olberd's maldi [45 articles] Export

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	Serum Peptide Profiling by Magnetic Particle-Assisted, Automated Sample Processing and MALDI-TOF Mass Spectrometry [My Copy] Analytical Chemistry, Vol. 76, No. 6. (1 March 2004), pp. 1560-1570. by Josep Villanueva, John Philip, David Entenberg, et al.Carlos A. Chaparro, Meena K. Tanwar, Eric C. Holland, Paul Tempst posted to serum maldi by olberd on 2009-11-05 14:22:18 as along with 1 person nedwards
	BioSunMS: a plug-in-based software for the management of patients information and the analysis of peptide profiles from mass spectrometry [My Copy] BMC Medical Informatics and Decision Making, Vol. 9, No. 1. (17 February 2009), 13. by Yuan Cao, Na Wang, Xiaomin Ying, et al.Ailing Li, Hengsha Wang, Xuemin Zhang, Wuju Li posted to software proteomics processing maldi by olberd on 2009-11-05 13:22:46 as along with 1 person dmsok
	Detecting and aligning peaks in mass spectrometry data with applications to MALDI [My Copy] Computational Biology and Chemistry, Vol. 30, No. 1. (February 2006), pp. 27-38. by W. Yu, B. Wu, N. Lin, K. Stone, K. Williams, H. Zhao posted to proteomics processing peak_detection maldi alignment by olberd on 2009-10-13 14:56:20 as along with 1 person nicholso
	Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching [My Copy] Bioinformatics, Vol. 22, No. 17. (1 September 2006), pp. 2059-2065. by Pan Du, Warren A. Kibbe, Simon M. Lin posted to proteomics processing nosoftware maldi by olberd on 2009-10-13 14:39:07 as along with 3 people Shibby awg2 mass
	MALDI-MS Data Analysis for Disease Biomarker Discovery [My Copy] New and Emerging Proteomic Techniques (2006), pp. 199-216. by Weichuan Yu, Baolin Wu, Junfeng Liu, et al.Xiaoye Li, Kathy Stone, Kenneth R. Williams, Hongyu Zhao posted to proteomics processing nosoftware normalization maldi cancer biomarker alignment by olberd on 2009-10-13 13:20:30 as
	Characterising phase variations in MALDI-TOF data and correcting them by peak alignment. [My Copy] Cancer informatics, Vol. 1 (2005), pp. 32-40. by Simon M. Lin, Richard P. Haney, Michael J. Campa, Michael C. Fitzgerald, Edward F. Patz posted to proteomics processing maldi alignment by olberd on 2009-10-13 12:09:53 as
	Sparsity and smoothness via the fused lasso [My Copy] Journal of the Royal Statistical Society Series B, Vol. 67, No. 1. (2005), pp. 91-108. by Robert Tibshirani, Michael Saunders, Saharon Rosset, Ji Zhu, Keith Knight posted to statistics proteomics maldi by olberd on 2009-08-14 10:15:08 as along with 1 person ajbattle
	New Developments in Profiling and Imaging of Proteins from Tissue Sections by MALDI Mass Spectrometry [My Copy] Journal of Proteome Research, Vol. 5, No. 11. (1 November 2006), pp. 2889-2900. by Pierre Chaurand, Jeremy L. Norris, D. Shannon Cornett, James A. Mobley, Richard M. Caprioli posted to maldi proteomics by olberd on 2009-07-16 09:53:57 as
	MONITORING THE SEROLOGICAL PROTEOME: THE LATEST MODALITY IN PROSTATE CANCER DETECTION [My Copy] The Journal of Urology, Vol. 172, No. 1. (July 2004), pp. 331-337. by J. Mobley, Y. Lam, K. Lau, et al.V. Pais, J. Lesperance, B. Steadman, L. Fuster, R. Blute, M. Taplin, S. Ho posted to maldi proteomics by olberd on 2009-07-16 09:50:37 as
	Beating the Noise: New Statistical Methods for Detecting Signals in MALDI-TOF Spectra Below Noise Level [My Copy] Computational Life Sciences II (2006), pp. 119-128. by Tim Conrad, Alexander Leichtle, Andre Hagehülsmann, et al.Elmar Diederichs, Sven Baumann, Joachim Thiery, Christof Schütte posted to maldi processing proteomics by olberd on 2009-07-16 09:43:06 as
	Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (06 January 2009), 4. by Chao Yang, Zengyou He, Weichuan Yu posted to forphd maldi processing proteomics by olberd on 2009-06-25 11:04:24 as along with 2 people nuin sjcockell
