nedwards's top-down [19 articles] Export

Recent papers added to nedwards's library classified by the tag top-down. You can also see everyone's top-down.

	Top-Down Identification of Protein Biomarkers in Bacteria with Unsequenced Genomes. [My Copy] Analytical chemistry, Vol. 81, No. 23. (2 November 2009), pp. 9633-9642. by Colin Wynne, Catherine Fenselau, Plamen A. Demirev, Nathan Edwards posted to top-down proteomics protein-identification prosight phylogenetic-analysis microorganism-identification by nedwards on 2009-11-05 22:20:30 as along with 2 people gjuggler brianb
	Interpreting Top-Down Mass Spectra Using Spectral Alignment [My Copy] Analytical Chemistry, Vol. 80, No. 7. (1 April 2008), pp. 2499-2505. by Ari M. Frank, James J. Pesavento, Craig A. Mizzen, Neil L. Kelleher, Pavel A. Pevzner posted to top-down tandem-mass-spectrometry proteomics by nedwards on 2009-09-30 21:32:59 as along with 3 people alexgeorgiou guhjy brianb
	Identification of membrane proteins by tandem mass spectrometry of protein ions [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 36. (4 September 2007), pp. 14330-14335. by Joe Carroll, Matthew C. Altman, Ian M. Fearnley, John E. Walker posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2009-05-04 14:51:05 as along with 2 people and 2 groups dchughes zwang G4ID Genetics-of-Gambling
	Top-Down Protein Identification/Characterization of a Priori Unknown Proteins via Ion Trap Collision-Induced Dissociation and Ion/Ion Reactions in a Quadrupole/Time-of-Flight Tandem Mass Spectrometer [My Copy] Analytical Chemistry, Vol. 81, No. 4. (15 February 2009), pp. 1433-1441. by Jian Liu, Teng-Yi Huang, Scott A. Mcluckey posted to protein-identification proteomics top-down by nedwards on 2009-03-11 14:35:55 as along with 1 person brianb
	Mass Spectrometry Analysis of Proteome-Wide Proteolytic Post-Translational Degradation of Proteins [My Copy] Anal. Chem. (26 June 2008) by Yufeng Shen, Kim K. Hixson, Nikola Tolić, et al.David G. Camp, Samuel O. Purvine, Ronald J. Moore, Richard D. Smith posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-11-14 16:23:49 as along with 2 people guhjy brianb
	DECOMP--from interpreting Mass Spectrometry peaks to solving the Money Changing Problem [My Copy] Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 591-593. by Sebastian Bocker, Zsuzsanna Liptak, Marcel Martin, Anton Pervukhin, Henner Sudek posted to denovo-interpretation high-accuracy mass-spectrometry top-down by nedwards on 2008-11-06 19:42:44 as along with 4 people mmartin guhjy laughcry robert
	New and Automated MSn Approaches for Top-Down Identification of Modified Proteins [My Copy] Journal of the American Society for Mass Spectrometry, Vol. 16, No. 12. (December 2005), pp. 2027-2038. by V. Zabrouskov, M. Senko, Y. Du, R. Leduc, N. Kelleher posted to high-accuracy proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-21 20:41:51 as
	Using ProSight PTM and Related Tools for Targeted Protein Identification and Characterization with High Mass Accuracy Tandem MS Data [My Copy] Current Protocols in Bioinformatics, Vol. 19, No. 13. (September 2007), pp. 1-28. by Richard D. Leduc, Neil L. Kelleher posted to high-accuracy nopdf proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-16 21:16:43 as along with 1 person Sonix
	Tissue-Specific Expression and Post-Translational Modification of Histone H3 Variants [My Copy] J. Proteome Res., Vol. 7, No. 10. (3 October 2008), pp. 4225-4236. by Benjamin A. Garcia, Eric C. Thomas, Neil L. Kelleher, Craig A. Mizzen posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 21:42:06 as along with 1 person brianb
