CiteULike: neils's substrate [33 articles]

	Structure-based substrate screening for an enzyme [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 257. by Tao Xu, Lujia Zhang, Xuedong Wang, Dongzhi Wei, Tianbi Li posted to substrate structure screening prediction enzymology docking by neils on 2009-08-21 03:30:09 as
	From Promiscuity to Precision: Protein Phosphatases Get a Makeover [My Copy] Molecular Cell, Vol. 33, No. 5. (13 March 2009), pp. 537-545. by David M. Virshup, Shirish Shenolikar posted to phosphatase review specificity substrate by neils on 2009-07-02 03:31:36 as along with 2 people kiekyon coela
	Identification of Serine/Threonine Kinase Substrates in the Human Pathogen Group B Streptococcus [My Copy] Journal of Proteome Research, Vol. 0, No. 0. (0000) by Aurelio Silvestroni, Kelsea A. Jewell, Wan-Jung Lin, et al.James E. Connelly, Melanie M. Ivancic, Andy W. Tao, Lakshmi Rajagopal posted to bacteria human kinase pathogen protein-serine-threonine proteomics streptococcus substrate by neils on 2009-04-11 17:17:07 as
	Molecular Bases for the Recognition of Short Peptide Substrates and Cysteine-Directed Modifications of Human Insulin-Degrading Enzyme [My Copy] Biochemistry (6 November 2008) by Enrico Malito, Luis A. Ralat, Marika Manolopoulou, Julie L. Tsay, Natasha L. Wadlington, Wei-Jen Tang posted to cysteine degradation enzymology insulin peptide specificity substrate by neils on 2008-11-07 01:58:11 as
	PMAP: databases for analyzing proteolytic events and pathways [My Copy] Nucl. Acids Res. (8 October 2008), gkn683. by Yoshinobu Igarashi, Emily Heureux, Kutbuddin S. Doctor, et al.Priti Talwar, Svetlana Gramatikova, Kosi Gramatikoff, Ying Zhang, Michael Blinov, Salmaz S. Ibragimova, Sarah Boyd, Boris Ratnikov, Piotr Cieplak, Adam Godzik, Jeffrey W. Smith, Andrei L. Osterman, Alexey M. Eroshkin posted to database pathways protease specificity substrate by neils on 2008-10-09 03:20:27 as
	Gain and loss of phosphorylation sites in human cancer [My Copy] Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i241-247. by Predrag Radivojac, Peter H. Baenziger, Maricel G. Kann, Matthew E. Mort, Matthew W. Hahn, Sean D. Mooney posted to cancer human mutation phosphorylation substrate by neils on 2008-08-11 00:38:19 as along with 3 people oelemento chunjean brianb
	Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites [My Copy] BMC Bioinformatics, Vol. 9 (26 May 2008), 245. by Neil F. W. Saunders, Ross I. Brinkworth, Thomas Huber, Bruce E. Kemp, Bostjan Kobe posted to bioinformatics prediction predikin specificity substrate kinase by neils on 2008-05-27 05:06:18 as along with 1 person guhjy
	Structural Basis of Substrate Recognition in Thiopurine S-Methyltransferase [My Copy] Biochemistry (17 May 2008) by Yi Peng, Qiping Feng, Dennis Wilk, et al.Araba A. Adjei, Oreste E. Salavaggione, Richard M. Weinshilboum, Vivien C. Yee posted to enzyme specificity structure-activity substrate by neils on 2008-05-19 02:49:04 as
	Activation segment dimerization: a mechanism for kinase autophosphorylation of non-consensus sites [My Copy] The EMBO Journal, Vol. aop, No. current. (31 January 2008) by Ashley C. W. Pike, Peter Rellos, Frank H. Niesen, et al.Andrew Turnbull, Antony W. Oliver, Sirlester A. Parker, Benjamin E. Turk, Laurence H. Pearl, Stefan Knapp posted to activation dimerization phosphorylation substrate kinase by neils on 2008-02-02 14:17:02 as along with 1 person anwazo
	Yeast Polo-like kinase substrates are nailed with the right tools [My Copy] Genome Biology, Vol. 9, No. 1. (2008) by Vincent Archambault, David Glover posted to bioinformatics polo screen specificity yeast kinase substrate by neils on 2008-01-31 00:13:28 as
	Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment. [My Copy] Cell Cycle, Vol. 4, No. 1. (Jan 2005), pp. 52-56. by Guozhi Zhu, Yin Liu, Stephen Shaw posted to activation article-predikin enzyme fragments interaction mapping peptide phosphorylation protein sequence signal specificity substrate transduction amino-acid kinase human by neils on 2007-12-04 03:22:14 as
