nklee's analysis [7 articles] Export

Recent papers added to nklee's library classified by the tag analysis. You can also see everyone's analysis.

	Genome wide identification of regulatory motifs in Bacillus subtilis. [My Copy] BMC bioinformatics, Vol. 4 (16 May 2003) by M. M. Mwangi, E. D. Siggia posted to analysis genome large scale wide by nklee on 2008-12-05 05:26:02 as
	Genome-wide analysis of mammalian promoter architecture and evolution. [My Copy] Nature genetics, Vol. 38, No. 6. (28 June 2006), pp. 626-635. by Piero Carninci, Albin Sandelin, Boris Lenhard, et al.Shintaro Katayama, Kazuro Shimokawa, Jasmina Ponjavic, Colin A. Semple, Martin S. Taylor, Pär G. Engström, Martin C. Frith, Alistair R. Forrest, Wynand B. Alkema, Sin Lam L. Tan, Charles Plessy, Rimantas Kodzius, Timothy Ravasi, Takeya Kasukawa, Shiro Fukuda, Mutsumi Kanamori-Katayama, Yayoi Kitazume, Hideya Kawaji, Chikatoshi Kai, Mari Nakamura, Hideaki Konno, Kenji Nakano, Salim Mottagui-Tabar, Peter Arner, Alessandra Chesi, Stefano Gustincich, Francesca Persichetti, Harukazu Suzuki, Sean M. Grimmond, Christine A. Wells, Valerio Orlando, Claes Wahlestedt, Edison T. Liu, Matthias Harbers, Jun Kawai, Vladimir B. Bajic, David A. Hume, Yoshihide Hayashizaki posted to analysis genome wide by nklee on 2008-12-02 06:30:11 as along with 19 people and 4 groups rsaito guhjy antonkratz athma inesdesantiago rpatward hagechouchin443 djkt jfr xwbcn dchughes tabu samal nickluscombe xiaobeizhao cisevol eviledv gjuggler jasonflannick G4ID EBI-regulation Genetics-of-Gambling cis-regulatory-evolution
	ROC analysis: applications to the classification of biological sequences and 3D structures [My Copy] Brief Bioinform (11 January 2008), bbm064. by Paolo Sonego, Andras Kocsor, Sandor Pongor posted to analysis roc by nklee on 2008-06-16 06:27:01 as along with 4 people svozil cjeans neils spsdigest
	A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors. [My Copy] Nucleic Acids Res, Vol. 34, No. 21. (2006) by H. Ji, S. A. Vokes, W. H. Wong posted to analysis comparative by nklee on 2008-04-16 08:20:37 as along with 1 person jtomasch
	Incorporating background frequency improves entropy-based residue conservation measures [My Copy] BMC Bioinformatics, Vol. 7 (17 August 2006), 385. by Kai Wang, Ram Samudrala posted to analysis conservation entropy by nklee on 2008-02-13 06:01:31 as along with 2 people marti bicko
	Soft computing for feature analysis [My Copy] pp. 201-221. by N. R. Pal posted to analysis computing feature soft by nklee on 2007-12-19 21:23:57 as
	Analysis of computational approaches for motif discovery [My Copy] Algorithms for Molecular Biology, Vol. 1, No. 1. (19 May 2006), 8. by Nan Li, Martin Tompa posted to analysis discovery motif tools by nklee on 2007-09-19 07:03:30 as along with 11 people and 2 groups wowalz yevishere ana barry tuck chad_davis dquest lusk maximilianh xi03 csdhwang structural_bioinformatics Bioinformatics

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comparative	30
clustering	29
motif	25
genomic	17
algorithm	15
genome	14
yeast	14
discovery	13
network	13
neural	13
review	11
survey	11
dependency	10
genetic	10
statistics	10
analysis	7
chip	7
conservation	7
detection	7
footprinting	7
information	7
alignment	6
mixture	6
position	6
scale	6
entropy	5
hierarchical	5
large	5
model	5
similarity	5
binding	4
database	4
map	4
multiple	4
mutual	4
nucleosome	4
organizing	4
protein	4
self	4
statistical	4
computing	3
dataset	3
drosophila	3
evaluation	3
evolutionary	3
feature	3
function	3
gibbs	3
human	3
likelihood	3
matrix	3
maximum	3
prediction	3
promoter	3
regulatory	3
sequence	3
significance	3
statistic	3
tools	3
arabidopsis	2
background	2
benchmarking	2
cis-regulatory	2
cluster	2
composite	2
dna	2
elements	2
energy	2
evolution	2
familial	2
genomics	2
kmer	2
learning	2
melanogaster	2
motifs	2
number	2
of	2
profile	2
p-value	2
recognition	2
roc	2
scoring	2
selection	2
sites	2
soft	2
som	2
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wide	2
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cell	1
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cis	1
coding	1
combinatorial	1
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cross-species	1
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dropsophila	1
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ecoli	1
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substitution	1
thaliana	1
theoretical	1
threshold	1
transition	1
transversion	1
two	1
unknown	1
up	1
web	1
xxx	1
yeasts	1

nklee's analysis [7 articles] Export

nklee's tags