neils's bioinformatics [196 articles] Export

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	An introduction to scripting in Ruby for biologists. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 221. by Jan Aerts, Andy Law posted to bioinformatics introduction programming ruby by neils on 2009-07-17 00:15:23 as along with 25 people and 3 groups isimpson kshameer n00c Zephyrus nuin sobolevnrm jago lwaldron apaydin natstreet Stew silberbauer mfenner phoenixzxl renatomilani abhishek_tiwari rschulz sjcockell dullhunk druvus daforerog fgibson leemond31 brianb dswan Bioinformatics - CRUK Journal picks Bioinformatics
	Conserved amino acid markers from past influenza pandemic strains [My Copy] BMC Microbiology, Vol. 9 (22 April 2009), 77. by Jonathan, Tom R. Slezak posted to bioinformatics biomarker classification influenza virulence virus by neils on 2009-06-17 07:20:49 as along with 5 people kiekyon zwang idoerg anacampos friendpine
	A methanogen hosted the origin of the genetic code. [My Copy] Journal of theoretical biology (3 June 2009) by Massimo Di Giulio posted to analysis archaea bioinformatics evolution methanogen sequence by neils on 2009-06-10 00:00:12 as
	Structure is three to ten times more conserved than sequence - A study of structural response in protein cores [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 77, No. 3. (20 April 2009), pp. 499-508. by Kristoffer Illergård, David H. Ardell, Arne Elofsson posted to analysis bioinformatics conservation function sequence structure by neils on 2009-06-09 23:58:57 as along with 4 people and 1 group TRHvidsten AliC brianb reyez Orengo Group Journal Picks
	WebLab: a data-centric, knowledge-sharing bioinformatic platform [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W33-39. by Xiaoqiao Liu, Jianmin Wu, Jun Wang, et al.Xiaochuan Liu, Shuqi Zhao, Zhe Li, Lei Kong, Xiaocheng Gu, Jingchu Luo, Ge Gao posted to analysis bioinformatics literature software webserver workflow by neils on 2009-05-23 06:33:26 as along with 14 people applebyb fgibson abhishek_tiwari pekrau dullhunk leemond31 pininforthefjords nuin daforerog druvus operon guhjy psique renatomilani
	An active registry for bioinformatics web services. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2090-2091. by S. Pettifer, D. Thorne, P. McDermott, et al.T. Attwood, J. Baran, J. C. Bryne, T. Hupponen, D. Mowbray, G. Vriend posted to bioinformatics directory service web by neils on 2009-05-22 08:30:51 as along with 14 people and 2 groups pekrau joachimbaran pkonings dswan niallhaslam n00c druvus guhjy flipip23 chrisamiller nuin dbk kshameer dullhunk Bioinformatics Journal picks
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted to bioinformatics biopython library python software by neils on 2009-05-15 01:03:12 as along with 37 people and 9 groups Geknitics pekrau Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose oteri cmzmasek jwm guhjy AlexBateman daforerog ltitodem Thaverkamp sobolevnrm psique dswan dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus jago kshameer operon svozil Systems_Biology Computational_Systems_Biology Structural Biology Group TorVergata Journal picks baker-group Bioinformatics Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services
	Web services at the European Bioinformatics Institute-2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W6-10. by Hamish Mcwilliam, Franck Valentin, Mickael Goujon, et al.Weizhong Li, Menaka Narayanasamy, Jenny Martin, Teresa Miyar, Rodrigo Lopez posted to api bioinformatics ebi rest service webserver by neils on 2009-05-14 00:39:08 as along with 14 people and 1 group jeargle artaban421 n00c daforerog dswan guhjy cassj hryk fgibson operon fisherp druvus alaninmcr dullhunk Bioinformatics
	Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment. [My Copy] Trends in biotechnology (29 April 2009) by John H H. Phan, Richard A A. Moffitt, Todd H H. Stokes, et al.Jian Liu, Andrew N N. Young, Shuming Nie, May D D. Wang posted to bioinformatics biomarker cancer review technology by neils on 2009-05-07 00:53:04 as along with 2 people dullhunk nuin
	Computational biology for cardiovascular biomarker discovery. [My Copy] Briefings in bioinformatics (10 March 2009) by Francisco Azuaje, Yvan Devaux, Daniel Wagner posted to bioinformatics biomarker cardiovascular discovery disease review by neils on 2009-03-14 01:15:48 as along with 2 people fgibson nuin
