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onufriev's dna_stacking [4 articles] Export

Recent papers added to onufriev's library classified by the tag dna_stacking. You can also see everyone's dna_stacking.

	Stabilization energies of the hydrogen-bonded and stacked structures of nucleic acid base pairs in the crystal geometries of CG, AT, and AC DNA stepsand in the NMR geometry of the 5'-d(gcgaagc)-3' hairpin: Complete basis set calculations at the MP2 and CCSD(T) levels [My Copy] by Dabkowska posted to dna_stacking by onufriev on 2008-09-29 12:23:44 as along with 1 person Elena_Zubova
	Benchmark database of accurate (MP2 and CCSD(T) complete basis set limit) interaction energies of small model complexes, DNA base pairs, and amino acid pairs [My Copy] Phys. Chem. Chem. Phys., Vol. 8, No. 17. (2006), pp. 1985-1993. by Petr Jurecka, Jiri Sponer, Jiri Cerny, Pavel Hobza posted to dna_stacking by onufriev on 2008-09-29 12:14:32 as
	How well can new-generation density functional methods describe stacking interactions in biological systems? [My Copy] Phys. Chem. Chem. Phys., Vol. 7, No. 14. (2005), pp. 2701-2705. by Yan Zhao, Donald G. Truhlar posted to dna_stacking dna_stretching by onufriev on 2008-09-29 11:24:07 as
	Direct Measurements of Base Stacking Interactions in DNA by Single-Molecule Atomic-Force Spectroscopy [My Copy] Physical Review Letters, Vol. 99, No. 1. (July 2007), 018302. by C. Ke, M. Humeniuk, H. S-Gracz, P. E. Marszalek posted to dna_bending dna_stacking dna_stretching by onufriev on 2008-09-29 10:57:07 as

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implicit_solvation	60
gb	51
molecular_dynamics	36
nucleosome	36
pb	27
protein_folding	24
pka	22
electrostatics	21
dna	20
dna_bending	19
histone_acetylation	19
dna_electrostatics	15
dna_ions	15
protein_ligand	15
higher_order_chromatin	15
nucleosome_stability	13
nucleosome_assembly	11
beyond_pb	8
water_models	8
ions	8
myoglobin	7
explicit_solvation	7
protein_dynamics	7
protein_electrostatics	7
gb_membrane	7
coarse-grain	6
dna_ab	6
dielectric_in_biopolymers	6
md_dna	5
pedagogical	5
surface	5
dna_nano	5
polyamines	5
phosphorylation	4
drug_design	4
ph	4
multiscale	4
rnai	4
dna_stacking	4
image_charge	3
qmmm	3
rna_sec_structure	3
molecular_geometry	3
water_in_biopolymers	3
physics_philosophy	2
dna_stretching	2
free_energy	2
dna_bend	2
salt_bridge	2
ewald	2
water_molecules	1
protein_stability	1
charge_asymmetry	1
extremophile	1
time_scale	1
nucleosome_positioning	1
physics_fundamentals	1
spermine	1
classical_mechanics	1
dna_md	1
nucleus	1
hnox	1
monte_carlo	1
coarse_grain	1
non_equilibrium_statmech	1
br	1
performance	1
analytical	1

onufriev's dna_stacking [4 articles] Export

onufriev's tags