niallhaslam's structure-prediction [24 articles] Export Sort

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	Epitopia: a web-server for predicting B-cell epitopes [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (14 September 2009), 287. by Nimrod Rubinstein, Itay Mayrose, Eric Martz, Tal Pupko posted to web_server structure-prediction structure protein_structure protein_sequence prediction_tools immunoinformatics immunogenicity epitope_prediction epitope computational_tool cell_epitopes b_cell by niallhaslam on 2009-09-16 12:08:27 as
	Predicting transmembrane protein topology with a hidden markov model: application to complete genomes1 [My Copy] Journal of Molecular Biology, Vol. 305, No. 3. (19 January 2001), pp. 567-580. by Anders Krogh, Björn Larsson, Gunnar von Heijne, Erik L. L. Sonnhammer posted to das prediction structure-prediction transmembrane by niallhaslam on 2009-07-13 16:05:41 as along with 11 people azazello tfuji katholt thaliana bjorns andreasauerwein j3xucite happy_manatee massivemayhem twenta sebk
	PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. [My Copy] Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006) by M. Amico, M. Finelli, I. Rossi, et al.A. Zauli, A. Elofsson, H. Viklund, G. von Heijne, D. Jones, A. Krogh, P. Fariselli, P. Luigi Martelli, R. Casadio posted to das modular-architecture structure structure-prediction transmembrane webservices by niallhaslam on 2009-07-13 16:02:59 as along with 1 person xingxu
	The unfoldomics decade: an update on intrinsically disordered proteins. [My Copy] BMC genomics, Vol. 9 Suppl 2 (2008) by A. K. Dunker, C. J. Oldfield, J. Meng, et al.P. Romero, J. Y. Yang, J. W. Chen, V. Vacic, Z. Obradovic, V. N. Uversky posted to disorder structure-prediction by niallhaslam on 2009-07-09 17:03:47 as along with 6 people kiekyon robfsouza carlosjavierna guhjy higueruelo chad_davis
	Close encounters of the third kind: disordered domains and the interactions of proteins [My Copy] BioEssays, Vol. 31, No. 3. (3 March 2009), pp. 328-335. by Peter Tompa, Monika Fuxreiter, Christopher J. Oldfield, Istvan Simon, A. Keith Dunker, Vladimir N. Uversky posted to disorder structure-prediction by niallhaslam on 2009-07-09 16:30:03 as along with 3 people kiekyon higueruelo zwang
	A careful disorderliness in the proteome: Sites for interaction and targets for future therapies [My Copy] FEBS Letters, Vol. 582, No. 8. (09 April 2008), pp. 1271-1275. by R RUSSELL,, T GIBSON, posted to disorder drug-target structure-prediction by niallhaslam on 2009-07-09 16:29:31 as along with 8 people eannaokeefe cat_hutchinson68 guhjy Evangelia robrussell higueruelo kluck chad_davis
	Basic charge clusters and predictions of membrane protein topology. [My Copy] Journal of chemical information and computer sciences, Vol. 42, No. 3. (n 2002), pp. 620-632. by D. Juretić, L. Zoranić, D. Zucić posted to das split structure-prediction transmembrane by niallhaslam on 2009-02-12 11:06:17 as
	The DISOPRED server for the prediction of protein disorder. [My Copy] Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2138-2139. by J. J. Ward, L. J. McGuffin, K. Bryson, B. F. Buxton, D. T. Jones posted to disorder iup prediction structure structure-prediction by niallhaslam on 2009-02-12 10:07:00 as along with 1 person chad_davis
	Predicting protein disorder by analyzing amino acid sequence. [My Copy] BMC genomics, Vol. 9 Suppl 2 (2008) by J. Y. Yang, M. Q. Yang posted to disorder protein structure-prediction by niallhaslam on 2008-12-18 10:14:57 as
	The Rough Guide to In Silico Function Prediction, or How To Use Sequence and Structure Information To Predict Protein Function [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (31 October 2008), e1000160. by Marco Punta, Yanay Ofran posted to protein sequence-analysis structure-prediction by niallhaslam on 2008-12-17 09:28:16 as along with 20 people and 1 group ucbcjbm pansapiens kiekyon Thaverkamp daforerog Zalanszabo bpcusack Katje joseph_x_zhou taguchi sjcockell markchen ptrobajo chad_davis druvus mdstobbe giovenko nilanjanroy reyez GeeSharpMinor microbiology_nijmegen
	Identification of Intrinsically Unstructured Proteins using hierarchical classifier. [My Copy] International journal of data mining and bioinformatics, Vol. 2, No. 2. (2008), pp. 121-133. by J. Y. Yang, M. Q. Yang posted to benchmarking disorder domains structure-prediction by niallhaslam on 2008-10-24 10:25:12 as
