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protein	153
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structure	135
kinase	131
prediction	117
phosphorylation	102
software	101
interaction	100
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substrate	36
webserver	36
peptide	35
expression	33
domain	33
genetics	32
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phylogeny	31
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article-pka-pkg	25
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structure-activity	6
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introduction	3
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sulfolobus	3
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heat-shock	3
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post-translational	3
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retrieval	3
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xanthomonas	3
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mouse	3
dna-binding	3
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water	3
dimerization	3
c1	3
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xml	3
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ubiquitin	3
of	3
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histone	3
pyrosequencing	3
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helix	3
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lims	3
beta-adrenergic	3
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chip	3
base	3
squid	2
t-rex	2
methylotrophy	2
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lead	2
computer-assisted	2
phosphopeptide	2
solubility	2
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protease	2
citations	2
artificial	2
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ajax	2
female	2
leucine	2
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md	2
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site-directed	2
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virtual	2
context	2
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orf	2
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osmotic	2
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predikin	2
sh3	2
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vertebrate	2
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breast-cancer	2
history	2
ruby	2
proteins	2
enterococcus	2
protein-ligand	2
operon	2
ligases	2
centrality	2
biotechnology	2
teaching	2
dog	2
carrier	2
confidence	2
haloferax	2
g-protein-coupled	2
type-iv	2
immunity	2
compounds	2
workflow	2
pagerank	2
fold	2