onufriev's dna_ions [12 articles] Export

Recent papers added to onufriev's library classified by the tag dna_ions. You can also see everyone's dna_ions.

	Giant charge inversion of a macroion due to multivalent counterions and monovalent coions: Molecular dynamics study [My Copy] The Journal of Chemical Physics, Vol. 115, No. 1. (2001), pp. 567-574. by Motohiko Tanaka, A. Yu Grosberg posted to ions dna_ions by onufriev on 2009-08-13 23:19:20 as
	Attraction between DNA molecules mediated by multivalent ions [My Copy] Physical Review E, Vol. 69, No. 4. (Apr 2004), 041904. by E. Allahyarov, G. Gompper, H. Löwen posted to dna_ions dna_electrostatics dna by onufriev on 2009-08-13 23:12:18 as
	Symmetry breaking and electrostatic attraction between two identical surfaces [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 4. (2009), 041404. by F. Plouraboué, H. C. Chang posted to pb ions dna_ions by onufriev on 2009-08-13 23:05:42 as along with 2 people and 1 group jeevanjyoti sobolevnrm baker-group
	Tracking the intracellular path of poly(ethylenimine)/DNA complexes for gene delivery [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 9. (27 April 1999), pp. 5177-5181. by W. T. Godbey, Kenneth K. Wu, Antonios G. Mikos posted to dna_ions by onufriev on 2009-03-08 00:17:36 as
	DNA Compaction by Divalent Cations: Structural Specificity Revealed by the Potentiality of Designed Quaternary Diammonium Salts [My Copy] ChemBioChem, Vol. 5, No. 3. (2004), pp. 360-368. by Anatoly A. Zinchenko, Vladimir G. Sergeyev, Kuniaki Yamabe, Shizuaki Murata, Kenichi Yoshikawa posted to dna_ions by onufriev on 2009-03-08 00:13:57 as
	ISIM: A Program for Grand Canonical Monte Carlo Simulations of the Ionic Environment of Biomolecules [My Copy] Molecular Simulation, Vol. 30, No. 1. (2004), pp. 45-61. by Andreas Vitalis, Nathan A. Baker, Andrew J. Mccammon posted to dna_ions electrostatics monte_carlo by onufriev on 2009-01-15 01:20:24 as
	Effective potentials for ion--DNA interactions [My Copy] The Journal of Chemical Physics, Vol. 111, No. 24. (1999), pp. 11207-11215. by A. P. Lyubartsev, A. Laaksonen posted to coarse-grain dna_ions by onufriev on 2009-01-04 23:45:59 as along with 2 people Elena_Zubova softsimu
	Cations and Hydration in Catalytic RNA: Molecular Dynamics of the Hepatitis Delta Virus Ribozyme [My Copy] Biophys. J., Vol. 91, No. 2. (15 July 2006), pp. 626-638. by Maryna V. Krasovska, Jana Sefcikova, Kamila Reblova, Bohdan Schneider, Nils G. Walter, Jiri Sponer posted to dna_ions by onufriev on 2008-12-20 22:31:24 as along with 1 person and 1 group sobolevnrm baker-group
	MD simulation of crystal growth of NaCl from its supersaturated aqueous solution [My Copy] Journal of Molecular Liquids, Vol. 118, No. 1-3. (15 April 2005), pp. 131-139. by I. Okada, Y. Namiki, H. Uchida, M. Aizawa, K. Itatani posted to molecular_dynamics dna_ions ions by onufriev on 2008-12-20 02:01:40 as
	Polyelectrolyte electrostatics: Salt dependence, entropic, and enthalpic contributions to free energy in the nonlinear Poisson-Boltzmann model [My Copy] Biopolymers, Vol. 36, No. 2. (1995), pp. 227-243. by Kim A. Sharp posted to dna dna_electrostatics dna_ions by onufriev on 2008-11-23 01:12:18 as along with 1 person Elena_Zubova
	DNA-cation interactions: quo vadis? [My Copy] Chemistry & biology, Vol. 9, No. 3. (March 2002), pp. 277-286. by M. Egli posted to dna dna_electrostatics dna_ions by onufriev on 2008-11-10 21:28:15 as
	DNA and its counterions: a molecular dynamics study. [My Copy] Nucleic Acids Res, Vol. 32, No. 14. (2004), pp. 4269-4280. by P. Várnai, K. Zakrzewska posted to dna dna_electrostatics dna_ions by onufriev on 2008-11-10 21:26:09 as along with 2 people and 1 group Elena_Zubova sobolevnrm baker-group

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implicit_solvation	60
gb	49
molecular_dynamics	36
nucleosome	36
pb	25
protein_folding	24
pka	22
electrostatics	20
dna_bending	19
histone_acetylation	19
dna	18
dna_electrostatics	15
higher_order_chromatin	15
protein_ligand	15
nucleosome_stability	13
dna_ions	12
nucleosome_assembly	11
beyond_pb	8
ions	8
water_models	8
explicit_solvation	7
gb_membrane	7
myoglobin	7
protein_dynamics	7
protein_electrostatics	7
coarse-grain	6
dielectric_in_biopolymers	6
dna_ab	6
dna_nano	5
md_dna	5
pedagogical	5
polyamines	5
surface	5
dna_stacking	4
drug_design	4
multiscale	4
ph	4
phosphorylation	4
rnai	4
image_charge	3
molecular_geometry	3
qmmm	3
rna_sec_structure	3
water_in_biopolymers	3
dna_bend	2
dna_stretching	2
ewald	2
free_energy	2
physics_philosophy	2
br	1
charge_asymmetry	1
classical_mechanics	1
coarse_grain	1
dna_md	1
extremophile	1
hnox	1
monte_carlo	1
non_equilibrium_statmech	1
nucleosome_positioning	1
nucleus	1
performance	1
physics_fundamentals	1
protein_stability	1
time_scale	1
water_molecules	1

onufriev's dna_ions [12 articles] Export

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