	Correcting Common Errors in Identifying Cancer-Specific Serum Peptide Signatures† [My Copy] Journal of Proteome Research, Vol. 4, No. 4. (1 August 2005), pp. 1060-1072. by Josep Villanueva, John Philip, Carlos A. Chaparro, et al.Yongbiao Li, Ricardo Toledo-Crow, Lin DeNoyer, Martin Fleisher, Richard J. Robbins, Paul Tempst posted to alignment biomarker cancer forphd maldi normalization processing proteomics by olberd on 2009-06-23 08:03:48 as along with 1 person nedwards
	Detection of colorectal cancer using MALDI-TOF serum protein profiling [My Copy] European Journal of Cancer, Vol. 42, No. 8. (May 2006), pp. 1068-1076. by M. Denoo, B. Mertens, A. Ozalp, et al.M. Bladergroen, M. Vanderwerff, C. Vandevelde, A. Deelder, R. Tollenaar posted to biomarker cancer maldi proteomics by olberd on 2009-02-26 10:05:26 as
	Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation [My Copy] Bioinformatics, Vol. 25, No. 5. (1 March 2009), pp. 643-649. by Theodore Alexandrov, Jens Decker, Bart Mertens, et al.Andre M. Deelder, Rob A. E. M. Tollenaar, Peter Maass, Herbert Thiele posted to biomarker cancer maldi proteomics serum wavelet by olberd on 2009-02-26 09:56:32 as along with 1 person nuin
	Processing MALDI Mass Spectra to Improve Mass Spectral Direct Tissue Analysis. [My Copy] International journal of mass spectrometry, Vol. 260, No. 2-3. (1 February 2007), pp. 212-221. by Jeremy L. Norris, Dale S. Cornett, James A. Mobley, et al.Malin Andersson, Erin H. Seeley, Pierre Chaurand, Richard M. Caprioli posted to processing normalization maldi alignment by olberd on 2008-12-10 08:44:22 as
	LIMPIC: a computational method for the separation of protein MALDI-TOF-MS signals from noise. [My Copy] BMC bioinformatics, Vol. 8 (26 March 2007), 101. by Dante Mantini, Francesca Petrucci, Damiana Pieragostino, et al.Piero Del Boccio, Marta Di Nicola, Carmine Di Ilio, Giorgio Federici, Paolo Sacchetta, Silvia Comani, Andrea Urbani posted to maldi normalization processing proteomics by olberd on 2008-12-10 08:43:30 as along with 3 people robert Gehrke BIBLIOma
	MALDI/SELDI Protein Profiling of Serum for the Identification of Cancer Biomarkers [My Copy] Clinical Proteomics (2008), pp. 125-140. by Lisa H. Cazares, Jose I. Diaz, Rick R. Drake, John O. Semmes posted to biomarker cancer maldi normalization seldi by olberd on 2008-12-10 08:42:42 as
	Optimization of MALDI-TOF MS detection for enhanced sensitivity of affinity-captured proteins spanning a 100 kDa mass range. [My Copy] Journal of proteome research, Vol. 6, No. 11. (November 2007), pp. 4517-4524. by C. L. Gatlin-Bunai, L. H. Cazares, W. E. Cooke, O. J. Semmes, D. I. Malyarenko posted to maldi normalization processing proteomics by olberd on 2008-12-10 08:42:00 as
	Analysis of Mass Spectrometry Data Using Bayesian Wavelet-Based Functional Mixed Models [My Copy] Bayesian Inference for Gene Expression and Proteomics (2006), pp. 269-288. by Jeffrey S. Morris, Philip J. Brown, Keith A. Baggerly, Kevin R. Coombes posted to cancer maldi proteomics seldi by olberd on 2008-10-27 13:55:12 as
	Understanding the characteristics of mass spectrometry data through the use of simulation [My Copy] Cancer Informatics (2005), pp. 41-52. by Kevin R. Coombes, John M. Koomen, Keith A. Baggerly, Jeffrey S. Morris, Ryuji Kobayashi posted to maldi proteomics seldi by olberd on 2008-10-27 13:46:44 as
	Bayesian Analysis of Mass Spectrometry Proteomic Data Using Wavelet-Based Functional Mixed Models [My Copy] Biometrics, Vol. 64, No. 2. (June 2008), pp. 479-489. by Morris, S. Jeffrey, Brown, et al.J. Philip, Herrick, C. Richard, Baggerly, A. Keith, Coombes, R. Kevin posted to cancer maldi proteomics by olberd on 2008-10-27 13:35:46 as along with 1 person guhjy
	Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1636-1643. by Baolin Wu, Tom Abbott, David Fishman, et al.Walter McMurray, Gil Mor, Kathryn Stone, David Ward, Kenneth Williams, Hongyu Zhao posted to cancer forphd maldi proteomics serum by olberd on 2008-10-27 09:39:43 as along with 2 people ujh lp2
