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onufriev's McCammon:JA [5 articles] Export

Recent papers posted to onufriev's library by the author McCammon:JA. You can also see everyone's McCammon:JA.

	On the evaluation and optimization of protein X-ray structures for pKa calculations. [My Copy] Protein science : a publication of the Protein Society, Vol. 12, No. 2. (February 2003), pp. 313-326. by J. E. Nielsen, J. A. McCammon posted to pka by onufriev on 2009-05-12 18:50:22 as along with 3 people charris5 softsimu RamuAnandakrishnan
	Molecular dynamics simulations of biomolecules. [My Copy] Nat Struct Biol, Vol. 9, No. 9. (September 2002), pp. 646-652. by M. Karplus, J. A. McCammon posted to molecular_dynamics pedagogical by onufriev on 2009-02-18 21:53:43 as along with 8 people saravan yxue adilson_mohr yalexeev baaden aqeel RamuAnandakrishnan LamBras
	Insight into the role of hydration on protein dynamics. [My Copy] The Journal of chemical physics, Vol. 125, No. 9. (7 September 2006) by D. Hamelberg, T. Shen, J. A. McCammon posted to gb implicit_solvation time_scale by onufriev on 2008-08-14 07:53:52 as along with 1 person pgasper
	Revisiting free energy calculations: a theoretical connection to MM/PBSA and direct calculation of the association free energy. [My Copy] Biophys J, Vol. 86, No. 1 Pt 1. (January 2004), pp. 67-74. by J. M. Swanson, R. H. Henchman, J. A. McCammon posted to drug_design free_energy by onufriev on 2007-10-29 20:19:02 as along with 2 people lillekatt mleis
	Coupling nonpolar and polar solvation free energies in implicit solvent models. [My Copy] J Chem Phys, Vol. 124, No. 8. (28 February 2006) by J. Dzubiella, J. M. Swanson, J. A. McCammon posted to implicit_solvation water_models by onufriev on 2007-10-21 16:56:19 as

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implicit_solvation	60
gb	51
molecular_dynamics	36
nucleosome	36
pb	27
protein_folding	24
pka	22
electrostatics	21
dna	20
dna_bending	19
histone_acetylation	19
dna_electrostatics	15
dna_ions	15
protein_ligand	15
higher_order_chromatin	15
nucleosome_stability	13
nucleosome_assembly	11
beyond_pb	8
water_models	8
ions	8
myoglobin	7
explicit_solvation	7
protein_dynamics	7
protein_electrostatics	7
gb_membrane	7
coarse-grain	6
dna_ab	6
dielectric_in_biopolymers	6
md_dna	5
pedagogical	5
surface	5
dna_nano	5
polyamines	5
phosphorylation	4
drug_design	4
ph	4
multiscale	4
rnai	4
dna_stacking	4
image_charge	3
qmmm	3
rna_sec_structure	3
molecular_geometry	3
water_in_biopolymers	3
physics_philosophy	2
dna_stretching	2
free_energy	2
dna_bend	2
salt_bridge	2
ewald	2
water_molecules	1
protein_stability	1
charge_asymmetry	1
extremophile	1
time_scale	1
nucleosome_positioning	1
physics_fundamentals	1
spermine	1
classical_mechanics	1
dna_md	1
nucleus	1
hnox	1
monte_carlo	1
coarse_grain	1
non_equilibrium_statmech	1
br	1
performance	1
analytical	1

onufriev's McCammon:JA [5 articles] Export

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