okarsligil's motif [14 articles] Export

Recent papers added to okarsligil's library classified by the tag motif. You can also see everyone's motif.

	A linguistic model for the rational design of antimicrobial peptides [My Copy] Nature, Vol. 443, No. 7113., pp. 867-869. by Christopher Loose, Kyle Jensen, Isidore Rigoutsos, Gregory Stephanopoulos posted to antimicrobial motif peptide by okarsligil on 2006-10-19 14:10:06 as along with 10 people and 1 group marcio apostola niallhaslam Yanno dayjm mtagaya madhadron pjkiley shabib loison Bioinformatics
	How does DNA sequence motif discovery work? [My Copy] Nature Biotechnology, Vol. 24, No. 8., pp. 959-961. by Patrik D'Haeseleer posted to dna motif sequence by okarsligil on 2006-09-07 18:59:23 as along with 9 people and 1 group Dulce wowalz cambray bryankr Evangelia antonkratz xi03 idonaldson isimpson Bioinformatics
	Deciphering principles of transcription regulation in eukaryotic genomes [My Copy] Mol Syst Biol, Vol. 2, No. 1. (18 April 2006), pp. msb4100054-E1-msb4100054-E10. by Dat H. Nguyen, Patrik D'Haeseleer posted to eukaryote motif regulation by okarsligil on 2006-04-25 16:38:51 as along with 6 people and 2 groups fenghezi pau koller reidy mikaelhuss isimpson Bioinformatics RNAtransport
	What are DNA sequence motifs? [My Copy] Nature Biotechnology, Vol. 24, No. 4., pp. 423-425. by Patrik D'Haeseleer posted to dna motif by okarsligil on 2006-04-11 21:11:27 as along with 4 people and 1 group bryankr rlhsiao ekoenig isimpson Bioinformatics
	Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues. [My Copy] J Mol Biol, Vol. 345, No. 5. (4 February 2005), pp. 1281-1294. by O. Keskin, B. Ma, R. Nussinov posted to motif protein structure by okarsligil on 2006-03-08 23:26:10 as along with 9 people and 2 groups marti mdimmic ana barry baaden bicko j3xucite bilab xz structural_bioinformatics Bioinformatics
	Minimotif Miner: a tool for investigating protein function [My Copy] Nature Methods, Vol. 3, No. 3. (17 February 2006), pp. 175-177. by Sudha Balla, Vishal Thapar, Snigdha Verma, et al.Thaibinh Luong, Tanaz Faghri, Chun-Hsi Huang, Sanguthevar Rajasekaran, Jacob, Jessica H. Shinn, William A. Mohler, Mark W. Maciejewski, Michael R. Gryk, Bryan Piccirillo, Stanley R. Schiller, Martin R. Schiller posted to function motif protein by okarsligil on 2006-03-08 20:46:03 as along with 2 people and 1 group j3xucite Evangelia Bioinformatics
	Systematic discovery of regulatory motifs in human promoters and 3[prime] UTRs by comparison of several mammals [My Copy] Nature, Vol. aop, No. current. (27 February 2005) by Xiaohui Xie, Jun Lu, E. J. Kulbokas, et al.Todd R. Golub, Vamsi Mootha, Kerstin Lindblad-Toh, Eric S. Lander, Manolis Kellis posted to motif promoter regulation by okarsligil on 2005-12-10 18:08:06 as along with 28 people and 4 groups Dulce wowalz maximilianh_otx hagechouchin443 sterovetta kieran101 snuppepuppan BioGeek briann jtextori tmmurali jfr balajis lyongu eckart_bindewald mtagaya adepace fisherp nickluscombe panetebrother smiddha franklin oscarluoinau heliopais ale emptyhb maralena mariakmejia Bioinformatics EisenLab microRNA EBI-regulation
	Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks. [My Copy] PLoS Biol, Vol. 3, No. 12. (15 November 2005) by Victor Neduva, Rune Linding, Isabelle Su-Angrand, et al.Alexander Stark, Federico de D. Masi, Toby J J. Gibson, Joe Lewis, Luis Serrano, Robert B B. Russell posted to motif network peptide protein by okarsligil on 2005-11-30 14:57:02 as along with 10 people and 1 group rklancer bicko Ayest xwbcn drastic ezotenko grahamc Evangelia oelemento chad_davis Bioinformatics
	Consensus motifs and peptide ligands of MHC class I molecules. [My Copy] Semin Immunol, Vol. 5, No. 2. (April 1993), pp. 81-94. by K. Falk, O. Rötzschke posted to motif peptide by okarsligil on 2005-11-30 14:49:49 as along with 1 person and 1 group zhlei Bioinformatics
	An extension and novel solution to the (l,d)-motif challenge problem. [My Copy] Genome Inform Ser Workshop Genome Inform, Vol. 15, No. 2. (2004), pp. 63-71. by M. P. Styczynski, K. L. Jensen, I. Rigoutsos, G. N. Stephanopoulos posted to motif by okarsligil on 2005-11-29 19:02:01 as along with 1 group Bioinformatics
	A generic motif discovery algorithm for sequential data. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 1. (1 January 2006), pp. 21-28. by K. L. Jensen, M. P. Styczynski, I. Rigoutsos, G. N. Stephanopoulos posted to algorithm motif sequential by okarsligil on 2005-11-29 19:00:41 as along with 1 person and 1 group dquest Bioinformatics
	Remote homology detection: a motif based approach. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by A. Ben-Hur, D. Brutlag posted to homology motif by okarsligil on 2005-11-29 18:57:29 as along with 2 people and 1 group ujh Cortel Bioinformatics
	Subtle motifs: defining the limits of motif finding algorithms. [My Copy] Bioinformatics, Vol. 18, No. 10. (October 2002), pp. 1382-1390. by U. Keich, P. A. Pevzner posted to algorithm motif by okarsligil on 2005-11-10 14:00:05 as along with 5 people and 1 group wowalz coldmeadow tmmurali dquest nedwards Bioinformatics
	Predicting protein-peptide interactions via a network-based motif sampler [My Copy] Bioinformatics, Vol. 20, No. (Supplement 1):., i274. by Reiss A. Schwikowski posted to motif network by okarsligil on 2005-11-06 06:22:23 as along with 1 group Bioinformatics