	GPS: a comprehensive www server for phosphorylation sites prediction. [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W184-W187. by Yu Xue, Fengfeng Zhou, Minjie Zhu, Kashif Ahmed, Guoliang Chen, Xuebiao Yao posted to analysis article-nar article-predikin internet microfilament phosphorylation protein sequence software specificity substrate tissue kinase phosphoprotein by neils on 2007-12-04 03:22:14 as
	Centrosomal anchoring of the protein kinase CK1delta mediated by attachment to the large, coiled-coil scaffolding protein CG-NAP/AKAP450. [My Copy] J Mol Biol, Vol. 322, No. 4. (Sep 2002), pp. 785-797. by James E. Sillibourne, Diane M. Milne, Mikiko Takahashi, Yoshitaka Ono, David W. Meek posted to adaptor aethiops anchor article-predikin carrier casein catalysis centrosome cercopithecus cos cytoskeletal data fractions fragments fusion isoenzymes kinase male molecular peptide precipitin protein recombinant sequence signal specificity structure subcellular substrate tertiary tests transducing amino-acid rat cell animal human by neils on 2007-12-04 03:22:14 as
	How do protein kinases recognize their substrates? [My Copy] Biochim Biophys Acta, Vol. 1314, No. 3. (Dec 1996), pp. 191-225. by L. A. Pinna, M. Ruzzene posted to article-predikin consensus data library molecular peptide phosphorylation protein sequence specificity substrate amino-acid kinase animal by neils on 2007-12-04 03:22:14 as
	Substrate specificity of protein kinases and computational prediction of substrates. [My Copy] Biochim Biophys Acta, Vol. 1754, No. 1-2. (Dec 2005), pp. 200-209. by Bostjan Kobe, Thorsten Kampmann, Jade K. Forwood, Pawel Listwan, Ross I. Brinkworth posted to article-nar article-predikin binding biology computational models molecular phosphoprotein phosphorylation protein secondary sites specificity structure substrate kinase peptide phosphatase by neils on 2007-12-04 03:22:13 as
	Biochemical characterization of the tobacco 42-kD protein kinase activated by osmotic stress. [My Copy] Plant Physiol, Vol. 136, No. 2. (Oct 2004), pp. 3255-3265. by Anna Kelner, Izabela Pekala, Szymon Kaczanowski, Grazyna Muszynska, Grahame D. Hardie, Grazyna Dobrowolska posted to activation adenosine article-predikin calcium chlorides data enzyme evolution homology kinase magnesium manganese molecular monophosphate osmotic phylogeny pressure protein sequence specificity substrate tobacco water amino-acid inhibitor by neils on 2007-12-04 03:22:13 as
	C-terminal repeat domain kinase I phosphorylates Ser2 and Ser5 of RNA polymerase II C-terminal domain repeats. [My Copy] J Biol Chem, Vol. 279, No. 24. (Jun 2004), pp. 24957-24964. by Janice C. Jones, Hemali P. Phatnani, Timothy A. Haystead, Justin A. Macdonald, Munir S. Alam, Arno L. Greenleaf posted to article-predikin data molecular monoclonal phosphorylation polymerase protein repetitive rna saccharomycetales sequence serine specificity substrate amino-acid kinase antibody by neils on 2007-12-04 03:22:13 as
	Characterization of cyclin L2, a novel cyclin with an arginine/serine-rich domain: phosphorylation by DYRK1A and colocalization with splicing factors. [My Copy] J Biol Chem, Vol. 279, No. 6. (Feb 2004), pp. 4612-4624. by Katrin de Graaf, Paul Hekerman, Oliver Spelten, et al.Andreas Herrmann, Len C. Packman, Konrad Büssow, Gerhard M. Newen, Walter Becker posted to arginine article-predikin base cell complementary cos data dna factors fusion male mice molecular nucleus phosphorylation protein protein-serine-threonine protein-tyrosine recombinant rna sequence serine specificity splicing structure substrate tertiary transcription amino-acid rat kinase animal human cyclin by neils on 2007-12-04 03:22:12 as
	Phosphorylation of the mitochondrial protein Sab by stress-activated protein kinase 3. [My Copy] Biochem Biophys Res Commun, Vol. 319, No. 1. (Jun 2004), pp. 130-137. by Naomi W. Court, Ivana Kuo, Oonagh Quigley, Marie A. Bogoyevitch posted to adaptor article-predikin binding cardiac carrier cell glutathione jnk kinase line map mitochondria mitogen-activated mutagenesis mutation myocytes phosphorylation protein serine signal signaling site-directed specificity structure substrate system tertiary transducing transferase rat human animal by neils on 2007-12-04 03:22:12 as
