on 2007-08-08 20:20:03 as
	GutenTag: high-throughput sequence tagging via an empirically derived fragmentation model. [My Copy] Anal Chem, Vol. 75, No. 23. (1 December 2003), pp. 6415-6421. by D. L. Tabb, A. Saraf, J. R. Yates posted to peptide-identification proteomics proteomics-software tandem-mass-spectrometry by nedwards on 2007-08-08 20:17:30 as along with 1 person hoangmit
	A hypergeometric probability model for protein identification and validation using tandem mass spectral data and protein sequence databases. [My Copy] Anal Chem, Vol. 75, No. 15. (1 August 2003), pp. 3792-3798. by R. G. Sadygov, J. R. Yates posted to peptide-identification-statistics protein-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:00:03 as

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proteomics	327
tandem-mass-spectrometry	183
peptide-identification	143
mass-spectrometry	98
microorganism-identification	52
protein-quantitation	51
systems-biology	51
sequence-alignment	46
string-matching	40
peptide-identification-statistics	38
gapped-seeds	33
denovo-interpretation	30
n-terminal-peptides	28
genome-annotation	24
label-free	24
top-down	19
phosphorylation	16
heterogeneous-data-sources	16
peak-detection	16
isotope-cluster-modeling	15
proteomics-software	14
protein-protein-interactions	14
string-indexing	13
bacillus	13
data-integration	11
bchb-583-review	11
oligonucleotide-design	11
nopdf	11
spectral-matching	10
high-accuracy	9
serum-profiling	8
cancer-biomarkers	8
seed-strategies	8
alternative-splicing	7
isotope-label	7
bchb-583	7
biomarkers	7
protein-quantitation-statistics	7
protein-identification	7
machine-learning	7
proteomics-data-standards	6
antibiotic-resistance	6
sequencing-by-hybridization-graph	6
gene-expression	6
review	6
genome-assembly	6
sequence-database	6
dna-based	6
locality-sensitive-hashing	6
peptide-spectrum-score	6
post-translational-modifications	6
ft-ms	5
c-terminal-peptides	5
acid-cleavage	5
membrane	5
proteomics-data-repository	5
proteomics-data	5
proteolytic-trimming	5
unique-oligonucleotides	5
peptide-atlas	4
proteomics-workflows	4
inexact-string-matching	4
msblast	4
stable-isotope-labeling	4
breast-cancer	4
protein-homology	3
short-read-sequencing	3
mascot	3
motif-finding	3
tandem	3
malaria	3
translation-initiation	3
haplotypes	3
alignment-anchors	3
algorithms	3
cancer	3
glycomics	3
prosight-score	3
glycoproteins	3
ribosomal-proteins	3
cadmium	3
hupo-ppp	2
species-signatures	2
tandem-mass-spectra	2
organelle	2
peptide-identification-combiners	2
external-algorithms	2
estrogen	2
graph-algorithms	2
gene-finders	2
hidden-markov-models	2
suffix-trees	2
spectral-counting	2
approximate-graph-matching	2
subtractive-proteomics	2
mudpit	2
proteoimcs	2
burrows-wheeler	2
signal-peptide	2
phasing	2
omssa	2
proteomics-projects	2
subcelluar-fractionation	1
plasma	1
gycomics	1
ovarian-cancer	1
approximation-algorithms	1
genetic-engineering	1
protoemics	1
staphylococcus-aureus	1
sequest	1
acetylation	1
androgen	1
multiplexed-pcr	1
histones	1
protein-isoforms	1
sequencing-technologies	1
drug-resistance	1
multidrug-resistance	1
proteomcs	1
prostate-cancer	1
phosphopeptide	1
orbitrap	1
ubiquitination	1
applied-statistics	1
biomarker	1
glyomics	1
partial-digest-problem	1
spectral-processing	1
randomized-algorithms	1
dynamic-exclusion	1
profile-correlation	1
proteogenomics	1
statistical-significance	1
electron-transfer-dissociation	1
sensitivity	1
correlation	1
fractionation	1
protomics	1
codon-adaption-index	1
shotgun	1
peptide-enumeration	1
specificity	1
alzheimers-disease	1
protein-motif-statistics	1
digest-specificity	1
protein-families	1
phylogenetic-analysis	1
metabolomics	1
combinatorics	1
protein-informatics	1
gas-phase-fractionation	1
hd-exchange	1
prosight	1
beta-lactamase	1
maldi	1
middle-down	1
data-resources	1
optimization	1
shutgun-proteomics	1
cloud-computing	1

nedwards's Yates:JR [20 articles] Export Sort

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