	Standardization and denoising algorithms for mass spectra to classify whole-organism bacterial specimens [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3128-3136. by Glen A. Satten, Somnath Datta, Hercules Moura, et al.Adrian R. Woolfitt, Maria Carvalho, George M. Carlone, Barun K. De, Antonis Pavlopoulos, John R. Barr posted to maldi proteomics by olberd on 2008-10-27 09:21:45 as
	Peak Intensity Prediction in MALDI-TOF Mass Spectrometry: A Machine Learning Study to support Quantitative Proteomics [My Copy] BMC Bioinformatics, Vol. 9 (20 October 2008), 443. by Wiebke A. Timm, Alexandra Scherbart, Sebastian Bocker, Oliver Kohlbacher, Tim W. Nattkemper posted to maldi proteomics by olberd on 2008-10-23 12:11:16 as along with 2 people nuin frohike
	PrepMS: TOF MS data graphical preprocessing tool. [My Copy] Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. 264-265. by Y. V. Karpievitch, E. G. Hill, A. J. Smolka, et al.J. S. Morris, K. R. Coombes, K. A. Baggerly, J. S. Almeida posted to forphd maldi proteomics software by olberd on 2008-10-23 11:21:21 as along with 1 person guhjy
	A cross-validation study to select a classification procedure for clinical diagnosis based on proteomic mass spectrometry. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7, No. 2. (2008) by Dirk Valkenborg, Suzy Van Sanden, Dan Lin, et al.Adetayo Kasim, Qi Zhu, Philippe Haldermans, Ivy Jansen, Ziv Shkedy, Tomasz Burzykowski posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:10:28 as along with 1 person frohike
	Support vector machine approach to separate control and breast cancer serum samples. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by T. V. Pham, M. A. van de Wiel, C. R. Jimenez posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:09:50 as
	Empirical Bayes logistic regression. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by F. Strimenopoulou, P. J. Brown posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:09:14 as
	Case-control breast cancer study of MALDI-TOF proteomic mass spectrometry data on serum samples. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by M. P. van der Werff, B. Mertens, M. E. de Noo, et al.M. R. Bladergroen, H. C. Dalebout, R. A. Tollenaar, A. M. Deelder posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:08:02 as
	Organizing a competition on clinical mass spectrometry based proteomic diagnosis. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by B. Mertens posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:07:03 as
	A classification model for the Leiden proteomics competition. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by H. C. Hoefsloot, S. Smit, A. K. Smilde posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:05:34 as
	Developing a discrimination rule between breast cancer patients and controls using proteomics mass spectrometric data: a three-step approach. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by A. G. Heidema, N. Nagelkerke posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:05:08 as
	Application of the random forest classification method to peaks detected from mass spectrometric proteomic profiles of cancer patients and controls. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by J. H. Barrett, D. A. Cairns posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:04:19 as
	Classification of breast cancer versus normal samples from mass spectrometry profiles using linear discriminant analysis of important features selected by random forest. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by S. Datta posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 11:03:08 as
	Clinical mass spectrometry proteomic diagnosis by conformal predictors. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7, No. 2. (2008) by A. Gammerman, I. Nouretdinov, B. Burford, A. Chervonenkis, V. Vovk, Z. Luo posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 10:03:43 as
	Principal component discriminant analysis. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by T. Fearn posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 10:02:46 as