	A suite of Perl modules for handling microarray data. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 8. (15 April 2008), pp. 1102-1103. by J. A. Morris, S. A. Gayther, I. J. Jacobs, C. Jones posted to bioinformatics microarray module perl software by neils on 2009-03-13 01:45:47 as along with 7 people isimpson daforerog guhjy wisdom_love brianb jfr AlexanderPico
	Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learnt from available microbial genomic resources? [My Copy] BMC Genomics, Vol. 10, No. 1. (2009) by Frederic Boyer, Gwennaele Fichant, Jeremie Berthod, Yves Vandenbrouck, Ina Attree posted to analysis bacteria bioinformatics genomics secretion type-vi by neils on 2009-03-12 22:20:36 as along with 1 person bjorns
	Performance of random forest when SNPs are in linkage disequilibrium [My Copy] BMC Bioinformatics, Vol. 10 (05 March 2009), 78. by Yan, Kathryn L. Lunetta posted to association bioinformatics disequilibrium linkage random-forest snp by neils on 2009-03-08 22:15:45 as along with 2 people guhjy rdiaz
	Sequence-based feature prediction and annotation of proteins. [My Copy] Genome biology, Vol. 10, No. 2. (2 February 2009) by Agnieszka S. Juncker, Lars J. Jensen, Andrea Pierleoni, et al.Andreas Bernsel, Michael L. Tress, Peer Bork, Gunnar von Heijne, Alfonso Valencia, Christos A. Ouzounis, Rita Casadio, Søren Brunak posted to annotation bioinformatics methods prediction protein review sequence by neils on 2009-02-02 23:24:56 as along with 5 people larsjuhljensen kgutwin nyyu shwu druvus
	Microblogging the ISMB: A New Approach to Conference Reporting [My Copy] PLoS Comput Biol, Vol. 5, No. 1. (30 January 2009), e1000263. by Neil Saunders, Pedro Beltrão, Lars Jensen, et al.Daniel Jurczak, Roland Krause, Michael Kuhn, Shirley Wu posted to bioinformatics blog conference friendfeed ismb report by neils on 2009-01-30 01:47:53 as along with 27 people and 6 groups suribe druvus chriswillmott colmryan daforerog stujohnson AJCann jobadge pfanderson Yanno ulrichs ehealthgr ashwinn takeha-e A_Olympia larsjuhljensen mlangill heliopais Gaetan CameronNeylon allysonlister dswan sjcockell fgibson dullhunk kshameer applebyb Dentistry eLearning in Leicester Web2 Semantic-Social-Networks Science 2.0 / Open Science logics of knowledge
	Better Bioinformatics Through Usability Analysis. [My Copy] Bioinformatics (Oxford, England) (9 December 2008) by Davide Bolchini, Anthony Finkelstein, Vito Perrone, Sylvia Nagl posted to analysis bioinformatics database usability webserver by neils on 2009-01-29 23:47:00 as along with 21 people and 1 group pekrau FabienneGranier guhjy svozil pkonings dbk rmhirsk niallhaslam renatomilani chrisamiller Yanno fgibson zimbo1 druvus allysonlister dswan behindtherabbit dullhunk sjcockell nuin jmeppley Bioinformatics
	Prediction of protein-protein interaction types using association rule based classification [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Sung H. Park, Jose Reyes, David Gilbert, Ji W. Kim, Sangsoo Kim posted to bioinformatics classification interaction prediction protein-protein by neils on 2009-01-28 23:18:46 as along with 4 people anf renatomilani grahamc higueruelo
	Accurate domain identification with structure-anchored hidden Markov models, saHMMs. [My Copy] Proteins, Vol. 76, No. 2. (11 December 2008), pp. 343-352. by Jeanette E. Tångrot, Bo Kågström, Uwe H. Sauer posted to bioinformatics domain hmm prediction protein by neils on 2009-01-28 23:17:36 as along with 1 person and 1 group AliC Orengo Group Journal Picks
	GRIP: A web-based system for constructing Gold Standard datasets for protein-protein interaction prediction [My Copy] Source Code for Biology and Medicine, Vol. 4, No. 1. (2009) by Fiona Browne, Haiying Wang, Huiru Zheng, Francisco Azuaje posted to bioinformatics dataset interaction prediction protein-protein web by neils on 2009-01-26 23:11:26 as
	Prediction of Nuclear Proteins using SVM and HMM Models [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Manish Kumar, Gajendra Raghava posted to bioinformatics hmm localisation nls nuclear prediction saac svn by neils on 2009-01-20 00:12:31 as along with 5 people firyarn84 mhamada grahamc mdstobbe druvus
	The SNPMaP package for R: a framework for genome-wide association using DNA pooling on microarrays. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 2. (15 January 2009), pp. 281-283. by Oliver S. Davis, Robert Plomin, Leonard C. Schalkwyk posted to association bioinformatics genomics microarray software statistics r-project by neils on 2009-01-15 23:47:28 as along with 7 people maren jfr Zephyrus daforerog guhjy djkt pkonings
	Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery [My Copy] Bioinformatics (9 January 2009), btn664. by Norman E. Davey, Denis C. Shields, Richard J. Edwards posted to bioinformatics discovery evolution linear masking motif prediction by neils on 2009-01-14 01:53:35 as along with 2 people nuin jameswasmuth
	Prion Disease Diagnosis by Proteomic Profiling [My Copy] Journal of Proteome Research, Vol. 0, No. 0. by Allen Herbst, Sean mcilwain, Joshua J. Schmidt, Judd M. Aiken, David C. Page, Lingjun Li posted to bioinformatics disease maldi prion profiling proteomics svm by neils on 2009-01-11 23:15:36 as
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted to annotation bioinformatics enrichment genomics review software by neils on 2009-01-10 02:07:31 as along with 44 people and 2 groups darian chasmand hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Stew inesdesantiago heliopais AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell Bioinformatics - CRUK ConklinLab
	Phosphorylation Site Mapping of Endogenous Proteins: A Combined MS and Bioinformatics Approach [My Copy] Journal of Proteome Research, Vol. 0, No. 0. by Jeffrey M. Sundstrom, Christopher J. Sundstrom, Scott A. Sundstrom, et al.Patrice E. Fort, Richard, Thomas W. Gardner, David A. Antonetti posted to bioinformatics maldi mapping ms phosphorylation protein by neils on 2009-01-07 23:30:16 as
	Large-scale prediction of long disordered regions in proteins using random forests [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Pengfei Han, Xiuzhen Zhang, Raymond Norton, Zhi P. Feng posted to bioinformatics disorder prediction protein random-forest by neils on 2009-01-07 23:27:39 as
	ISMB 2008 conference report [My Copy] Bioinformatics, Vol. 25, No. 1. (1 January 2009), pp. 144-146. by Clare Sansom posted to 2008 bioinformatics conference ismb report by neils on 2009-01-05 02:26:41 as along with 2 people fgibson dullhunk
	Bioinformatics: alive and kicking [My Copy] Genome Biology, Vol. 9 (17 December 2008), 114. by Lincoln D. Stein posted to bioinformatics commentary editorial by neils on 2008-12-18 12:30:24 as along with 16 people and 1 group jfr ilyashl imaginatio VGreiff renatomilani Zephyrus idoerg Yanno dandaman klo reyez dullhunk allysonlister fgibson kshameer druvus Roswell Cancer Crosstalk
	Prediction of Protein-Protein Interface Sequence Diversity Using Flexible Backbone Computational Protein Design [My Copy] Vol. 16, No. 12. (12 December 2008), pp. 1777-1788. by Elisabeth L. Humphris, Tanja Kortemme posted to backbone bioinformatics interaction interface prediction protein-protein proteins by neils on 2008-12-11 01:38:19 as
	Detection of Functionally Important Regions in Hypothetical Proteins of Known Structure [My Copy] Vol. 16, No. 12. (12 December 2008), pp. 1755-1763. by Guy Nimrod, Maya Schushan, David M. Steinberg, Nir Ben-Tal posted to bioinformatics function interaction prediction protein-protein proteins by neils on 2008-12-11 01:35:57 as
	Prediction of kinase-specific phosphorylation sites using Conditional Random Fields. [My Copy] Bioinformatics (Oxford, England) (20 October 2008) by Thanh Hai H. Dang, Koenraad Van V. Leemput, Alain Verschoren, Kris Laukens posted to bioinformatics kinase phosphorylation prediction random-fields specificity by neils on 2008-12-05 01:11:06 as along with 3 people gulkur coela guhjy
	SPOCTOPUS: A combined predictor of signal peptides and membrane protein topology. [My Copy] Bioinformatics (Oxford, England) (22 October 2008) by Hâkan Viklund, Andreas Bernsel, Marcin Skwark, Arne Elofsson posted to bioinformatics membrane peptide prediction protein signal software by neils on 2008-12-05 01:09:48 as along with 1 person grahamc
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted to bioinformatics metagenomics methods review by neils on 2008-12-04 23:38:52 as along with 39 people and 8 groups CorinYeats sconlan jasontsai halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces skembel inquil EKotlarska anphony stajich sharpton vrich vaulot adgrativol jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley Katje allysonlister skato_toyaku Orengo Group Journal Picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology Translational Bioinformatics Roswell Cancer Crosstalk microbiology_nijmegen
	Comprehensive analysis of affymetrix exon arrays using BioConductor. [My Copy] PLoS computational biology, Vol. 4, No. 2. (February 2008) by M. J. Okoniewski, C. J. Miller posted to affymetrix analysis bioconductor bioinformatics microarray software r-project by neils on 2008-12-02 04:49:49 as along with 7 people daveGerrard floatingpoint guhjy giovenko jfr chrisamiller eskay