	Protein kinases associated with the yeast phosphoproteome. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by Ross I. Brinkworth, Alan L. Munn, Bostjan Kobe posted to alignment analysis article-predikin cerevisiae data interaction mapping molecular phosphorylation protein proteome saccharomyces sequence specificity substrate amino-acid fungi kinase phosphoprotein by neils on 2007-12-04 03:22:12 as
	Uses for JNK: the many and varied substrates of the c-Jun N-terminal kinases. [My Copy] Microbiol Mol Biol Rev, Vol. 70, No. 4. (Dec 2006), pp. 1061-1095. by Marie A. Bogoyevitch, Bostjan Kobe posted to article-predikin biological jnk mitogen-activated models protein signal specificity substrate transduction human kinase animal by neils on 2007-12-04 03:22:11 as
	Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. [My Copy] J Mol Biol, Vol. 294, No. 5. (Dec 1999), pp. 1351-1362. by N. Blom, S. Gammeltoft, S. Brunak posted to article-nar article-predikin binding computer consensus eukaryotic glycosylation models molecular motifs neural nuclear of phosphorylation phylogeny protein reproducibility results sensitivity sequence serine sites specificity structure substrate tertiary threonine trans-activators tyrosine amino-acid cell animal phosphoprotein network by neils on 2007-12-04 03:22:11 as
	Structural basis and prediction of substrate specificity in protein serine/threonine kinases. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 1. (Jan 2003), pp. 74-79. by Ross I. Brinkworth, Robert A. Breinl, Bostjan Kobe posted to article-nar article-pka-pkg specificity substrate by neils on 2007-12-04 01:53:36 as
	A-kinase anchoring proteins take shape. [My Copy] Curr Opin Cell Biol, Vol. 19, No. 2. (April 2007), pp. 192-198. by D. L. Beene, J. D. Scott posted to akap camp kinase signaling article-pka-pkg substrate by neils on 2007-12-02 08:14:04 as along with 1 person guhjy
	Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment. [My Copy] Cell Cycle, Vol. 4, No. 1. (January 2005), pp. 52-56. by G. Zhu, Y. Liu, S. Shaw posted to kinase recruitment specificity article-pka-pkg substrate by neils on 2007-12-02 08:12:24 as
	Restricted diffusion of a freely diffusible second messenger: mechanisms underlying compartmentalized cAMP signalling. [My Copy] Biochem Soc Trans, Vol. 34, No. Pt 4. (August 2006), pp. 495-497. by M. Zaccolo, G. Di Benedetto, V. Lissandron, L. Mancuso, A. Terrin, I. Zamparo posted to akap camp kinase recruitment substrate by neils on 2007-12-02 08:02:37 as along with 2 people and 1 group pgastrein dark_innocent neurolit
	Intracellular targeting of protein kinases and phosphatases. [My Copy] Diabetes, Vol. 51 Suppl 3 (December 2002) by N. Alto, J. J. Carlisle Michel, K. L. Dodge, L. K. Langeberg, J. D. Scott posted to akap camp kinase recruitment signaling substrate by neils on 2007-12-02 07:09:46 as
	A-kinase anchoring proteins: protein kinase A and beyond. [My Copy] Curr Opin Cell Biol, Vol. 12, No. 2. (April 2000), pp. 217-221. by A. S. Edwards, J. D. Scott posted to akap kinase recruitment signaling substrate by neils on 2007-12-02 07:09:00 as
	The biological functions of A-kinase anchor proteins. [My Copy] J Mol Biol, Vol. 308, No. 2. (27 April 2001), pp. 99-114. by A. Feliciello, M. E. Gottesman, E. V. Avvedimento posted to akap camp kinase recruitment signaling substrate by neils on 2007-12-02 07:07:59 as
	PKA: a portrait of protein kinase dynamics [My Copy] Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1697, No. 1-2. (11 March 2004), pp. 259-269. by S. Taylor, J. Yang, J. Wu, N. Haste, E. Radzio-Andzelm, G. Anand posted to akap camp kinase recruitment signaling substrate by neils on 2007-12-02 07:06:10 as along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
