onufriev's nucleosome [36 articles] Export

Recent papers added to onufriev's library classified by the tag nucleosome. You can also see everyone's nucleosome.

	Identification of histone H3 lysine 36 acetylation as a highly conserved histone modification [My Copy] J. Biol. Chem. (21 December 2006), M607909200. by Stephanie A. Morris, Bhargavi Rao, Benjamin A. Garcia, et al.Sandra B. Hake, Robert L. Diaz, Jeffrey Shabanowitz, Donald F. Hunt, David C. Allis, Jason D. Lieb, Brian D. Strahl posted to histone_acetylation nucleosome by onufriev on 2009-06-17 06:53:14 as
	Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair. [My Copy] Cell, Vol. 127, No. 7. (29 December 2006), pp. 1361-1373. by M. V. Botuyan, J. Lee, I. M. Ward, et al.J. E. Kim, J. R. Thompson, J. Chen, G. Mer posted to histone_acetylation nucleosome by onufriev on 2009-06-14 01:04:59 as along with 1 person DNAReplication
	Tyrosine dephosphorylation of H2AX modulates apoptosis and survival decisions [My Copy] Nature, Vol. 458, No. 7238. (2 April 2009), pp. 591-596. by Peter J. Cook, Bong G. Ju, Francesca Telese, Xiangting Wang, Christopher K. Glass, Michael G. Rosenfeld posted to nucleosome by onufriev on 2009-06-12 00:39:00 as along with 4 people wmatsui fenghezi DevilInPgh paulschlesinger
	Histone H4 lysine 91 acetylation a core domain modification associated with chromatin assembly. [My Copy] Molecular cell, Vol. 18, No. 1. (1 April 2005), pp. 123-130. by J. Ye, X. Ai, E. E. Eugeni, et al.L. Zhang, L. R. Carpenter, M. A. Jelinek, M. A. Freitas, M. R. Parthun posted to histone_acetylation nucleosome nucleosome_assembly by onufriev on 2009-05-31 00:06:24 as
	Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56. [My Copy] Science (New York, N.Y.), Vol. 315, No. 5812. (2 February 2007), pp. 649-652. by R. Driscoll, A. Hudson, S. P. Jackson posted to histone_acetylation nucleosome by onufriev on 2009-05-30 00:36:01 as
	Acetylated Lysine 56 on Histone H3 Drives Chromatin Assembly after Repair and Signals for the Completion of Repair [My Copy] Cell, Vol. 134, No. 2. (25 July 2008), pp. 231-243. by Chin-Chuan Chen, Joshua J. Carson, Jason Feser, et al.Beth Tamburini, Susan Zabaronick, Jeffrey Linger, Jessica K. Tyler posted to higher_order_chromatin histone_acetylation nucleosome nucleosome_assembly by onufriev on 2009-05-30 00:32:42 as along with 2 people vega inesdesantiago
	Histone H3 K56 acetylation, chromatin assembly, and the DNA damage checkpoint [My Copy] DNA Repair, Vol. 7, No. 12. (01 December 2008), pp. 2020-2024. by J. Downs posted to histone_acetylation nucleosome by onufriev on 2009-05-29 04:08:21 as along with 1 person gderwin
	A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response [My Copy] Nature, Vol. 436, No. 7048., pp. 294-298. by Hiroshi Masumoto, David Hawke, Ryuji Kobayashi, Alain Verreault posted to histone_acetylation nucleosome by onufriev on 2009-05-29 04:04:12 as along with 1 person gderwin
	Identification of acetylation and methylation sites of histone H3 from chicken erythrocytes by high-accuracy matrix-assisted laser desorption ionization-time-of-flight, matrix-assisted laser desorption ionization-postsource decay, and nanoelectrospray ionization tandem mass spectrometry. [My Copy] Analytical biochemistry, Vol. 306, No. 2. (15 July 2002), pp. 259-269. by K. Zhang, H. Tang, L. Huang, et al.J. W. Blankenship, P. R. Jones, F. Xiang, P. M. Yau, A. L. Burlingame posted to histone_acetylation nucleosome by onufriev on 2009-05-27 06:23:58 as
	Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association. [My Copy] Genes & development, Vol. 16, No. 12. (15 June 2002), pp. 1518-1527. by H. H. Ng, Q. Feng, H. Wang, et al.H. Erdjument-Bromage, P. Tempst, Y. Zhang, K. Struhl posted to nucleosome by onufriev on 2009-05-27 06:21:25 as
	Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail [My Copy] Journal of Molecular Biology, Vol. 327, No. 1. (14 March 2003), pp. 85-96. by B. Dorigo posted to higher_order_chromatin histone_acetylation nucleosome by onufriev on 2009-05-27 05:59:02 as
	How does the histone code work? [My Copy] Biochemistry and cell biology = Biochimie et biologie cellulaire, Vol. 83, No. 4. (August 2005), pp. 468-476. by M. S. Cosgrove, C. Wolberger posted to histone_acetylation nucleosome nucleosome_stability by onufriev on 2009-05-23 07:11:25 as
	Regulated nucleosome mobility and the histone code [My Copy] Nature Structural & Molecular Biology, Vol. 11, No. 11. (02 November 2004), 1037. by Michael S. Cosgrove, Jef D. Boeke, Cynthia Wolberger posted to nucleosome nucleosome_stability by onufriev on 2009-05-23 07:06:58 as along with 1 person afenley
	Nucleosome destabilization in the epigenetic regulation of gene expression [My Copy] Nat Rev Genet, Vol. 9, No. 1. (4 January 2008), pp. 15-26. by Steven Henikoff posted to histone_acetylation nucleosome nucleosome_stability by onufriev on 2009-05-23 06:55:56 as along with 4 people inesdesantiago tonamswish Petersarkies dchughes
	Cellular memory and the histone code. [My Copy] Cell, Vol. 111, No. 3. (1 November 2002), pp. 285-291. by B. M. Turner posted to higher_order_chromatin histone_acetylation nucleosome by onufriev on 2009-05-23 06:29:03 as
	Epigenetic nucleosomes: Alu sequences and CG as nucleosome positioning element. [My Copy] Journal of biomolecular structure & dynamics, Vol. 26, No. 1. (August 2008), pp. 9-16. by F. Salih, B. Salih, S. Kogan, E. N. Trifonov posted to nucleosome nucleosome_assembly nucleosome_positioning by onufriev on 2009-03-30 00:49:03 as along with 1 person rschulz
	DNA Bendability and Nucleosome Positioning in Transcriptional Regulation [My Copy] DNA Conformation and Transcription (2005), pp. 189-202. by Mensur Dlakić, David W. Ussery, Søren Brunak posted to dna_bending nucleosome nucleosome_stability by onufriev on 2009-03-30 00:43:37 as