	c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Katerina Kechris, Hao Li posted to bioinformatics correlation expression motif sequence by neils on 2008-11-29 05:55:22 as along with 6 people tmarscha heliopais GustavoLacerda maximilianh druvus Md_2007
	Metagenome Annotation Using a Distributed Grid of Undergraduate Students [My Copy] PLoS Biol, Vol. 6, No. 11. (25 November 2008), e296. by Pascal Hingamp, Céline Brochier, Emmanuel Talla, Daniel Gautheret, Denis Thieffry, Carl Herrmann posted to annotation bioinformatics distribution metagenomics software student by neils on 2008-11-26 03:22:38 as along with 17 people and 3 groups daforerog operon azazello Stew JustinCrocker nuin jmeppley xingxu guhjy nitiniitk dbikard dchughes druvus djkt ptrobajo dullhunk treangen Bioinformatics - CRUK Centre de Recherches Interdisciplinaires iSEEM
	Prediction of specificity-determining residues for small-molecule kinase inhibitors [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Daniel Caffrey, Elizabeth Lunney, Deborah Moshinsky posted to bioinformatics inhibitor kinase prediction protein residue specificity by neils on 2008-11-26 01:00:24 as along with 2 people reyez renatomilani
	mspire: Mass spectrometry proteomics in Ruby. [My Copy] Bioinformatics (Oxford, England) (16 October 2008) by John T T. Prince, Edward M M. Marcotte posted to bioinformatics mass-spec ruby software by neils on 2008-11-24 00:43:55 as along with 5 people brianb sjcockell dswan guhjy nuin
	Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 23. (1 December 2008), pp. 2672-2676. by T. Carver, M. Berriman, A. Tivey, et al.C. Patel, U. Böhme, B. G. Barrell, J. Parkhill, M. A. Rajandream posted to artemis bioinformatics comparative genomics software by neils on 2008-11-24 00:43:05 as along with 8 people and 1 group malcook guhjy dswan barriot pengchy jamselem treangen druvus SIMR bioinformatics
	SCOPPI: a structural classification of protein-protein interfaces [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_1. (2006), pp. D310-314. by Christof Winter, Andreas Henschel, Wan K. Kim, Michael Schroeder posted to bioinformatics database domain interaction protein-protein scop structure by neils on 2008-11-20 02:59:00 as
	Protein networks markedly improve prediction of subcellular localization in multiple eukaryotic species [My Copy] Nucl. Acids Res. (4 October 2008), gkn619. by Kiyoung Lee, Han-Yu Chuang, Andreas Beyer, et al.Min-Kyung Sung, Won-Ki Huh, Bonghee Lee, Trey Ideker posted to bioinformatics interaction localisation network prediction protein-protein subcellular by neils on 2008-11-13 10:50:54 as along with 5 people carlk brianb grahamc giovenko ptrobajo
	CoCoNUT: an efficient system for the comparison and analysis of genomes [My Copy] BMC Bioinformatics, Vol. 9 (12 November 2008), 476. by Mohamed I. Abouelhoda, Stefan Kurtz, Enno Ohlebusch posted to bioinformatics comparative genomics software tools by neils on 2008-11-13 10:42:23 as along with 6 people guhjy operon nuin natstreet druvus treangen
	Small non-coding RNAs in Streptomyces coelicolor [My Copy] Nucl. Acids Res. (12 November 2008), gkn898. by Julia P. Swiercz, Hindra, Jan Bobek, et al.Henry J. Haiser, Christina Di Berardo, Brian Tjaden, Marie A. Elliot posted to bioinformatics development expression ncrna streptomyces by neils on 2008-11-13 10:41:37 as
	The Ribosomal Database Project: improved alignments and new tools for rRNA analysis [My Copy] Nucl. Acids Res. (12 November 2008), gkn879. by J. R. Cole, Q. Wang, E. Cardenas, et al.J. Fish, B. Chai, R. J. Farris, A. S. Kulam-Syed-Mohideen, D. M. Mcgarrell, T. Marsh, G. M. Garrity, J. M. Tiedje posted to 16s bioinformatics database ribosome sequence software by neils on 2008-11-13 10:38:27 as along with 1 person vpittet
	Integrating biological databases [My Copy] Nat Rev Genet, Vol. 4, No. 5. (May 2003), pp. 337-345. by Lincoln D. Stein posted to bioinformatics database integration ontology review service by neils on 2008-11-13 03:42:04 as along with 10 people ptrobajo neilernst eweaver vaija laszlo8 hpiwowar fisherp lei cjeans rvosa