	Signaling through cAMP and cAMP-dependent protein kinase: Diverse strategies for drug design. [My Copy] Biochim Biophys Acta (12 October 2007) by Susan S S. Taylor, Choel Kim, Cecilia Y Y. Cheng, Simon H J H. Brown, Jian Wu, Natarajan Kannan posted to akap camp docking kinase recruitment article-pka-pkg substrate by neils on 2007-12-02 06:39:37 as along with 1 person guhjy
	Localized effects of cAMP mediated by distinct routes of protein kinase A. [My Copy] Physiol Rev, Vol. 84, No. 1. (January 2004), pp. 137-167. by K. Taskén, E. M. Aandahl posted to camp kinase recruitment signaling substrate by neils on 2007-12-01 06:07:17 as along with 1 person and 1 group dark_innocent neurolit
	Cyclic GMP-dependent protein kinase substrates in rat brain. [My Copy] J Neurochem, Vol. 65, No. 2. (August 1995), pp. 595-604. by X. Wang, P. J. Robinson posted to cgmp kinase substrate by neils on 2007-11-21 06:40:01 as

neils's substrate [33 articles] Export

neils's tags

bioinformatics	196
protein	149
genomics	137
structure	130
kinase	127
prediction	111
phosphorylation	101
interaction	96
software	96
protein-protein	85
database	83
sequence	83
analysis	82
proteomics	80
bacteria	76
review	69
evolution	67
statistics	63
archaea	58
human	53
article-predikin	51
microarray	46
network	45
genome	44
metagenomics	38
data	37
sequencing	36
webserver	36
specificity	35
peptide	34
domain	33
substrate	33
mass-spec	32
genetics	31
phylogeny	30
binding	29
expression	29
virus	29
article-pka-pkg	25
function	25
regulation	25
annotation	24
enzyme	24
signal	24
amino-acid	23
pathogen	23
r-project	23
molecular	22
psychrophily	21
signaling	21
complex	20
crystallography	20
disease	20
alignment	19
gene	19
localisation	19
next-generation	19
transcriptomics	19
yeast	19
animal	18
ecology	18
article-nar	17
comparative	17
tertiary	17
transduction	17
cell	16
membrane	16
nuclear	16
nls	15
prokaryotic	15
secretion	15
transcription	15
classification	14
integration	14
phosphoprotein	14
plant	14
protein-serine-threonine	14
sites	14
homology	13
interface	13
internet	13
modelling	13
models	13
pi3k	13
activation	12
adaptation	12
camp	12
cancer	12
computational	12
discovery	12
docking	12
mapping	12
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methods	12
prokaryote	12
antarctic	11
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biomarker	11
comparison	11
cytochrome	11
dna	11
enzymology	11
microbiology	11
opinion	11
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phosphatase	10
rna	10
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cgmp	9
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for-thuber	9
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screen	9
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svm	9
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akap	8
bird	8
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thermal	8
assembly	7
biology	7
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receptor	7
resistance	7
rio	7
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activity	6
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chromatography	6
editorial	6
exon	6
factors	6
folding	6
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lc-ms	6
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mirna	6
mitochondria	6
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phosphopeptides	6
polymerase	6
rat	6
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serine	6
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surface	6
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web	6
adenosine	5
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random-forest	5
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cultured	3
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dna-binding	3
drosophila	3
dynamics	3
ecoli	3
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errors	3
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as	1
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in	1
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ogt	1
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znf	1
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zymomonas	1