nklee's genomic [17 articles] Export

Recent papers added to nklee's library classified by the tag genomic. You can also see everyone's genomic.

	Algorithms for phylogenetic footprinting. [My Copy] J Comput Biol, Vol. 9, No. 2. (2002), pp. 211-223. by M. Blanchette, B. Schwikowski, M. Tompa posted to comparative footprinting genomic by nklee on 2008-09-30 04:43:53 as along with 2 people chad_davis dquest
	Probabilistic clustering of sequences: Inferring new bacterial regulons by comparative genomics [My Copy] PNAS, Vol. 99, No. 11. (2002), pp. 7323-7328. by Erik van Nimwegen†, Mihaela Zavolan, Nikolaus Rajewsky, Eric D. Siggia posted to clustering comparative genomic by nklee on 2008-07-16 01:20:21 as
	Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach. [My Copy] Genome Biol, Vol. 6, No. 2. (2005) by O. Elemento, S. Tavazoie posted to comprative genomic by nklee on 2008-05-09 01:08:22 as along with 4 people and 1 group Dulce leelarcombe indigoviolet grahamc EisenLab
	Qualifying the relationship between sequence conservation and molecular function [My Copy] Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 201-205. by Gregory M. Cooper, Christopher D. Brown posted to comparative conservation genomic by nklee on 2008-04-28 03:31:33 as along with 7 people farhat emptyhb aprasad brant djkt xingxu bpcusack
	A novel approach to identifying regulatory motifs in distantly related genomes [My Copy] Genome Biology, Vol. 6, No. 13. (2005) by Ruth Van Hellemont, Pieter Monsieurs, Gert Thijs, Bart De Moor, Yves Van de Peer, Kathleen Marchal posted to clustering comparative footprinting genomic by nklee on 2008-01-31 04:19:31 as along with 1 person wowalz
	Prediction of transcription factor binding sites using ChIP-chip and phylogenetic footprinting data [My Copy] Journal of Bioinformatics and Computational Biology, Vol. 5, No. 1. (February 2007), pp. 105-116. by Markus T. Friberg posted to chip comparative genomic by nklee on 2008-01-28 03:29:10 as
	Large-scale Cis-element Detection by Analysis of Correlated Expression and Sequence Conservation between Arabidopsis and Brassica oleracea. [My Copy] Plant Physiol (6 October 2006) by Georg Haberer, Michael T T. Mader, Peter Kosarev, Manuel Spannagl, Li Yang, Klaus Fx F. Mayer posted to comparative genomic plant by nklee on 2008-01-10 02:36:09 as along with 4 people and 1 group dpollard xwbcn kengg xili03 EisenLab
	A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome. [My Copy] J Mol Biol, Vol. 284, No. 2. (27 November 1998), pp. 241-254. by K. Robison, A. M. McGuire, G. M. Church posted to comparative ecoli footprinting genomic by nklee on 2008-01-02 23:09:01 as along with 2 people medic0747 kaarsinogen
	Transcriptional Regulatory Networks in Saccharomyces cerevisiae [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804. by Tong I. Lee, Nicola J. Rinaldi, Francois Robert, et al.Duncan T. Odom, Ziv Bar-Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher T. Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean-Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young posted to genomic yeast by nklee on 2008-01-01 23:51:40 as along with 31 people and 2 groups mjoach kmdaily kinop junehlee lillo80 camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest siebert dbk-lab TNT
	Eukaryotic Regulatory Element Conservation Analysis and Identification Using Comparative Genomics [My Copy] Genome Res., Vol. 14, No. 3. (1 March 2004), pp. 451-458. by Yueyi Liu, Shirley X. Liu, Liping Wei, Russ B. Altman, Serafim Batzoglou posted to comparative genomic yeast by nklee on 2008-01-01 23:45:44 as along with 4 people and 1 group cisevol lyongu gpalidwor dquest cis-regulatory-evolution