	PIGS: Automatic prediction of antibody structures [My Copy] Bioinformatics (19 July 2008), btn341. by Paolo Marcatili, Alessandra Rosi, Anna Tramontano posted to antibodies antibody antigen-prediction structure-prediction by niallhaslam on 2008-09-16 14:41:11 as along with 1 person zwang
	PURE: a webserver for the prediction of domains in unassigned regions in proteins [My Copy] BMC Bioinformatics, Vol. 9 (14 June 2008), 281. by Chilamakuri C. S. Reddy, Shameer Khader, Bernard O. Offmann, Ramanthan Sowdhamini posted to domains modular-architecture protein-design structure-prediction by niallhaslam on 2008-06-25 09:19:12 as along with 1 person neils
	TOPDOM: database of domains and motifs with conservative location in transmembrane proteins. [My Copy] Bioinformatics (Oxford, England) (23 April 2008) by Gábor E E. Tusnády, Lajos Kalmár, Hédi Hegyi, Péter Tompa, István Simon posted to disorder domains modular-architecture protein-design structure-prediction by niallhaslam on 2008-06-25 09:09:42 as along with 3 people cabbagesofdoom gulkur guhjy
	Prediction of disordered regions in proteins based on the meta approach [My Copy] Bioinformatics (20 April 2008), btn195. by Takashi Ishida, Kengo Kinoshita posted to disorder partially-structured structure-prediction by niallhaslam on 2008-06-25 09:08:21 as along with 1 person and 1 group chad_davis structural_bioinformatics
	A partially structured region of a largely unstructured protein, Plasmodium falciparum merozoite surface protein 2 (MSP2), forms amyloid-like fibrils. [My Copy] Journal of peptide science : an official publication of the European Peptide Society, Vol. 13, No. 12. (December 2007), pp. 839-848. by X. Yang, C. G. Adda, D. W. Keizer, et al.V. J. Murphy, M. M. Rizkalla, M. A. Perugini, D. C. Jackson, R. F. Anders, R. S. Norton posted to disorder domains modular-architecture partially-structured structure-prediction by niallhaslam on 2008-04-02 11:23:35 as
	Intrinsically disordered protein from a pathogenic mesophile Mycobacterium tuberculosis adopts structured conformation at high temperature. [My Copy] Proteins (14 November 2007) by Niti Kumar, Swati Shukla, Sanjiv Kumar, et al.Anju Suryawanshi, Uma Chaudhry, Srinivasan Ramachandran, Souvik Maiti posted to disorder structure-prediction by niallhaslam on 2007-11-26 09:52:29 as along with 1 person sanjiv856
	The modular organization of domain structures: insights into protein-protein binding [My Copy] PLoS Computational Biology, Vol. preprint, No. 2007. (1 October 2007), e239.eor. by Del, Pablo Carbonell posted to domains modular-architecture protein protein-protein structure-prediction by niallhaslam on 2007-11-15 12:50:59 as
	Antibody-protein interactions: benchmark datasets and prediction tools evaluation. [My Copy] BMC structural biology, Vol. 7 (02 October 2007), 64. by J. V. Ponomarenko, P. E. Bourne posted to antibody benchmarking epitope-selection protein-protein structure-prediction by niallhaslam on 2007-11-06 10:05:19 as along with 1 person guhjy
	Predicting intrinsic disorder from amino acid sequence. [My Copy] Proteins, Vol. 53 Suppl 6 (2003), pp. 566-572. by Z. Obradovic, K. Peng, S. Vucetic, P. Radivojac, C. J. Brown, A. K. Dunker posted to disorder structure-prediction by niallhaslam on 2007-09-24 11:17:33 as along with 1 person carlosjavierna
	Intrinsic disorder and protein function. [My Copy] Biochemistry, Vol. 41, No. 21. (28 May 2002), pp. 6573-6582. by A. K. Dunker, C. J. Brown, J. D. Lawson, L. M. Iakoucheva, Z. Obradović posted to disorder protein structure-prediction by niallhaslam on 2007-09-24 11:10:25 as along with 4 people carlosjavierna pansapiens allmensch Evangelia
	Inferring function using patterns of native disorder in proteins. [My Copy] PLoS Comput Biol, Vol. 3, No. 8. (24 August 2007) by A. Lobley, M. B. Swindells, C. A. Orengo, D. T. Jones posted to disorder linear-motif protein structure-prediction by niallhaslam on 2007-09-24 10:41:21 as
	Natively unstructured regions in proteins identified from contact predictions. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 18. (15 September 2007), pp. 2376-2384. by Avner Schlessinger, Marco Punta, Burkhard Rost posted to disorder structure-prediction by niallhaslam on 2007-09-18 10:15:49 as along with 1 person tcschen
	Assessment of disorder predictions in CASP7 [My Copy] Proteins by Bordoli Lorenza, Kiefer Florian, Schwede Torsten posted to casp disorder structure-prediction by niallhaslam on 2007-08-27 09:53:40 as

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evolution	71
cooperation	55
microarray	34
resequencing	31
disorder	29
protein-protein	27
