nklee's footprinting [7 articles] Export

Recent papers added to nklee's library classified by the tag footprinting. You can also see everyone's footprinting.

	Algorithms for phylogenetic footprinting. [My Copy] J Comput Biol, Vol. 9, No. 2. (2002), pp. 211-223. by M. Blanchette, B. Schwikowski, M. Tompa posted to comparative footprinting genomic by nklee on 2008-09-30 04:43:53 as along with 2 people chad_davis dquest
	Multi-species sequence comparison: the next frontier in genome annotation [My Copy] Genome Biology, Vol. 4, No. 12. (2003) by Inna Dubchak, Kelly Frazer posted to footprinting by nklee on 2008-02-19 23:06:17 as
	A novel approach to identifying regulatory motifs in distantly related genomes [My Copy] Genome Biology, Vol. 6, No. 13. (2005) by Ruth Van Hellemont, Pieter Monsieurs, Gert Thijs, Bart De Moor, Yves Van de Peer, Kathleen Marchal posted to clustering comparative footprinting genomic by nklee on 2008-01-31 04:19:31 as along with 1 person wowalz
	A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome. [My Copy] J Mol Biol, Vol. 284, No. 2. (27 November 1998), pp. 241-254. by K. Robison, A. M. McGuire, G. M. Church posted to comparative ecoli footprinting genomic by nklee on 2008-01-02 23:09:01 as along with 2 people medic0747 kaarsinogen
	Prediction of synergistic transcription factors by function conservation [My Copy] Genome Biology, Vol. 8, No. 12. (2007) by Zihua Hu, Boyu Hu, James Collins posted to footprinting by nklee on 2007-12-19 21:16:32 as along with 3 people and 1 group cjeans maximilianh ale cis-regulatory-evolution
	PhyloScan: Identification of transcription factor binding sites using cross-species evidence [My Copy] Algorithms for Molecular Biology, Vol. 2 (23 January 2007), 1. by Steven C. Carmack, Lee A. Mccue, Lee A. Newberg, Charles E. Lawrence posted to footprinting by nklee on 2007-11-27 06:16:56 as along with 3 people and 1 group dpollard dquest lusk EisenLab
	Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis. [My Copy] Genome Res, Vol. 11, No. 7. (July 2001), pp. 1175-1186. by P. F. Cliften, L. W. Hillier, L. Fulton, et al.T. Graves, T. Miner, W. R. Gish, R. H. Waterston, M. Johnston posted to footprinting yeast by nklee on 2007-10-29 05:16:18 as along with 2 people evaf kaarsinogen

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comparative	30
clustering	29
motif	25
genomic	17
algorithm	15
genome	14
yeast	14
discovery	13
network	13
neural	13
review	12
survey	11
dependency	10
genetic	10
statistics	10
analysis	7
chip	7
conservation	7
detection	7
footprinting	7
information	7
alignment	6
mixture	6
position	6
scale	6
entropy	5
hierarchical	5
large	5
model	5
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multiple	4
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protein	4
self	4
statistical	4
computing	3
dataset	3
drosophila	3
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function	3
gibbs	3
human	3
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matrix	3
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promoter	3
regulatory	3
sequence	3
significance	3
statistic	3
tools	3
arabidopsis	2
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benchmarking	2
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cluster	2
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dna	2
elements	2
energy	2
evolution	2
familial	2
genomics	2
kmer	2
learning	2
melanogaster	2
motifs	2
number	2
of	2
profile	2
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roc	2
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theoretical	1
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transition	1
transversion	1
two	1
unknown	1
up	1
web	1
xxx	1
yeasts	1

nklee's footprinting [7 articles] Export

nklee's tags