	GENETICS. The Human Variome Project. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5903. (7 November 2008), pp. 861-862. by Richard G. Cotton, Arleen D. Auerbach, Myles Axton, et al.Carol Isaacson I. Barash, Samuel F. Berkovic, Anthony J. Brookes, John Burn, Garry Cutting, Johan T. den Dunnen, Paul Flicek, Nelson Freimer, Marc S. Greenblatt, Heather J. Howard, Michael Katz, Finlay A. Macrae, Donna Maglott, Gabriela Möslein, Sue Povey, Rajkumar S. Ramesar, Carolyn S. Richards, Daniela Seminara, Timothy D. Smith, María-Jesús J. Sobrido, Jan Helge H. Solbakk, Rudolph E. Tanzi, Sean V. Tavtigian, Graham R. Taylor, Joji Utsunomiya, Michael Watson posted to australia bioinformatics disease genetics human variome by neils on 2008-11-11 01:22:24 as along with 6 people burak daforerog psique jfr reyez pkonings
	Prediction of signal peptides in archaea. [My Copy] Protein engineering, design & selection : PEDS (6 November 2008) by P G G. Bagos, K D D. Tsirigos, S K K. Plessas, T D D. Liakopoulos, S J J. Hamodrakas posted to archaea bioinformatics hmm peptide prediction secretion signal by neils on 2008-11-09 01:28:56 as
	A Computational Screen for Type I Polyketide Synthases in Metagenomics Shotgun Data [My Copy] PLoS ONE, Vol. 3, No. 10. (27 October 2008), e3515. by Konrad U. Foerstner, Tobias Doerks, Christopher J. Creevey, Anja Doerks, Peer Bork posted to bioinformatics metagenomics polyketide screen synthase by neils on 2008-10-26 01:55:31 as along with 1 person sconlan
	PEDANT covers all complete RefSeq genomes. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (21 January 2009), gkn749. by M. C. Walter, T. Rattei, R. Arnold, et al.U. Güldener, M. Münsterkötter, K. Nenova, G. Kastenmüller, P. Tischler, A. Wölling, A. Volz, N. Pongratz, R. Jost, H. W. Mewes, D. Frishman posted to analysis bioinformatics database genomics refseq by neils on 2008-10-22 13:24:30 as along with 3 people guhjy natstreet druvus
	Identification of hot-spot residues in protein-protein interactions by computational docking. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by Solène Grosdidier, Juan Fernández-Recio posted to bioinformatics docking interaction prediction protein-protein residue by neils on 2008-10-21 10:09:22 as along with 6 people ubcg08l pablocarb bicko grahamc higueruelo i000

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bioinformatics	196
protein	152
genomics	143
structure	132
kinase	129
prediction	113
phosphorylation	101
interaction	97
software	96
database	90
protein-protein	86
analysis	84
sequence	83
proteomics	80
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review	71
evolution	67
statistics	64
archaea	58
human	56
article-predikin	51
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network	45
genome	44
data	38
metagenomics	38
sequencing	36
webserver	36
specificity	35
peptide	34
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genetics	32
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binding	29
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article-pka-pkg	25
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r-project	23
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complex	20
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ecology	19
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yeast	19
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comparative	18
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cell	16
membrane	16
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phosphatase	10
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x-ray	10
affymetrix	9
algorithm	9
cgmp	9
data-mining	9
differential	9
for-thuber	9
metabolomics	9
microbial	9
motifs	9
pathways	9
proteome	9
recruitment	9
screen	9
structural-genomics	9
subcellular	9
svm	9
visualisation	9
akap	8
bird	8
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curation	8
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eukarya	8
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biology	7
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mycobacterium	4
nanoarcheum	4
nitrite	4
oxide	4
p110	4
parallel	4
pathogenesis	4
perl	4
practice	4
prion	4
protein-dna	4
pseudogene	4
report	4
reproducibility	4
selection	4
semantic	4
simulation	4
single-molecule	4
spectroscopy	4
src	4
streptococcus	4
techniques	4
tools	4
triphosphate	4
tyrosine	4
virulence	4
wiki	4
2d-dige	3
affinity	3
agriculture	3
api	3
apis	3
autism	3
bacillus	3
base	3
beta-adrenergic	3
biochemical	3
biofilm	3
biogenesis	3
biophysics	3
brain	3
career	3
cassette	3
chemical	3
climate	3
clinical	3
cluster	3
collaboration	3
computational-biology	3
contact	3
control	3
correspondence	3
cultured	3
degradation	3
dimerization	3
dinosaur	3
diversity	3
dna-binding	3
drosophila	3
dynamics	3
ecoli	3
electron-microscopy	3
errors	3
fish	3
graph	3