structure-prediction	24
protein	23
das	22
antibody	21
oligonucleotide	20
webservices	18
sequencing	18
epitope-selection	16
design	16
antibodies	14
motif	14
proteomics	14
complexity	14
epitope	12
affinity-proteomics	11
linear-motif	11
phosphorylation	11
prediction	10
elm	10
modular-architecture	10
affinity	10
signal-intensity	10
domains	9
annotation	9
antibody-array	9
glebs	9
protein-design	9
conservation	8
epitopes	7
sequence-alignment	7
primer-design	7
phospho-epitope	7
database	7
ontology	7
antigen-prediction	7
peptide	7
uniprot	6
thermodynamics	6
complex-systems	6
antimicrobial	6
protein-network	6
reassembly	6
structure	6
protein-interaction	6
poss-journal-club	6
interactions	6
assembly	5
bacterial-sociality	5
network	5
reassesmbly	5
short-read	5
alignment	5
protein-array	5
immunoinformatics	5
phophorylation	4
evolutionary_biology	4
probe-design	4
temperature	4
melting	4
hybridisation	4
ski-club	4
antigenicity	4
affymetrix	4
peptide-binding	4
embl_mol_evol_club	4
probe-selection	4
protein_structure	3
benchmarking	3
integrin	3
transmembrane	3
microarrays	3
ajax	3
thermal-equivalence	3
ptm	3
proteomebinders	3
peptides	3
platelet	3
resistance	3
tools	3
uhlen	3
sequence	3
cooperative_systems	3
dna	3
distributed-computing	3
monoclonal	2
epitope-space	2
universal	2
binder	2
partially-structured	2
clevershit	2
next-gen	2
post-translational-modification	2
protein_sequence	2
b_cell	2
function	2
pyrosequencing	2
bioactive-peptides	2
production	2
cooperators	2
protein_regions	2
repeat-structure	2
cross-identifier	2
ensembl	2
autonomy	2
homology	2
protein_interaction	2
blast	2
antigen	2
antibodypedia	2
psi-par	2
review	2
dna-melting	2
illumina	2
cooperative_activities	2
bioinformatics	2
epitope_prediction	2
ontology-search	2
open_access	2
exchange-format	2
cross-reference	2
genome-browser	2
immunogenicity	2
genotyping	2
cloud	2
coevolution	2
drug-target	2
development	2
self-organisation	2
game_theory	1
initial_adhesion	1
biological_organization	1
af	1
language	1
protein_complexes	1
ontology_tool	1
gene_ontology_consortium	1
roc-curves	1
protein_sequences	1
population_density	1
evolutionary_conservation	1
plasma_membrane_proteins	1
protein_database_search	1
matrix	1
gapped_alignments	1
population_demography	1
clonal	1
acetylation	1
peptide_motifs	1
swissprot	1
insulin-receptor-substrate	1
ligand-binding	1
iedb	1
split	1
affinty	1
breeding	1
oligonuceleotide	1
sequence-analysis	1
tandem_affinity_purification	1
surface_residue	1
mutation_rates	1
bacteria	1
grammar	1
antibody_protein	1
iterated_blast	1
prest	1
reverse-docking	1
biojava	1
cell_epitopes	1
biosapiens	1
autoimmunity	1
signaling	1
pfam	1
social-dynamics	1
amino-acid	1
transmembrane_regions	1
population_densities	1
prediction_tools	1
masking	1
generator	1
embrace	1
netacet	1
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heirarchy	1
netnes	1
membrane_protein_structure	1
phylogeny	1
registry	1
ebi	1
protein_level	1
virus_protein	1
taverna	1
virus_proteins	1
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mapping	1
plasma_membranes	1
residue_type	1
phobius	1
evolutionary_dynamics	1
substitution	1
hci	1
biophysics	1
membrane_protein_complexes	1
sequence_motifs	1
hupo	1
neutral_evolution	1
emboss	1
beetles	1
pdb	1
antagonistic_relationship	1
computational_tool	1
consensus	1
physicochemical-properties	1
density_dependence	1
social_evolution	1
sequence-search	1
blast_program	1
glycosolation	1
sexual_selection_theory	1
repeats	1
opinion	1
interaction_network	1
proein-binder	1
human_cooperation	1
article_level	1
dssp	1
iup	1
cheats	1
protein-binder	1
natural_selection	1
cloud-computing	1
cell_interactions	1
relative_fitness	1
web_server	1
solvent_accessibility	1
multicellularity	1
pcr	1
intrinsically_unstructured	1
ui	1
modelling	1
host_proteins	1
compiler	1
binding_motifs	1
gene_ontology	1
cooperative_games	1
structure_function	1
level_metrics	1
library-management	1
integral_membrane_proteins	1
kinase	1
sequence_similarities	1
thrombosis	1
next_generation	1
promoter-regions	1
functional_studies	1
quantification	1
irs	1
sex-evolution	1
conformational_variability	1
human_proteins	1
behaviour	1
smart	1
amp	1
casp	1
science	1
group_selection	1
genomics	1
software	1
protein_protein_interactions	1
censor	1
social	1
dynamics	1
horizontal-gene-transfer	1
signalp	1
molecular-biology	1
metagenomics	1
msa	1
similarity	1
mass_spectrometric_data	1
social-hierarchy	1
base-calling	1
markov-model	1

niallhaslam's structure-prediction [24 articles] Export Sort

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