	The physics of chromatin [My Copy] Journal of Physics: Condensed Matter, Vol. 15, No. 19. (2003), pp. R699-R774. by Helmut Schiessel posted to higher_order_chromatin nucleosome nucleosome_stability by onufriev on 2009-01-02 01:36:52 as
	Polyamines and acetylpolyamines increase the stability and alter the conformation of nucleosome core particles. [My Copy] Biochemistry, Vol. 26, No. 12. (16 June 1987), pp. 3643-3649. by J. E. Morgan, J. W. Blankenship, H. R. Matthews posted to nucleosome nucleosome_stability polyamines by onufriev on 2008-12-13 06:04:32 as
	Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. [My Copy] Cell, Vol. 134, No. 1. (11 July 2008), pp. 74-84. by S. J. Petesch, J. T. Lis posted to higher_order_chromatin nucleosome nucleosome_assembly by onufriev on 2008-12-10 20:13:27 as
	Coarse-grained force field for the nucleosome from self-consistent multiscaling [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA. by Karine Voltz, Joanna Trylska, Valentina Tozzini, Vandana Kurkal-Siebert, Jörg Langowski, Jeremy Smith posted to molecular_dynamics multiscale nucleosome by onufriev on 2008-06-16 23:43:03 as along with 3 people barmak7282 Elena_Zubova RamuAnandakrishnan
	Charge environments around phosphorylation sites in proteins [My Copy] BMC Structural Biology, Vol. 8 (25 March 2008), 19. by James Kitchen, Rebecca E. Saunders, Jim Warwicker posted to nucleosome phosphorylation protein_electrostatics by onufriev on 2008-04-16 20:30:29 as along with 1 person henryk69
	Effect of Phosphorylation on α-Helix Stability as a Function of Position [My Copy] Biochemistry, Vol. 41, No. 6. (12 February 2002), pp. 1897-1905. by C. D. Andrew, J. Warwicker, G. R. Jones, A. J. Doig posted to nucleosome phosphorylation by onufriev on 2008-04-16 20:29:14 as
	Nucleosome stability mediated by histone variants H3.3 and H2A.Z [My Copy] Genes Dev., Vol. 21, No. 12. (15 June 2007), pp. 1519-1529. by Chunyuan Jin, Gary Felsenfeld posted to nucleosome nucleosome_stability by onufriev on 2007-12-11 22:00:08 as along with 1 person sebastien_vigneau
	Acetylation in Histone H3 Globular Domain Regulates Gene Expression in Yeast [My Copy] Cell, Vol. 121, No. 3. (6 May 2005), pp. 375-385. by Feng Xu, Kangling Zhang, Michael Grunstein posted to histone_acetylation nucleosome by onufriev on 2007-11-30 21:13:32 as
	Sir2 Deacetylates Histone H3 Lysine 56 to Regulate Telomeric Heterochromatin Structure in Yeast [My Copy] Molecular Cell, Vol. 27, No. 6. (21 September 2007), pp. 890-900. by Feng Xu, Qiongyi Zhang, Kangling Zhang, Wei Xie, Michael Grunstein posted to histone_acetylation nucleosome by onufriev on 2007-11-29 22:50:19 as along with 2 people gderwin zhlei
	Regulation of nucleosome stability as a mediator of chromatin function [My Copy] Current Opinion in Genetics & Development In Chromosomes and expression mechanisms, Vol. 16, No. 2. (April 2006), pp. 171-176. by Paul G. Giresi, Mayetri Gupta, Jason D. Lieb posted to histone_acetylation nucleosome nucleosome_stability by onufriev on 2007-11-12 23:35:44 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	Long-range histone acetylation: biological significance, structural implications, and mechanisms [My Copy] Biochem. Cell Biol., Vol. 84, No. 4. (2006), pp. 518-527. posted to histone_acetylation nucleosome nucleosome_assembly by onufriev on 2007-11-12 17:02:02 as
	Intracellular pH in one-cell mouse embryo differs between subcellular compartments and between interphase and mitosis [My Copy] Biology of the Cell, Vol. 92, No. 6. (September 2000), pp. 409-419. by Claudine Amirand, Pascale Mentre, Sjoerd van de Geijn, Malgorzata Waksmundzka, Pascale Debey posted to nucleosome nucleus ph by onufriev on 2007-11-12 16:19:08 as
	Specific Contributions of Histone Tails and their Acetylation to the Mechanical Stability of Nucleosomes [My Copy] Journal of Molecular Biology, Vol. 346, No. 1. (11 February 2005), pp. 135-146. by Brent Brower-Toland, David A. Wacker, Robert M. Fulbright, John T. Lis, Lee W. Kraus, Michelle D. Wang posted to nucleosome nucleosome_assembly by onufriev on 2007-11-11 04:07:57 as
	Chromatin assembly and organization [My Copy] J Cell Sci, Vol. 114, No. 15. (1 August 2001), pp. 2711-2712. by Patricia Ridgway, Genevieve Almouzni posted to higher_order_chromatin nucleosome nucleosome_assembly by onufriev on 2007-11-10 21:04:18 as
	Split Decision: What Happens to Nucleosomes during DNA Replication? [My Copy] J. Biol. Chem., Vol. 280, No. 13. (1 April 2005), pp. 12065-12068. by Anthony T. Annunziato posted to nucleosome nucleosome_assembly by onufriev on 2007-11-10 20:48:35 as
	Polyamine-dependent gene expression. [My Copy] Cell Mol Life Sci, Vol. 60, No. 7. (July 2003), pp. 1394-1406. by A. C. Childs, D. J. Mehta, E. W. Gerner posted to higher_order_chromatin nucleosome polyamines by onufriev on 2007-11-09 06:11:16 as
	High concentration of DNA in condensed chromatin [My Copy] by Daban J-R posted to higher_order_chromatin nucleosome by onufriev on 2007-11-08 23:20:46 as
	Histone-DNA Binding Free Energy Cannot Be Measured in Dilution-Driven Dissociation Experiments [My Copy] Biochemistry, Vol. 43, No. 3. (27 January 2004), pp. 736-741. by A. Thastrom, J. M. Gottesfeld, K. Luger, J. Widom posted to nucleosome by onufriev on 2007-10-30 03:05:37 as
	From the Cover: Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA [My Copy] Proceedings of the National Academy of Sciences, Vol. 99, No. 4. (19 February 2002), pp. 1960-1965. by Brent D. Brower-Toland, Corey L. Smith, Richard C. Yeh, John T. Lis, Craig L. Peterson, Michelle D. Wang posted to nucleosome by onufriev on 2007-10-30 01:48:03 as along with 1 person afenley