graphics	3
heat-shock	3
helicobacter	3
helix	3
hgt	3
high-throughput	3
histone	3
humour	3
image	3
impact-factor	3
import	3
inbred	3
introduction	3
isoenzymes	3
isoforms	3
journals	3
lims	3
linear	3
macrophage	3
malaria	3
methanococcus	3
migration	3
mouse	3
mutagenesis	3
nitric	3
normalization	3
npc	3
of	3
ontology	3
orfan	3
orthology	3
phylogenetics	3
physiology	3
pipeline	3
population	3
post-translational	3
probability	3
processing	3
programming	3
psi	3
psychrobacter	3
public	3
publishing	3
pyrosequencing	3
relationship	3
response	3
results	3
retrieval	3
roc	3
saccharomyces	3
screening	3
sensitivity	3
serine-protease	3
signature	3
streptomyces	3
sulfolobus	3
synthesis	3
systems-biology	3
tag	3
target	3
temperature	3
thermus	3
tissue	3
transfer	3
translation	3
transport	3
ubiquitin	3
variation	3
water	3
xml	3
adaptor	2
aethiops	2
agents	2
ajax	2
algae	2
anchor	2
anthropology	2
antibody	2
arctic	2
arginine	2
artificial	2
arxiv	2
automation	2
avian	2
bayesian	2
bee	2
behaviour	2
biomart	2
biotechnology	2
blog	2
bos-taurus	2
breast-cancer	2
c57bl	2
cardiac	2
carrier	2
cdk	2
centrality	2
cercopithecus	2
cerevisiae	2
chaperone	2
checkpoint	2
chip	2
citations	2
cloning	2
cloud-computing	2
coevolution	2
coexpression	2
cold	2
coli	2
colorectal	2
complementary	2
complex-i	2
compounds	2
computer-assisted	2
consensus	2
context	2
co-occurrence	2
copy-number	2
correlation	2
covariance	2
cow	2
cryo-em	2
curve	2
cycle	2
dengue	2
detection	2
development	2
disulphide	2
dog	2
duplication	2
ebi	2
electron	2
electrophoresis	2
electrophysiology	2
embryo	2
endoplasmic	2
enterococcus	2
epigenetics	2
escherichia	2
evaluation	2
extracellular	2
feature	2
female	2
fold	2
fragments	2
framework	2
friendfeed	2
global	2
glycosylation	2
gmp-dependent	2
google	2
g-protein-coupled	2
greenland	2
haloferax	2
history	2
horizontal	2
hupo	2
identification	2
ignicoccus	2
illumina	2
immunology	2
industry	2
infrastructure	2
insect	2
intelligence	2
intracellular	2
introns	2
in-vivo	2
ismb	2
javascript	2
lead	2
leucine	2
lgt	2
lichen	2
lie	2
ligases	2
lrr	2
lymphocyte	2
maldi	2
mammal	2
matrix	2
md	2
mechanism	2
medicine	2
metadata	2
metalloprotein	2
methylation	2
methylotrophy	2
mobile	2
model	2
modification	2
ms-ms	2
multiprotein	2
muscle	2
myxobacteria	2
neural	2
neural-network	2
nitrous	2
nnr	2
obesity	2
operon	2
optimisation	2
organisation	2
organism	2
osmotic	2
p21-activated	2
pagerank	2
pattern	2
pdz	2
peptidase	2
peroxidase	2
personalised	2
pfam	2
phosphopeptide	2
photosynthesis	2
pichia	2
platypus	2
polo	2
polyketide	2
portal	2
potential	2
predikin	2
pressure	2
probe	2
promoter	2
protease	2
protein-ligand	2
proteins	2
psychology	2
pwm	2
python	2
reaction	2
rearrangement	2
refinement	2
region	2
repair	2
repressor	2
reticulum	2
rhodopsin	2
rice	2
ruby	2
salivary	2
salmon	2
sciences	2
selenocysteine	2
sensing	2
serpin	2
sh3	2
short-read	2
similarity	2
site-directed	2
snake	2
solubility	2
sorting	2
species	2
squid	2
structural	2
superfamily	2
survival	2
synthase	2
targeting	2
t-cell	2
teaching	2
threonine	2
tomography	2
topic	2
toxin	2
transducing	2
translocation	2
t-rex	2
tumor	2
twitter	2
ubiquitin-protein	2
vertebrate	2
virtual	2
workflow	2
xanthomonas	2
14-3-3	1
145-trisphosphate	1
16s	1
2008	1
23andme	1
2d-page	1
454	1
90-kda	1
abiogenesis	1
abl	1
abscisic	1
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acidithiobacillus	1
acidophily	1
advice	1
aeromonas	1
agrobacterium	1
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allele	1
allosteric	1
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alphaproteobacteria	1
amazon	1
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amt	1
amyloid	1
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apoptosis	1
array	1
arrayexpress	1
artemis	1
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as	1
aspergillus	1
astrobiology	1
atlantic	1
atpase	1
attachment	1
attribution	1
auc	1
aurora-a	1
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authorship	1
autodock	1
autographa	1
autoinhibition	1
automated	1
avexis	1
backbone	1
balb	1
barophile	1
basic-leucine	1
bayes	1
benchmark	1
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beta-propeller	1
bibliography	1
biochemistry	1
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bioenergetics	1
bioleaching	1
biomass	1
biome	1
biomechanics	1
biopython	1
biosynthesis	1
biosysbio	1
bipartite	1
bisulphite	1
blood	1
bodo	1
book	1
bovine	1
brachypodium	1
brenda	1
bull	1
business	1
c1	1
c-552	1
ca2-calmodulin	1
caenorhabditis	1
calcium-calmodulin-dependent	1
calculation	1
cane-toad	1