	Autocorrelated logistic ridge regression for prediction based on proteomics spectra. [My Copy] Statistical applications in genetics and molecular biology, Vol. 7 (2008) by J. J. Goeman posted to forphd maldi proteomics sagmbcompetition by olberd on 2008-10-23 10:01:14 as
	Serum protein profiling by miniaturized solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry. [My Copy] Rapid communications in mass spectrometry : RCM, Vol. 19, No. 12. (2005), pp. 1578-1586. by A. K. Callesen, S. Mohammed, J. Bunkenborg, et al.T. A. Kruse, S. Cold, O. Mogensen, R. Christensen, W. Vach, P. E. Jørgensen, O. N. Jensen posted to forphd maldi proteomics by olberd on 2008-10-23 09:32:24 as
	Reproducibility of serum protein profiling by systematic assessment using solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry. [My Copy] Rapid communications in mass spectrometry : RCM, Vol. 22, No. 3. (2008), pp. 291-300. by A. K. Callesen, R. Christensen, J. S. Madsen, et al.W. Vach, E. Zapico, S. Cold, P. E. Jørgensen, O. Mogensen, T. A. Kruse, O. N. Jensen posted to forphd maldi proteomics by olberd on 2008-10-23 09:32:10 as
	Combined experimental and statistical strategy for mass spectrometry based serum protein profiling for diagnosis of breast cancer: a case-control study. [My Copy] Journal of proteome research, Vol. 7, No. 4. (April 2008), pp. 1419-1426. by A. K. Callesen, W. Vach, P. E. Jørgensen, et al.S. Cold, Q. Tan, R. Depont Christensen, O. Mogensen, T. A. Kruse, O. N. Jensen, J. S. Madsen posted to forphd maldi proteomics by olberd on 2008-10-23 09:31:51 as along with 1 person BMBatSDU
	Analysis of human serum proteins by liquid phase isoelectric focusing and matrix-assisted laser desorption/ionization-mass spectrometry. [My Copy] Proteomics, Vol. 3, No. 9. (September 2003), pp. 1661-1666. by M. Z. Wang, B. Howard, M. J. Campa, E. F. Patz, M. C. Fitzgerald posted to forphd maldi proteomics by olberd on 2008-10-23 09:27:47 as
	Serum Protein Fingerprinting Coupled with a Pattern-matching Algorithm Distinguishes Prostate Cancer from Benign Prostate Hyperplasia and Healthy Men [My Copy] Cancer Res, Vol. 62, No. 13. (1 July 2002), pp. 3609-3614. by Bao-Ling Adam, Yinsheng Qu, John W. Davis, et al.Michael D. Ward, Mary A. Clements, Lisa H. Cazares, O. John Semmes, Paul F. Schellhammer, Yutaka Yasui, Ziding Feng, George L. Wright posted to forphd maldi proteomics by olberd on 2008-10-23 09:24:28 as along with 2 people and 1 group nedwards jxl EC
	Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer. [My Copy] Clinical chemistry, Vol. 48, No. 8. (August 2002), pp. 1296-1304. by J. Li, Z. Zhang, J. Rosenzweig, Y. Y. Wang, D. W. Chan posted to forphd maldi proteomics by olberd on 2008-10-23 09:23:30 as
	Use of proteomic patterns in serum to identify ovarian cancer [My Copy] The Lancet, Vol. 359, No. 9306. (16 February 2002), pp. 572-577. by E. Petricoiniii, A. Ardekani, B. Hitt, et al.P. Levine, V. Fusaro, S. Steinberg, G. Mills, C. Simone, D. Fishman, E. Kohn posted to forphd maldi proteomics by olberd on 2008-10-23 09:21:29 as along with 2 people nedwards frohike
	Proteomic applications for the early detection of cancer. [My Copy] Nature reviews. Cancer, Vol. 3, No. 4. (April 2003), pp. 267-275. by J. D. Wulfkuhle, L. A. Liotta, E. F. Petricoin posted to forphd maldi proteomics by olberd on 2008-10-23 09:20:28 as along with 1 person thanatosmin

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proteomics	104
maldi	45
forphd	32
statistics	24
software	24
alignment	22
processing	20
quantitation	18
quantification	18
cancer	15
sagmbcompetition	13
biomarker	11
normalization	8
review	8
mse	7
identification	7
serum	6
label-free	6
auc	5
seldi	5
unequal_variance	4
openms	4
overview	4
smoothing	4
labelled	4
wavelet	4
msinspect	3
datalogi	2
silac	2
nosoftware	2
peak_detection	2
itraq	1
msms_tic	1
absolute	1
baseline_correction	1
ovarian	1
deadtime	1
spectral-counting	1

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