Note: You may cite this page as: http://www.citeulike.org/user/onufriev/tag/nucleosome

implicit_solvation	60
gb	49
molecular_dynamics	36
nucleosome	36
pb	25
protein_folding	24
pka	22
electrostatics	20
dna_bending	19
histone_acetylation	19
dna	18
dna_electrostatics	15
higher_order_chromatin	15
protein_ligand	15
nucleosome_stability	13
dna_ions	12
nucleosome_assembly	11
beyond_pb	8
ions	8
water_models	8
explicit_solvation	7
gb_membrane	7
myoglobin	7
protein_dynamics	7
protein_electrostatics	7
coarse-grain	6
dielectric_in_biopolymers	6
dna_ab	6
dna_nano	5
md_dna	5
pedagogical	5
polyamines	5
surface	5
dna_stacking	4
drug_design	4
multiscale	4
ph	4
phosphorylation	4
rnai	4
image_charge	3
molecular_geometry	3
qmmm	3
rna_sec_structure	3
water_in_biopolymers	3
dna_bend	2
dna_stretching	2
ewald	2
free_energy	2
physics_philosophy	2
br	1
charge_asymmetry	1
classical_mechanics	1
coarse_grain	1
dna_md	1
extremophile	1
hnox	1
monte_carlo	1
non_equilibrium_statmech	1
nucleosome_positioning	1
nucleus	1
performance	1
physics_fundamentals	1
protein_stability	1
time_scale	1
water_molecules	1

onufriev's nucleosome [36 articles] Export

onufriev's tags