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protein	44
network	32
motif	14
prediction	13
gene	12
genome	11
interaction	11
peptide	11
structure	8
antimicrobial	7
clustering	7
expression	7
algorithm	6
bayesian	6
biology	6
regulation	6
yeast	6
dna	5
similarity	5
cerevisiae	4
folding	4
graph	4
metabolic	4
mpc	4
pathway	4
pattern	4
saccharomyces	4
systems	4
database	3
estimation	3
evolution	3
human	3
sequence	3
statistics	3
bacteria	2
conserved	2
denoising	2
discovery	2
fisher	2
function	2
genetics	2
integration	2
map	2
model	2
multiscale	2
nmr	2
parameter	2
promoter	2
svm	2
trading	2
transcription	2
tutorial	2
activity	1
antibiotics	1
boolean	1
chemical	1
comparative	1
complex	1
complexity	1
connectivity	1
constrained	1
copies	1
data	1
design	1
dynamic	1
environment	1
enzyme	1
eukaryote	1
explicit	1
flux	1
fractal	1
gaussian	1
genotype	1
greedy	1
h-inifinity	1
homology	1
inference	1
information	1
information-theory	1
interactome	1
irreducibility	1
language	1
likelihood	1
limitations	1
markov	1
mass	1
maximum	1
membrane	1
metabolism	1
microarray	1
min-max	1
mode	1
modeling	1
ms	1
nanoscale	1
nodes	1
noise	1
nonlinear	1
nutrient	1
orthagonal	1
perturbed	1
phenome	1
phenotype	1
politics	1
potential	1
predictability	1
predictive	1
proteomics	1
random	1
rd	1
recognition	1
regulatory	1
review	1
robustness	1
salmonella	1
search	1
sequential	1
series	1
signal	1
signaling	1
signatures	1
spectra	1
spectrometry	1
stability	1
stochastic	1
strategy	1
structural	1
systems-biology	1
teiresias	1
time	1
timeseries	1
two-hybrid	1
vertex	1

okarsligil's motif [14 articles] Export

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