	Transcriptional regulatory code of a eukaryotic genome [My Copy] Nature, Vol. 431, No. 7004. (2004), pp. 99-104. by Christopher T. Harbison, Benjamin D. Gordon, Tong I. Lee, et al.Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford, Nancy M. Hannett, Jean-Bosco Tagne, David B. Reynolds, Jane Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry K. Pokholok, Manolis Kellis, Alex P. Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young posted to comparative genomic yeast by nklee on 2008-01-01 23:42:51 as along with 28 people and 8 groups daveGerrard Dulce talponer wowalz siebert alokm tuck lyongu kaspermunch dpollard balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim koller lusk cisevol njcitulike xili03 brant mariakmejia kristallreiner snow_dragon aalibes Bioinformatics EisenLab FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling BergmanLab
	Computation and Analysis of Genomic Multi-Sequence Alignments [My Copy] Annual Review of Genomics and Human Genetics, Vol. 8, No. 1. (9 May 2007), pp. 193-213. by Mathieu Blanchette posted to alignment comparative genomic multiple sequence by nklee on 2008-01-01 23:32:50 as along with 7 people and 1 group natstreet druvus treangen dpollard lilou maximilianh aprasad EisenLab
	Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays [My Copy] Nature Genetics, Vol. 36, No. 12. (14 November 2004), 1331. by Sonali Mukherjee, Michael F. Berger, Ghil Jona, et al.Xun S. Wang, Dale Muzzey, Michael Snyder, Richard A. Young, Martha L. Bulyk posted to cell comparative cycle genomic yeast by nklee on 2008-01-01 05:28:00 as along with 5 people johncumbers olympos emptyhb yevishere kristallreiner
	Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions [My Copy] Genome Res., Vol. 17, No. 11. (1 November 2007), pp. 1603-1613. by Laurie Gordon, Shan Yang, Mary Tran-Gyamfi, et al.Dan Baggott, Mari Christensen, Aaron Hamilton, Richard Crooijmans, Martien Groenen, Susan Lucas, Ivan Ovcharenko, Lisa Stubbs posted to comparative genomic by nklee on 2008-01-01 01:10:57 as along with 1 person maximilianh
	28-Way vertebrate alignment and conservation track in the UCSC Genome Browser [My Copy] Genome Res. (5 November 2007), gr.6761107. by Webb Miller, Kate Rosenbloom, Ross C. Hardison, et al.Minmei Hou, James Taylor, Brian Raney, Richard Burhans, David C. King, Robert Baertsch, Daniel Blankenberg, Kosakovsky, Anton Nekrutenko, Belinda Giardine, Robert S. Harris, Svitlana Tyekucheva, Mark Diekhans, Thomas H. Pringle, William J. Murphy, Arthur Lesk, George M. Weinstock, Kerstin Lindblad-Toh, Richard A. Gibbs, Eric S. Lander, Adam Siepel, David Haussler, James W. Kent posted to comparative genomic by nklee on 2008-01-01 01:09:30 as along with 11 people rschulz aprasad dchughes maximilianh idonaldson fpattyn gjuggler clearbluespring joavah AaronDarling guhjy
	Comparative genomics. [My Copy] PLoS biology, Vol. 1, No. 2. (17 November 2003), e58. by Ross C. Hardison posted to comparative genomic by nklee on 2007-11-04 23:33:35 as along with 7 people and 1 group rshe roys katholt aprasad axelon beatrizfernandez Neeperando Microbial-Ecology
	Comparative Genomic [My Copy] Annu. Rev. Genomics Hum. Genet, Vol. 5 (2004), pp. 15-56. by Webb Miller, Kateryna D. Makova, Anton Nekrutenko, Ross C. Hardison posted to comparative genomic by nklee on 2007-09-26 09:24:02 as

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comparative	30
clustering	29
motif	25
genomic	17
algorithm	15
genome	14
yeast	14
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neural	13
review	11
survey	11
dependency	10
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chip	7
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position	6
scale	6
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protein	4
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drosophila	3
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sequence	3
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dna	2
elements	2
energy	2
evolution	2
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genomics	2
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nklee's genomic [17 articles] Export

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