carbohydrate	1
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cardiovascular	1
casein	1
casp	1
caspase	1
cattle	1
cca	1
cd3	1
cd98	1
cdc2	1
cdna	1
cellulose	1
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cessation	1
cftr	1
charge	1
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chlamydia	1
chlamydomonas	1
chlorides	1
chordate	1
chromatin	1
chromosome	1
cid	1
circadian	1
circular	1
citrate	1
c-jun	1
class-i	1
class-ii	1
cleavage	1
clic	1
clinical_trial	1
clock	1
cm552	1
cms	1
cns	1
cnv	1
codon	1
coenzyme	1
colon	1
colonisation	1
colony-collapse-disorder	1
colwellia	1
communication	1
complexity	1
compression	1
confidence	1
consortia	1
controlled	1
conversion	1
copy	1
core	1
cost	1
coturnix	1
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crohns	1
crops	1
crosstalk	1
cryoprotection	1
culture	1
cupriavidus	1
cyclin	1
cyclin-dependent	1
cysteine	1
cytoplasmic	1
cytoscape	1
cytoskeletal	1
cytosol	1
dal5	1
damage	1
decision-tree	1
defence	1
demospongiae	1
denitrification	1
densitometry	1
dependent	1
depression	1
dft	1
dgs	1
dhfr	1
dichroism	1
differentiation	1
diffraction	1
dipz	1
directory	1
discrimination	1
discussion	1
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distance	1
dmrt1	1
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draft	1
duct	1
dus	1
ec2	1
editing	1
education	1
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elements	1
eln	1
elysia	1
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encode	1
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engineering	1
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ensembl	1
entamoeba	1
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environmental	1
envz	1
enyzme	1
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epidermal	1
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epithelial	1
epr	1
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erythrocyte	1
essay	1
est	1
estimation	1
estuarine	1
ethylene	1
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europe	1
exiguobacterium	1
experimental	1
extinct	1
extinction	1
extremophile	1
fabrication	1
factor	1
factor-2	1
fairy-wren	1
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familial	1
fda	1
fdr	1
feedback	1
fermentation	1
fgfr	1
fha	1
fibroblast	1
fkbp	1
flash	1
flavour	1
flippase	1
fluid	1
foldx	1
food	1
force-field	1
fosfomycin	1
fractions	1
fraud	1
freezing	1
freshwater	1
galaxy	1
gecko	1
gemmata	1
geo	1
geobacter	1
geochemistry	1
geochip	1
geography	1
gis	1
glam2	1
gluconacetobacter	1
glucose	1
glucosidase	1
glutathione	1
glycogen	1
glycomics	1
gmod	1
gmp	1
godwit	1
gos	1
gpi	1
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gpu	1
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gui	1
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halorhabdus	1
halothermothrix	1
haspin	1
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herminiimonas	1
histidine-kinase	1
hiv	1
hmmer	1
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host	1
hotdog	1
hpc	1
hsp70	1
hsp90	1
humdisease	1
hybridization	1
hydrothermal	1
hypertension	1
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icat	1
ice	1
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ignobel	1
imac	1
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imaging	1
img	1
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in	1
india	1
infection	1
infernal	1
initiation	1
injury	1
innovation	1
inositol	1
in-situ	1
insulin	1
integrin	1
integron	1
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interpretation	1
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intestine	1
invasive	1
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ion-channel	1
ionophores	1
irak	1
irs	1
isoform	1
isolation	1
isotope	1
iubmb	1
kernel	1
kidney	1
kinetoplastid	1
knockout	1
knowledgebase	1
koryarchaeota	1
koryarchaeum	1
labelling	1
laccaria	1
lactase	1
lactobacillus	1
lake-vostok	1
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lasso	1
leishmania	1
leptospira	1
letter	1
ligand-gated	1
limosa	1
lincrna	1
linear-model	1
linkage	1
liquid	1
liver	1
lod	1
loop	1
lsid	1
luciferase	1
m2	1
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magnetic	1
mammoth	1
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mapk	1
mapreduce	1
maps	1
mark	1
markup	1
mashup	1
masking	1
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maturation	1
measurement	1
medline	1
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methanocaldococcus	1
methanogenesis	1
methanogenium	1
methanogens	1
metrics	1