	Web and Database Software for Identification of Intact Proteins Using "Top Down" Mass Spectrometry [My Copy] Anal. Chem., Vol. 75, No. 16. (15 August 2003), pp. 4081-4086. by G. K. Taylor, Y. B. Kim, A. J. Forbes, F. Meng, R. Mccarthy, N. L. Kelleher posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:33:04 as
	Top down mass spectrometry of < 60-kDa proteins from Methanosarcina acetivorans using quadrupole FRMS with automated octopole collisionally activated dissociation. [My Copy] Molecular & cellular proteomics : MCP, Vol. 5, No. 1. (January 2006), pp. 14-25. by S. M. Patrie, J. T. Ferguson, D. E. Robinson, et al.D. Whipple, M. Rother, W. W. Metcalf, N. L. Kelleher posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:30:37 as
	ProSight PTM: an integrated environment for protein identification and characterization by top-down mass spectrometry [My Copy] Nucl. Acids Res., Vol. 32, No. suppl_2. (1 July 2004), pp. W340-345. by Richard D. Leduc, Gregory K. Taylor, Yong-Bin Kim, et al.Thomas E. Januszyk, Lee H. Bynum, Joseph V. Sola, John S. Garavelli, Neil L. Kelleher posted to prosight-score proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:30:17 as
	ProSight PTM 2.0: improved protein identification and characterization for top down mass spectrometry. [My Copy] Nucleic acids research, Vol. 35, No. Web Server issue. (July 2007) by L. Zamdborg, R. D. LeDuc, K. J. Glowacz, et al.Y. B. Kim, V. Viswanathan, I. T. Spaulding, B. P. Early, E. J. Bluhm, S. Babai, N. L. Kelleher posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:30:07 as along with 1 person guhjy
	Using ProSight PTM and related tools for targeted protein identification and characterization with high mass accuracy tandem MS data. [My Copy] Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol. Chapter 13 (September 2007) by R. D. Leduc, N. L. Kelleher posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:29:55 as
	Decoding protein modifications using top-down mass spectrometry [My Copy] Nat Meth, Vol. 4, No. 10. (October 2007), pp. 817-821. by Nertila Siuti, Neil L. Kelleher posted to proteomics tandem-mass-spectrometry top-down by nedwards on 2008-10-07 18:23:26 as along with 3 people robert debasis guhjy
	Fourier-transform mass spectrometry for automated fragmentation and identification of 5-20 kDa proteins in mixtures [My Copy] ELECTROPHORESIS, Vol. 23, No. 18. (2002), pp. 3217-3223. by Jeffrey R. Johnson, Fanyu Meng, Andrew J. Forbes, Benjamin J. Cargile, Neil L. Kelleher posted to ft-ms mass-spectrometry proteomics top-down by nedwards on 2007-12-12 20:11:59 as
	Top-Down Approaches for Measuring Expression Ratios of Intact Yeast Proteins Using Fourier Transform Mass Spectrometry [My Copy] Anal. Chem., Vol. 78, No. 3. (1 February 2006), pp. 686-694. by Y. Du, B. A. Parks, S. Sohn, K. E. Kwast, N. L. Kelleher posted to ft-ms mass-spectrometry protein-quantitation proteomics top-down by nedwards on 2007-12-12 20:08:27 as
	Quantitative Analysis of Modified Proteins and Their Positional Isomers by Tandem Mass Spectrometry: Human Histone H4 [My Copy] Anal. Chem., Vol. 78, No. 13. (1 July 2006), pp. 4271-4280. by J. J. Pesavento, C. A. Mizzen, N. L. Kelleher posted to ft-ms mass-spectrometry proteomics top-down by nedwards on 2007-12-12 20:03:50 as
	Top-Down Proteomics on a Chromatographic Time Scale Using Linear Ion Trap Fourier Transform Hybrid Mass Spectrometers [My Copy] Analytical Chemistry, Vol. 79, No. 21. (1 November 2007), pp. 7984-7991. by Bryan A. Parks, Lihua Jiang, Paul M. Thomas, et al.Craig D. Wenger, Michael J. Roth, Michael T. Boyne, Patricia V. Burke, Kurt E. Kwast, Neil L. Kelleher posted to ft-ms mass-spectrometry proteomics top-down by nedwards on 2007-12-12 19:57:05 as

