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p2	56
binding	47
protein	42
algorithm	35
protein-ligand	32
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site	28
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bibtex-import	22
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alignment	10
comparison	10
residue-conservation	9
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pdb	9
binding-site-analysis	9
similarity	8
flexibility	8
moad	8
aa-propensity	8
bs-similarity	7
wrmsd	7
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props	5
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software	4
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function	4
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amino-acids	4
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network	4
oct09	3
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evolution	3
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affinity	3
graph-theory	3
cadd	3
enzyme	3
molecular_dynamics	3
sequence	3
lead_discovery	3
small	3
printed	3
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clique	2
similarity-network	2
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moe	2
insulin	2
concavity	2
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dd	2
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