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microblogging	1
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mint	1
mites	1
mitogens	1
mitosis	1
moby	1
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monophosphate	1
motion	1
mpsk1	1
ms	1
mutant	1
mycorrhizae	1
myocytes	1
myod	1
names	1
natronomonas	1
natural-product	1
nb-arc	1
ncbi	1
neandertal	1
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negative	1
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netphosk	1
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news	1
newzealand	1
nih	1
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nirs	1
nirx	1
nitrification	1
nitrogen_fixation	1
nitrosomonas	1
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nosx	1
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nsrr	1
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nucleolus	1
nucleoporin	1
nucleotide	1
nucpred	1
number	1
nup	1
ocean	1
oceania	1
oceanography	1
ogt	1
oligomeric	1
oligotrophy	1
oncogene	1
online	1
opsin	1
oreilly	1
orf	1
orfs	1
organ	1
organophosphorus	1
origin	1
oryza	1
oscillation	1
outreach	1
owl	1
p38	1
p56lck	1
p85	1
pacific	1
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par1	1
patch-clamp	1
pb2	1
pca	1
pdbml	1
pellino	1
peptidoglycan	1
periodicity	1
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phage	1
phenylobacterium	1
phone	1
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phosphotransferase	1
physics	1
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pilus	1
pkc	1
pkn1	1
pks	1
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plasmid	1
plastid	1
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policy	1
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porin	1
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production	1
profile	1
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prostate	1
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protocol	1
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prozac	1
pseudoalteromonas	1
psi-blast	1
pssm	1
psychromonas	1
ptm	1
pubmed	1
pyrobaculum	1
pyrococcus	1
qc	1
quail	1
quaternary	1
queensland	1
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quick-guide	1
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radioisotope	1
ran	1
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rank	1
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rast	1
ray	1
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real-time	1
recognition	1
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repetitive	1
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resolution	1
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respiratory	1
rest	1
retinoblastoma	1
retroelement	1
reverse-transcriptase	1
rfam	1
rhinovirus	1
rhizobia	1
rhodothermus	1
ribonuclease	1
ribosomal	1
rigid-body	1
rnai	1
rnasep	1
roc_curve	1
rosetta	1
rpon	1
s6	1
saac	1
saccharomycetales	1
salmonella	1
sars	1
satellite	1
sativa	1
scent	1
schema	1
schistosoma	1
scop	1
score	1
scoring	1
scrubwren	1
sea-slug	1
sec	1
secis	1
serrated	1
serum	1
sex-determination	1
sh2	1
shewanella	1
significance	1
silac	1
silica	1
single-cell	1
situ	1
s-layer	1
sm	1
smad7	1
small	1
smoking	1
smooth	1
snorkel	1
soap	1
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social-networking	1
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solexa	1
song	1
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specific	1
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srp	1
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stitch	1
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tap	1
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tet	1
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thylacine	1
tiling	1
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tomato	1
toxicity	1
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transcript	1
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transferase	1
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treponema	1
trials	1
trichostrongylus	1
trigger	1
tunicamycin	1
type	1
type-iii	1
type-iv	1
type-vi	1
tyrannosaurus	1
ultramicrobacteria	1
ultraviolet	1
uncertainty	1
unicellular	1
univariate	1
update	1
uptake	1
uq	1
usability	1
usage	1
utrs	1
uv	1
vaccination	1
validation	1
variome	1
vasoactive	1
vasodilator	1
venom	1
vibrio	1
viking	1
vocabulary	1
voltage-gated	1
web_service	1
weights	1
wheat	1
workplace	1
wortmannin	1
wwpdb	1
xenopus	1
zebrafinch	1
zebrafish	1
zimmer	1
zipper	1
znf	1
zoarces	1
zymomonas	1

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