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proteomics	327
tandem-mass-spectrometry	183
peptide-identification	143
mass-spectrometry	98
microorganism-identification	52
protein-quantitation	51
systems-biology	51
sequence-alignment	46
string-matching	40
peptide-identification-statistics	38
gapped-seeds	33
denovo-interpretation	30
n-terminal-peptides	28
genome-annotation	24
label-free	24
top-down	19
phosphorylation	16
heterogeneous-data-sources	16
peak-detection	16
isotope-cluster-modeling	15
proteomics-software	14
protein-protein-interactions	14
string-indexing	13
bacillus	13
data-integration	11
bchb-583-review	11
oligonucleotide-design	11
nopdf	11
spectral-matching	10
high-accuracy	9
serum-profiling	8
cancer-biomarkers	8
seed-strategies	8
alternative-splicing	7
isotope-label	7
bchb-583	7
biomarkers	7
protein-quantitation-statistics	7
protein-identification	7
machine-learning	7
proteomics-data-standards	6
antibiotic-resistance	6
sequencing-by-hybridization-graph	6
gene-expression	6
review	6
genome-assembly	6
sequence-database	6
dna-based	6
locality-sensitive-hashing	6
peptide-spectrum-score	6
post-translational-modifications	6
ft-ms	5
c-terminal-peptides	5
acid-cleavage	5
membrane	5
proteomics-data-repository	5
proteomics-data	5
proteolytic-trimming	5
unique-oligonucleotides	5
peptide-atlas	4
proteomics-workflows	4
inexact-string-matching	4
msblast	4
stable-isotope-labeling	4
breast-cancer	4
protein-homology	3
short-read-sequencing	3
mascot	3
motif-finding	3
tandem	3
malaria	3
translation-initiation	3
haplotypes	3
alignment-anchors	3
algorithms	3
cancer	3
glycomics	3
prosight-score	3
glycoproteins	3
ribosomal-proteins	3
cadmium	3
hupo-ppp	2
species-signatures	2
tandem-mass-spectra	2
organelle	2
peptide-identification-combiners	2
external-algorithms	2
estrogen	2
graph-algorithms	2
gene-finders	2
hidden-markov-models	2
suffix-trees	2
spectral-counting	2
approximate-graph-matching	2
subtractive-proteomics	2
mudpit	2
proteoimcs	2
burrows-wheeler	2
signal-peptide	2
phasing	2
omssa	2
proteomics-projects	2
subcelluar-fractionation	1
plasma	1
gycomics	1
ovarian-cancer	1
approximation-algorithms	1
genetic-engineering	1
protoemics	1
staphylococcus-aureus	1
sequest	1
acetylation	1
androgen	1
multiplexed-pcr	1
histones	1
protein-isoforms	1
sequencing-technologies	1
drug-resistance	1
multidrug-resistance	1
proteomcs	1
prostate-cancer	1
phosphopeptide	1
orbitrap	1
ubiquitination	1
applied-statistics	1
biomarker	1
glyomics	1
partial-digest-problem	1
spectral-processing	1
randomized-algorithms	1
dynamic-exclusion	1
profile-correlation	1
proteogenomics	1
statistical-significance	1
electron-transfer-dissociation	1
sensitivity	1
correlation	1
fractionation	1
protomics	1
codon-adaption-index	1
shotgun	1
peptide-enumeration	1
specificity	1
alzheimers-disease	1
protein-motif-statistics	1
digest-specificity	1
protein-families	1
phylogenetic-analysis	1
metabolomics	1
combinatorics	1
protein-informatics	1
gas-phase-fractionation	1
hd-exchange	1
prosight	1
beta-lactamase	1
maldi	1
middle-down	1
data-resources	1
optimization	1
shutgun-proteomics	1
cloud-computing	1

nedwards's top-down [19 articles] Export

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