nklee's Eisen:MB [4 articles] Export

Recent papers posted to nklee's library by the author Eisen:MB. You can also see everyone's Eisen:MB.

	Benchmarking tools for the alignment of functional noncoding DNA. [My Copy] BMC Bioinformatics, Vol. 5 (21 January 2004) by D. A. Pollard, C. M. Bergman, J. Stoye, S. E. Celniker, M. B. Eisen posted to benchmarking by nklee on 2008-08-15 03:39:15 as along with 6 people and 1 group cap1 indigoviolet lilou adijr idonaldson gjuggler EisenLab
	Position specific variation in the rate of evolution in transcription factor binding sites. [My Copy] BMC Evol Biol, Vol. 3, No. 1. (28 August 2003) by A. M. Moses, D. Y. Chiang, M. Kellis, E. S. Lander, M. B. Eisen posted to evolution by nklee on 2008-03-14 00:53:39 as along with 6 people and 2 groups briann dpollard adepace lusk cisevol emptyhb EisenLab cis-regulatory-evolution
	Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. [My Copy] Nature, Vol. 450, No. 7167. (8 November 2007), pp. 219-232. by A. Stark, M. F. Lin, P. Kheradpour, et al.J. S. Pedersen, L. Parts, J. W. Carlson, M. A. Crosby, M. D. Rasmussen, S. Roy, A. N. Deoras, J. G. Ruby, J. Brennecke, , , E. Hodges, A. S. Hinrichs, A. Caspi, B. Paten, S. W. Park, M. V. Han, M. L. Maeder, B. J. Polansky, B. E. Robson, S. Aerts, J. van Helden, B. Hassan, D. G. Gilbert, D. A. Eastman, M. Rice, M. Weir, M. W. Hahn, Y. Park, C. N. Dewey, L. Pachter, W. J. Kent, D. Haussler, E. C. Lai, D. P. Bartel, G. J. Hannon, T. C. Kaufman, M. B. Eisen, A. G. Clark, D. Smith, S. E. Celniker, W. M. Gelbart, M. Kellis posted to comparative genome by nklee on 2007-11-07 20:55:20 as along with 21 people and 3 groups heliopais anphony kieran101 Neeperando pradiptaray rouault druvus operon tmmurali djkt timflutre stajich lp2 cabbagezs hpaces roys caseybrown gjuggler shuzhens PetrovLab cisevol microRNA Mycology Drosophila-Genetics-Genomics-2008
	Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura. [My Copy] Genome Biol, Vol. 5, No. 9. (2004) by B. P. Berman, B. D. Pfeiffer, T. R. Laverty, et al.S. L. Salzberg, G. M. Rubin, M. B. Eisen, S. E. Celniker posted to enhancers by nklee on 2007-09-30 23:50:43 as along with 9 people and 3 groups emptyhb cajunsushi mbeisen indigoviolet adepace Stew cisevol maximilianh Auger EisenLab cis-regulatory-evolution Dead 60's

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comparative	30
clustering	29
motif	25
genomic	17
algorithm	16
yeast	14
genome	14
neural	13
network	13
discovery	13
review	12
survey	11
genetic	11
statistics	10
dependency	10
conservation	7
detection	7
footprinting	7
information	7
chip	7
analysis	7
mixture	6
scale	6
position	6
alignment	6
large	5
hierarchical	5
similarity	5
entropy	5
model	5
multiple	4
mutual	4
binding	4
self	4
database	4
organizing	4
map	4
protein	4
nucleosome	4
statistical	4
dataset	3
sequence	3
evaluation	3
evolutionary	3
tools	3
prediction	3
maximum	3
computing	3
gibbs	3
statistic	3
promoter	3
drosophila	3
regulatory	3
matrix	3
significance	3
human	3
function	3
feature	3
likelihood	3
p-value	2
motifs	2
background	2
soft	2
theory	2
benchmarking	2
recognition	2
sites	2
tool	2
dna	2
cluster	2
melanogaster	2
roc	2
som	2
weight	2
genomics	2
wide	2
evolution	2
elements	2
unsupervised	2
energy	2
number	2
kmer	2
selection	2
composite	2
learning	2
profile	2
arabidopsis	2
of	2
cis-regulatory	2
familial	2
scoring	2
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multistep	1
functional	1
nucleotide	1
interaction	1
anchored	1
structural	1
stability	1
enhancers	1
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thaliana	1
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up	1
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kononen	1
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phylogenetic	1
content	1
transition	1
jaspar	1
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distribution	1
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ecoli	1
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xxx	1
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eukaryotic	1
comprative	1
kd-tree	1
encoding	1
yeasts	1
cross-species	1
graph	1
initialization	1
kmeans	1
overrepresentation	1
divergence	1
prokaryotic	1
module	1
local	1
plant	1
filtering	1
site	1
coding	1
chip-chip	1
markov	1
length	1
web	1
phylogeny	1
bioperl	1
mechanics	1
dependencies	1
hierachical	1
metric	1
gap	1
transversion	1
dropsophila	1
neutral	1
dsom	1
benchmark	1
cis	1
cycle	1
progressive	1
heirarchical	1
new	1

nklee's Eisen:MB [4 articles] Export

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